RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 TLE6Q9H808 572 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 SAR1AQ9NR31 198 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 MAP3K6O95382 1288 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 SLC12A3P55017 1021 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 ARMCX4Q5H9R4 360 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 C1orf186Q6ZWK4 172 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 C7orf61Q8IZ16 206 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 C19orf60Q96EN9 201 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 MTMR9Q96QG7 549 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 CCDC3Q9BQI4 270 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 C2orf49Q9BVC5 232 aaPredicted RBP13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 STK39Q9UEW8 545 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 SLIT3O75094 1523 aa13.58□□□□□ -0.23
SMARCA4-216ENST00000591545 TPST1O60507 370 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 MMP3P08254 477 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 SLC6A3Q01959 620 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 SLC34A1Q06495 639 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 CYP51A1Q16850 503 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 ZBTB49Q6ZSB9 765 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 RD3Q7Z3Z2 195 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 FBXO22Q8NEZ5 403 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 PPP1R13LQ8WUF5 828 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 C18orf25Q96B23 403 aaPredicted RBP13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 ULBP1Q9BZM6 244 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 FAM105AQ9NUU6 356 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 DNMT3LQ9UJW3 386 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 NAALADL1Q9UQQ1 740 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 STARD13Q9Y3M8 1113 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 HMGB3O15347 200 aaKnown RBP13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 ASGR1P07306 291 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 GLI1P08151 1106 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 PTPN3P26045 913 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 NFIL3Q16649 462 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 ATP6AP1LQ52LC2 224 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 STRA8Q7Z7C7 330 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 TDRD5Q8NAT2 981 aaKnown RBP13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 CDT1Q9H211 546 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 KCND1Q9NSA2 647 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 USE1Q9NZ43 259 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 MOXD2PA6NHM9 499 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 OR6C75A6NL08 312 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 DNALI1O14645 258 aaPredicted RBP13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 CNOT3O75175 753 aaKnown RBP13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 GLP2RO95838 553 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 THOP1P52888 689 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 BCL2L1Q07817 233 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 KCNA10Q16322 511 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 C6orf203Q9P0P8 240 aaPredicted RBP13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 COPG2Q9UBF2 871 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 UBA2Q9UBT2 640 aaPredicted RBP13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 INHAP05111 366 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 TBL3Q12788 808 aaKnown RBP13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 NCF4Q15080 339 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 FBXL19Q6PCT2 694 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 TMC3Q7Z5M5 1100 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 TRAPPC9Q96Q05 1148 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 BTBD10Q9BSF8 475 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 RNPEPQ9H4A4 650 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 IARS2Q9NSE4 1012 aaKnown RBP13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 POLG2Q9UHN1 485 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 C2CD2Q9Y426 696 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 V9GYQ6 96 aa13.58□□□□□ -0.24
SMARCA4-216ENST00000591545 ANKRD63C9JTQ0 380 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 CAPSQ13938 189 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 EARS2Q5JPH6 523 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 TPGS1Q6ZTW0 290 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 KIAA0895Q8NCT3 520 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 AENQ8WTP8 325 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 APOPT1Q96IL0 206 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 PRDM16Q9HAZ2 1276 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 COMMD8Q9NX08 183 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 RABGEF1Q9UJ41 708 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 HES2Q9Y543 173 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 PHLPP1O60346 1717 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 UBDO15205 165 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 ATP9AO75110 1047 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 FGF19O95750 216 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 USP17L7P0C7H9 530 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 TPBGLP0DKB5 382 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 ALADP13716 330 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 CCDC130P13994 396 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 BGNP21810 368 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 MRC1P22897 1456 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 TKTP29401 623 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 CYP2C18P33260 490 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 KRT78Q8N1N4 520 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 IL31RAQ8NI17 732 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 CASP10Q92851 521 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 LPPQ93052 612 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 OMDQ99983 421 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 SHCBP1LQ9BZQ2 653 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 ENOPH1Q9UHY7 261 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 SESN1Q9Y6P5 492 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 TRIM24O15164 1050 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 FASP25445 335 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 RXRGP48443 463 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 NUMBP49757 651 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 GRTP1Q5TC63 336 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 MCOLN2Q8IZK6 566 aa13.57□□□□□ -0.24
SMARCA4-216ENST00000591545 SVOPQ8N4V2 548 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms