RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 THBS4P35443 961 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 GPC5P78333 572 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 ID2Q02363 134 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 ZNF91Q05481 1191 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 GALNTL6Q49A17 601 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 RNASE12Q5GAN4 147 aaKnown RBP3.89□□□□□ -1.79
SMAD4-207ENST00000589076 DAB2IPQ5VWQ8 1189 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 ANKRD40Q6AI12 368 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 DGAT2L7PQ6IED9 249 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 RASGRP2Q7LDG7 609 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 ANKRD13BQ86YJ7 626 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 TMEM57Q8N5G2 664 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 IL17REQ8NFR9 667 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 OR52L2PQ8NGH6 319 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 NPIPB3Q92617 1050 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 RILPL2Q969X0 211 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 EDC3Q96F86 508 aaKnown RBP3.89□□□□□ -1.79
SMAD4-207ENST00000589076 MECRQ9BV79 373 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 UBA5Q9GZZ9 404 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 CHODLQ9H9P2 273 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 RASSF1Q9NS23 344 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 GJD2Q9UKL4 321 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 FZD4Q9ULV1 537 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 MAFFQ9ULX9 164 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 SLC12A4Q9UP95 1085 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 DERAQ9Y315 318 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 SPATA31A1Q5TZJ5 1347 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 ZMYM2Q9UBW7 1377 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 TBC1D3DA0A087WVF3 549 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 TBC1D3IA0A087WXS9 549 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 TBC1D3EA0A087X179 549 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 TBC1D3KA0A087X1G2 549 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 TBC1D3BA6NDS4 549 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 TBC1D3FA6NER0 549 aaPredicted RBP3.88□□□□□ -1.79
SMAD4-207ENST00000589076 FAM90A20PA6NIJ5 464 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 TBC1D3LB9A6J9 549 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 SEPT4O43236 478 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 KRT38O76015 456 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 TBC1D3HP0C7X1 549 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 GALNSP34059 522 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 HTR6P50406 440 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 JAK3P52333 1124 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 RBM5P52756 815 aaKnown RBP eCLIP3.88□□□□□ -1.79
SMAD4-207ENST00000589076 COPB1P53618 953 aaKnown RBP3.88□□□□□ -1.79
SMAD4-207ENST00000589076 RPL15P61313 204 aaKnown RBP3.88□□□□□ -1.79
SMAD4-207ENST00000589076 TLE2Q04725 743 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 TLE3Q04726 772 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 DCTN1Q14203 1278 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 TBC1D3GQ6DHY5 549 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 TBC1D3CQ6IPX1 549 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 WDR93Q6P2C0 686 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 C16orf89Q6UX73 402 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 SYT13Q7L8C5 426 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 ADHFE1Q8IWW8 467 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 C16orf71Q8IYS4 520 aaPredicted RBP3.88□□□□□ -1.79
SMAD4-207ENST00000589076 TBC1D3Q8IZP1 549 aaPredicted RBP3.88□□□□□ -1.79
SMAD4-207ENST00000589076 LINC01465Q8N7H1 131 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 USP38Q8NB14 1042 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 HERVK_113Q902F9 699 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 MAELQ96JY0 434 aaKnown RBP3.88□□□□□ -1.79
SMAD4-207ENST00000589076 COG8Q96MW5 612 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 SIGLEC11Q96RL6 698 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 ABHD16BQ9H3Z7 469 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 ABHD10Q9NUJ1 306 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 SEMA5BQ9P283 1151 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 KCND3Q9UK17 655 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 SLC13A4Q9UKG4 626 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 PROCRQ9UNN8 238 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 PCDHB2Q9Y5E7 798 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 HS3ST3B1Q9Y662 390 aa3.88□□□□□ -1.79
SMAD4-207ENST00000589076 A0A1B0GVC2 190 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 RRN3P2A6NIE6 340 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 MBD3L5A6NJ08 208 aaPredicted RBP3.87□□□□□ -1.79
SMAD4-207ENST00000589076 C3orf70A6NLC5 250 aaPredicted RBP3.87□□□□□ -1.79
SMAD4-207ENST00000589076 B4DGG1 531 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 M0QYT0 321 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 HNRNPRO43390 633 aaKnown RBP3.87□□□□□ -1.79
SMAD4-207ENST00000589076 KRT86O43790 486 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 PRAMEF2O60811 474 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 WDHD1O75717 1129 aaPredicted RBP3.87□□□□□ -1.79
SMAD4-207ENST00000589076 MT-CO3P00414 261 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 MBPP02686 304 aaPredicted RBP3.87□□□□□ -1.79
SMAD4-207ENST00000589076 PSG1P11464 419 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 RXRAP19793 462 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 FPR3P25089 353 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 MT3P25713 68 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 GRK5P34947 590 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 CDKN2AP42771 156 aaKnown RBP3.87□□□□□ -1.79
SMAD4-207ENST00000589076 PCP4P48539 62 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 HYAL1Q12794 435 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 KRT81Q14533 505 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 ANKRD1Q15327 319 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 KRTAP27-1Q3LI81 207 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 CTXN3Q4LDR2 81 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 INTS11Q5TA45 600 aaKnown RBP3.87□□□□□ -1.79
SMAD4-207ENST00000589076 TMEM88Q6PEY1 159 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 BCDIN3DQ7Z5W3 292 aaKnown RBP3.87□□□□□ -1.79
SMAD4-207ENST00000589076 LRRTM4Q86VH4 590 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 ARFGAP1Q8N6T3 406 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 FSIP1Q8NA03 581 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms