RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 VRTNQ9H8Y1 702 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 RAVER2Q9HCJ3 691 aaKnown RBP6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 HPS4Q9NQG7 708 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 WHRNQ9P202 907 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 EIF3KQ9UBQ5 218 aaKnown RBP6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 FETUBQ9UGM5 382 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 ZNF229Q9UJW7 825 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 PTPRFP10586 1907 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 ARHGEF37A1IGU5 675 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 C2orf71A6NGG8 1288 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 LEUTXA8MZ59 168 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 BTN3A1O00481 513 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 CTDSP2O14595 271 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 NOL3O60936 208 aaKnown RBP6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 SORBS2O94875 1100 aaKnown RBP6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 NTRK1P04629 796 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 CALB1P05937 261 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 GYS1P13807 737 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 CHRNB2P17787 502 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 CTNNA2P26232 953 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 MAP4P27816 1152 aaKnown RBP6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 EPHB1P54762 984 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 TMBIM6P55061 237 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 SNX16P57768 344 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 SLC25A3Q00325 362 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 NR5A1Q13285 461 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 RAPGEF1Q13905 1077 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 CTTNQ14247 550 aaKnown RBP6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 AASDHQ4L235 1098 aaPredicted RBP6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 ATAD3CQ5T2N8 411 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 ATF7IP2Q5U623 682 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 CACHD1Q5VU97 1274 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 ARL6IP4Q66PJ3 421 aaKnown RBP6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 ARHGAP36Q6ZRI8 547 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 TOM1L2Q6ZVM7 507 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 ATG9AQ7Z3C6 839 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 DPP9Q86TI2 863 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 PRPF39Q86UA1 669 aaKnown RBP6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 TSPYL5Q86VY4 417 aaPredicted RBP6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 TDRPQ86YL5 185 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 RIOX2Q8IUF8 465 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 HID1Q8IV36 788 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 ZFPM1Q8IX07 1006 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 CCDC105Q8IYK2 499 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 HIPK4Q8NE63 616 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 VANGL1Q8TAA9 524 aaPredicted RBP6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 TEX47Q8TBZ9 253 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 PHOSPHO2Q8TCD6 241 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 SLC10A4Q96EP9 437 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 EEF2KMTQ96G04 330 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 ASB2Q96Q27 587 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 TRIM56Q9BRZ2 755 aaKnown RBP6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 OSBPL11Q9BXB4 747 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 VPS11Q9H270 941 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 MANSC1Q9H8J5 431 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 SSU72Q9NP77 194 aaKnown RBP6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 ZC4H2Q9NQZ6 224 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 CNNM1Q9NRU3 951 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 HOMER2Q9NSB8 354 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 ACOXLQ9NUZ1 547 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 PPP1R14DQ9NXH3 145 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 TRPM5Q9NZQ8 1165 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 MBD2Q9UBB5 411 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 ARPP21Q9UBL0 812 aaPredicted RBP6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 CDH22Q9UJ99 828 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 BOLA1Q9Y3E2 137 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 KIF13BQ9NQT8 1826 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 NRCAMQ92823 1304 aa6.62□□□□□ -1.35
AP000547.3-204ENST00000588548 C7orf72A4D263 438 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 UBE2Q2LH0YL09 131 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 PDHXO00330 501 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 RAD51BO15315 384 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 SERPINI2O75830 405 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 NOL4O94818 638 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 KCNK2O95069 426 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 ZNF26P17031 533 aaPredicted RBP6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 NELFEP18615 380 aaKnown RBP6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 IMPDH1P20839 514 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 GCAP28676 217 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 SSTR3P32745 418 aaPredicted RBP6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 HTR7P34969 479 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 SOX5P35711 763 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 IL6STP40189 918 aaPredicted RBP6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 GP5P40197 560 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 NDST1P52848 882 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 PRKAA2P54646 552 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 SSRP1Q08945 709 aaKnown RBP6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 SEMA3AQ14563 771 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 MFSD13AQ14CX5 517 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 ALX1Q15699 326 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 UBE2SQ16763 222 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 MDH1BQ5I0G3 518 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 BRMS1LQ5PSV4 323 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 VARS2Q5ST30 1063 aaKnown RBP6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 FAM83BQ5T0W9 1011 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 ARMC4Q5T2S8 1044 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 KRT80Q6KB66 452 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 DCUN1D2Q6PH85 259 aa6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 RALYLQ86SE5 291 aaKnown RBP6.61□□□□□ -1.35
AP000547.3-204ENST00000588548 CATSPER3Q86XQ3 398 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms