RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 USP34Q70CQ2 3546 aa20.82■□□□□ 0.92
DDX39A-207ENST00000588542 NYNRINQ9P2P1 1898 aaKnown RBP20.81■□□□□ 0.92
DDX39A-207ENST00000588542 WASH3PC4AMC7 463 aa20.81■□□□□ 0.92
DDX39A-207ENST00000588542 LRCH4O75427 683 aa20.81■□□□□ 0.92
DDX39A-207ENST00000588542 CLDN11O75508 207 aa20.81■□□□□ 0.92
DDX39A-207ENST00000588542 DESP17661 470 aa20.81■□□□□ 0.92
DDX39A-207ENST00000588542 WASP42768 502 aa20.81■□□□□ 0.92
DDX39A-207ENST00000588542 ENPP2Q13822 863 aa20.81■□□□□ 0.92
DDX39A-207ENST00000588542 CRY1Q16526 586 aa20.81■□□□□ 0.92
DDX39A-207ENST00000588542 EOGTQ5NDL2 527 aa20.81■□□□□ 0.92
DDX39A-207ENST00000588542 CYP4V2Q6ZWL3 525 aaPredicted RBP20.81■□□□□ 0.92
DDX39A-207ENST00000588542 CCDC117Q8IWD4 279 aaPredicted RBP20.81■□□□□ 0.92
DDX39A-207ENST00000588542 PYROXD2Q8N2H3 581 aa20.81■□□□□ 0.92
DDX39A-207ENST00000588542 UCMAQ8WVF2 138 aa20.81■□□□□ 0.92
DDX39A-207ENST00000588542 CTNNBL1Q8WYA6 563 aaPredicted RBP20.81■□□□□ 0.92
DDX39A-207ENST00000588542 TTC17Q96AE7 1141 aa20.81■□□□□ 0.92
DDX39A-207ENST00000588542 HHIPQ96QV1 700 aa20.81■□□□□ 0.92
DDX39A-207ENST00000588542 PEBP4Q96S96 227 aa20.81■□□□□ 0.92
DDX39A-207ENST00000588542 GABRG3Q99928 467 aa20.81■□□□□ 0.92
DDX39A-207ENST00000588542 IRF2BPLQ9H1B7 796 aa20.81■□□□□ 0.92
DDX39A-207ENST00000588542 CD248Q9HCU0 757 aa20.81■□□□□ 0.92
DDX39A-207ENST00000588542 FAM86C1Q9NVL1 165 aa20.81■□□□□ 0.92
DDX39A-207ENST00000588542 CACNA2D2Q9NY47 1150 aa20.81■□□□□ 0.92
DDX39A-207ENST00000588542 PPARGC1AQ9UBK2 798 aaKnown RBP20.81■□□□□ 0.92
DDX39A-207ENST00000588542 ZNF212Q9UDV6 495 aa20.81■□□□□ 0.92
DDX39A-207ENST00000588542 ANAPC7Q9UJX3 599 aa20.81■□□□□ 0.92
DDX39A-207ENST00000588542 TBC1D30Q9Y2I9 924 aa20.81■□□□□ 0.92
DDX39A-207ENST00000588542 RNF8O76064 485 aa20.8■□□□□ 0.92
DDX39A-207ENST00000588542 TMEM253P0C7T8 217 aa20.8■□□□□ 0.92
DDX39A-207ENST00000588542 MZF1P28698 734 aaPredicted RBP20.8■□□□□ 0.92
DDX39A-207ENST00000588542 MIPP30301 263 aa20.8■□□□□ 0.92
DDX39A-207ENST00000588542 CSKP41240 450 aa20.8■□□□□ 0.92
DDX39A-207ENST00000588542 IL12RB1P42701 662 aa20.8■□□□□ 0.92
DDX39A-207ENST00000588542 AIF1P55008 147 aa20.8■□□□□ 0.92
DDX39A-207ENST00000588542 NHLH1Q02575 133 aa20.8■□□□□ 0.92
DDX39A-207ENST00000588542 ZNF234Q14588 700 aa20.8■□□□□ 0.92
DDX39A-207ENST00000588542 ACAP1Q15027 740 aa20.8■□□□□ 0.92
DDX39A-207ENST00000588542 PTPRNQ16849 979 aa20.8■□□□□ 0.92
DDX39A-207ENST00000588542 PITRM1Q5JRX3 1037 aa20.8■□□□□ 0.92
DDX39A-207ENST00000588542 DAB2IPQ5VWQ8 1189 aa20.8■□□□□ 0.92
DDX39A-207ENST00000588542 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.8■□□□□ 0.92
DDX39A-207ENST00000588542 CHPFQ8IZ52 775 aa20.8■□□□□ 0.92
DDX39A-207ENST00000588542 APCDD1Q8J025 514 aa20.8■□□□□ 0.92
DDX39A-207ENST00000588542 CAMKK1Q8N5S9 505 aa20.8■□□□□ 0.92
DDX39A-207ENST00000588542 NIPA2Q8N8Q9 360 aa20.8■□□□□ 0.92
DDX39A-207ENST00000588542 ZBTB44Q8NCP5 570 aa20.8■□□□□ 0.92
DDX39A-207ENST00000588542 ZNF564Q8TBZ8 553 aaPredicted RBP20.8■□□□□ 0.92
DDX39A-207ENST00000588542 CYB5D2Q8WUJ1 264 aa20.8■□□□□ 0.92
DDX39A-207ENST00000588542 ATOH1Q92858 354 aaPredicted RBP20.8■□□□□ 0.92
DDX39A-207ENST00000588542 ALG14Q96F25 216 aa20.8■□□□□ 0.92
DDX39A-207ENST00000588542 FAM126AQ9BYI3 521 aaPredicted RBP20.8■□□□□ 0.92
DDX39A-207ENST00000588542 IMPACTQ9P2X3 320 aa20.8■□□□□ 0.92
DDX39A-207ENST00000588542 STON1Q9Y6Q2 735 aa20.8■□□□□ 0.92
DDX39A-207ENST00000588542 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.79■□□□□ 0.92
DDX39A-207ENST00000588542 A0A1W2PQF6 199 aa20.79■□□□□ 0.92
DDX39A-207ENST00000588542 NPC1O15118 1278 aa20.79■□□□□ 0.92
DDX39A-207ENST00000588542 LRIG2O94898 1065 aa20.79■□□□□ 0.92
DDX39A-207ENST00000588542 LCA5LO95447 670 aa20.79■□□□□ 0.92
DDX39A-207ENST00000588542 POLR2EP19388 210 aaKnown RBP20.79■□□□□ 0.92
DDX39A-207ENST00000588542 PXNP49023 591 aaPredicted RBP20.79■□□□□ 0.92
DDX39A-207ENST00000588542 FNTBP49356 437 aa20.79■□□□□ 0.92
DDX39A-207ENST00000588542 PLK1P53350 603 aa20.79■□□□□ 0.92
DDX39A-207ENST00000588542 SEMA3BQ13214 749 aa20.79■□□□□ 0.92
DDX39A-207ENST00000588542 ZNF177Q13360 481 aaPredicted RBP20.79■□□□□ 0.92
DDX39A-207ENST00000588542 SLC12A1Q13621 1099 aa20.79■□□□□ 0.92
DDX39A-207ENST00000588542 PLEKHG6Q3KR16 790 aa20.79■□□□□ 0.92
DDX39A-207ENST00000588542 EFHC2Q5JST6 749 aa20.79■□□□□ 0.92
DDX39A-207ENST00000588542 CCDC170Q8IYT3 715 aa20.79■□□□□ 0.92
DDX39A-207ENST00000588542 SPC24Q8NBT2 197 aa20.79■□□□□ 0.92
DDX39A-207ENST00000588542 ZYG11BQ9C0D3 744 aa20.79■□□□□ 0.92
DDX39A-207ENST00000588542 ZSCAN32Q9NX65 697 aa20.79■□□□□ 0.92
DDX39A-207ENST00000588542 UVRAGQ9P2Y5 699 aa20.79■□□□□ 0.92
DDX39A-207ENST00000588542 PCSK1NQ9UHG2 260 aa20.79■□□□□ 0.92
DDX39A-207ENST00000588542 OR51B4Q9Y5P0 310 aa20.79■□□□□ 0.92
DDX39A-207ENST00000588542 DLDP09622 509 aaKnown RBP20.78■□□□□ 0.92
DDX39A-207ENST00000588542 HOXB2P14652 356 aa20.78■□□□□ 0.92
DDX39A-207ENST00000588542 TCF4P15884 667 aa20.78■□□□□ 0.92
DDX39A-207ENST00000588542 L1CAMP32004 1257 aa20.78■□□□□ 0.92
DDX39A-207ENST00000588542 PCK1P35558 622 aa20.78■□□□□ 0.92
DDX39A-207ENST00000588542 DGKEP52429 567 aa20.78■□□□□ 0.92
DDX39A-207ENST00000588542 NRLP54845 237 aa20.78■□□□□ 0.92
DDX39A-207ENST00000588542 PIGHQ14442 188 aaPredicted RBP20.78■□□□□ 0.92
DDX39A-207ENST00000588542 HEATR6Q6AI08 1181 aaKnown RBP20.78■□□□□ 0.92
DDX39A-207ENST00000588542 TFAP2DQ7Z6R9 452 aa20.78■□□□□ 0.92
DDX39A-207ENST00000588542 MYO19Q96H55 970 aa20.78■□□□□ 0.92
DDX39A-207ENST00000588542 SNRNP25Q9BV90 132 aaKnown RBP20.78■□□□□ 0.92
DDX39A-207ENST00000588542 GPATCH2LQ9NWQ4 482 aa20.78■□□□□ 0.92
DDX39A-207ENST00000588542 CTTNBP2NLQ9P2B4 639 aa20.78■□□□□ 0.92
DDX39A-207ENST00000588542 IP6K2Q9UHH9 426 aa20.78■□□□□ 0.92
DDX39A-207ENST00000588542 R4GN57 208 aa20.78■□□□□ 0.92
DDX39A-207ENST00000588542 PLXND1Q9Y4D7 1925 aa20.78■□□□□ 0.92
DDX39A-207ENST00000588542 NUP205Q92621 2012 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 SOWAHDA6NJG2 315 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 APBB3O95704 486 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 ATP5BP06576 529 aaKnown RBP20.77■□□□□ 0.92
DDX39A-207ENST00000588542 PRKCHP24723 683 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 IL1R2P27930 398 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 CTSOP43234 321 aaPredicted RBP20.77■□□□□ 0.92
DDX39A-207ENST00000588542 NUMBP49757 651 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 OXCT1P55809 520 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms