RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 IGSF8Q969P0 613 aa19.81■□□□□ 0.76
CIRBP-217ENST00000588230 VCPIP1Q96JH7 1222 aa19.81■□□□□ 0.76
CIRBP-217ENST00000588230 LMLNQ96KR4 655 aa19.81■□□□□ 0.76
CIRBP-217ENST00000588230 ARRDC1-AS1Q9H2J1 176 aa19.81■□□□□ 0.76
CIRBP-217ENST00000588230 ANLNQ9NQW6 1124 aa19.81■□□□□ 0.76
CIRBP-217ENST00000588230 TAS2R14Q9NYV8 317 aa19.81■□□□□ 0.76
CIRBP-217ENST00000588230 CAPN11Q9UMQ6 739 aa19.81■□□□□ 0.76
CIRBP-217ENST00000588230 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.81■□□□□ 0.766e-7■□□□□ 11
CIRBP-217ENST00000588230 NCOR2Q9Y618 2525 aa19.81■□□□□ 0.76
CIRBP-217ENST00000588230 EPHX1P07099 455 aa19.8■□□□□ 0.76
CIRBP-217ENST00000588230 GZMAP12544 262 aa19.8■□□□□ 0.76
CIRBP-217ENST00000588230 GPD1P21695 349 aa19.8■□□□□ 0.76
CIRBP-217ENST00000588230 RRM1P23921 792 aa19.8■□□□□ 0.76
CIRBP-217ENST00000588230 OXCT1P55809 520 aa19.8■□□□□ 0.76
CIRBP-217ENST00000588230 C15orf59Q2T9L4 293 aaPredicted RBP19.8■□□□□ 0.76
CIRBP-217ENST00000588230 TDRD12Q587J7 1177 aaKnown RBP19.8■□□□□ 0.76
CIRBP-217ENST00000588230 DCUN1D2Q6PH85 259 aa19.8■□□□□ 0.76
CIRBP-217ENST00000588230 WDR59Q6PJI9 974 aa19.8■□□□□ 0.76
CIRBP-217ENST00000588230 C11orf74Q86VG3 221 aa19.8■□□□□ 0.76
CIRBP-217ENST00000588230 RLN3Q8WXF3 142 aa19.8■□□□□ 0.76
CIRBP-217ENST00000588230 SPACA7Q96KW9 195 aa19.8■□□□□ 0.76
CIRBP-217ENST00000588230 C1orf74Q96LT6 269 aa19.8■□□□□ 0.76
CIRBP-217ENST00000588230 BZW2Q9Y6E2 419 aaKnown RBP19.8■□□□□ 0.76
CIRBP-217ENST00000588230 SPTBN2O15020 2390 aa19.8■□□□□ 0.76
CIRBP-217ENST00000588230 ITIH6Q6UXX5 1313 aa19.79■□□□□ 0.76
CIRBP-217ENST00000588230 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.79■□□□□ 0.76
CIRBP-217ENST00000588230 PRR5-ARHGAP8B1AHC4 643 aa19.79■□□□□ 0.76
CIRBP-217ENST00000588230 I6L893 689 aaPredicted RBP19.79■□□□□ 0.76
CIRBP-217ENST00000588230 DDX3XO00571 662 aaKnown RBP eCLIP19.79■□□□□ 0.761e-13■■■□□ 16.1
CIRBP-217ENST00000588230 ASLP04424 464 aa19.79■□□□□ 0.76
CIRBP-217ENST00000588230 PRKCHP24723 683 aa19.79■□□□□ 0.76
CIRBP-217ENST00000588230 P2RY2P41231 377 aa19.79■□□□□ 0.76
CIRBP-217ENST00000588230 CSKP41240 450 aa19.79■□□□□ 0.76
CIRBP-217ENST00000588230 ST8SIA6P61647 398 aa19.79■□□□□ 0.76
CIRBP-217ENST00000588230 ARHGAP8P85298 464 aa19.79■□□□□ 0.76
CIRBP-217ENST00000588230 ZNF177Q13360 481 aaPredicted RBP19.79■□□□□ 0.76
CIRBP-217ENST00000588230 PUM1Q14671 1186 aaKnown RBP eCLIP19.79■□□□□ 0.76
CIRBP-217ENST00000588230 ELF2Q15723 593 aa19.79■□□□□ 0.76
CIRBP-217ENST00000588230 CCDC6Q16204 474 aa19.79■□□□□ 0.76
CIRBP-217ENST00000588230 MAP7D1Q3KQU3 841 aa19.79■□□□□ 0.76
CIRBP-217ENST00000588230 ARL13BQ3SXY8 428 aa19.79■□□□□ 0.76
CIRBP-217ENST00000588230 PITRM1Q5JRX3 1037 aa19.79■□□□□ 0.76
CIRBP-217ENST00000588230 SH3PXD2AQ5TCZ1 1133 aa19.79■□□□□ 0.76
CIRBP-217ENST00000588230 PMS2CLQ68D20 193 aa19.79■□□□□ 0.76
CIRBP-217ENST00000588230 STRADAQ7RTN6 431 aa19.79■□□□□ 0.76
CIRBP-217ENST00000588230 FRMD1Q8N878 549 aa19.79■□□□□ 0.76
CIRBP-217ENST00000588230 TTC17Q96AE7 1141 aa19.79■□□□□ 0.76
CIRBP-217ENST00000588230 HAPLN3Q96S86 360 aa19.79■□□□□ 0.76
CIRBP-217ENST00000588230 TMPRSS4Q9NRS4 437 aa19.79■□□□□ 0.76
CIRBP-217ENST00000588230 INTS6Q9UL03 887 aaKnown RBP19.79■□□□□ 0.76
CIRBP-217ENST00000588230 PCDHGA5Q9Y5G8 931 aa19.79■□□□□ 0.76
CIRBP-217ENST00000588230 SNX10Q9Y5X0 201 aa19.79■□□□□ 0.76
CIRBP-217ENST00000588230 TCRBV5S1A1TA0A578 114 aa19.78■□□□□ 0.76
CIRBP-217ENST00000588230 MAP3K13O43283 966 aa19.78■□□□□ 0.76
CIRBP-217ENST00000588230 CLDN11O75508 207 aa19.78■□□□□ 0.76
CIRBP-217ENST00000588230 RHOBTB1O94844 696 aa19.78■□□□□ 0.76
CIRBP-217ENST00000588230 FTLP02792 175 aaPredicted RBP19.78■□□□□ 0.76
CIRBP-217ENST00000588230 GYPCP04921 128 aa19.78■□□□□ 0.76
CIRBP-217ENST00000588230 HLA-EP13747 358 aa19.78■□□□□ 0.76
CIRBP-217ENST00000588230 NDUFV2P19404 249 aa19.78■□□□□ 0.76
CIRBP-217ENST00000588230 IRAK1P51617 712 aa19.78■□□□□ 0.76
CIRBP-217ENST00000588230 SLC12A1Q13621 1099 aa19.78■□□□□ 0.76
CIRBP-217ENST00000588230 SF3A2Q15428 464 aaKnown RBP19.78■□□□□ 0.76
CIRBP-217ENST00000588230 PTPRNQ16849 979 aa19.78■□□□□ 0.76
CIRBP-217ENST00000588230 PLEKHG6Q3KR16 790 aa19.78■□□□□ 0.76
CIRBP-217ENST00000588230 C5orf22Q49AR2 442 aa19.78■□□□□ 0.76
CIRBP-217ENST00000588230 KIAA1324Q6UXG2 1013 aaKnown RBP19.78■□□□□ 0.76
CIRBP-217ENST00000588230 ERMP1Q7Z2K6 904 aa19.78■□□□□ 0.76
CIRBP-217ENST00000588230 VPS36Q86VN1 386 aa19.78■□□□□ 0.76
CIRBP-217ENST00000588230 FAM172AQ8WUF8 416 aa19.78■□□□□ 0.76
CIRBP-217ENST00000588230 CENPIQ92674 756 aaPredicted RBP19.78■□□□□ 0.76
CIRBP-217ENST00000588230 MRGPRX1Q96LB2 322 aa19.78■□□□□ 0.76
CIRBP-217ENST00000588230 MCEEQ96PE7 176 aa19.78■□□□□ 0.76
CIRBP-217ENST00000588230 PPP1R9BQ96SB3 815 aa19.78■□□□□ 0.76
CIRBP-217ENST00000588230 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.78■□□□□ 0.76
CIRBP-217ENST00000588230 TMEM245Q9H330 911 aa19.78■□□□□ 0.76
CIRBP-217ENST00000588230 PARVAQ9NVD7 372 aa19.78■□□□□ 0.76
CIRBP-217ENST00000588230 MBD1Q9UIS9 605 aaPredicted RBP19.78■□□□□ 0.76
CIRBP-217ENST00000588230 GDF9O60383 454 aa19.77■□□□□ 0.76
CIRBP-217ENST00000588230 SRGAP2O75044 1071 aa19.77■□□□□ 0.76
CIRBP-217ENST00000588230 RTN2O75298 545 aa19.77■□□□□ 0.76
CIRBP-217ENST00000588230 SERPING1P05155 500 aa19.77■□□□□ 0.76
CIRBP-217ENST00000588230 ZNF806P0C7X5 589 aa19.77■□□□□ 0.76
CIRBP-217ENST00000588230 DESP17661 470 aa19.77■□□□□ 0.76
CIRBP-217ENST00000588230 CASP14P31944 242 aa19.77■□□□□ 0.76
CIRBP-217ENST00000588230 ADRA1BP35368 520 aa19.77■□□□□ 0.76
CIRBP-217ENST00000588230 MPLP40238 635 aa19.77■□□□□ 0.76
CIRBP-217ENST00000588230 ZNF143P52747 638 aaPredicted RBP19.77■□□□□ 0.76
CIRBP-217ENST00000588230 CDH4P55283 916 aa19.77■□□□□ 0.76
CIRBP-217ENST00000588230 RPL7AP62424 266 aaKnown RBP19.77■□□□□ 0.76
CIRBP-217ENST00000588230 RAB6CQ53S08 254 aa19.77■□□□□ 0.76
CIRBP-217ENST00000588230 HGSNATQ68CP4 663 aa19.77■□□□□ 0.76
CIRBP-217ENST00000588230 APCDD1Q8J025 514 aa19.77■□□□□ 0.76
CIRBP-217ENST00000588230 RAB6CQ9H0N0 254 aa19.77■□□□□ 0.76
CIRBP-217ENST00000588230 SLC6A17Q9H1V8 727 aa19.77■□□□□ 0.76
CIRBP-217ENST00000588230 SMOC1Q9H4F8 434 aa19.77■□□□□ 0.76
CIRBP-217ENST00000588230 PRDM16Q9HAZ2 1276 aa19.77■□□□□ 0.76
CIRBP-217ENST00000588230 RXFP3Q9NSD7 469 aa19.77■□□□□ 0.76
CIRBP-217ENST00000588230 SUN2Q9UH99 717 aa19.77■□□□□ 0.76
CIRBP-217ENST00000588230 MUC22E2RYF6 1773 aaPredicted RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms