RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 MAVSQ7Z434 540 aa19.02■□□□□ 0.64
DDX39A-206ENST00000587730 TRPM4Q8TD43 1214 aa19.02■□□□□ 0.64
DDX39A-206ENST00000587730 NCSTNQ92542 709 aa19.02■□□□□ 0.64
DDX39A-206ENST00000587730 SNX25Q9H3E2 840 aa19.02■□□□□ 0.64
DDX39A-206ENST00000587730 PNPOQ9NVS9 261 aa19.02■□□□□ 0.64
DDX39A-206ENST00000587730 SYBUQ9NX95 663 aa19.02■□□□□ 0.64
DDX39A-206ENST00000587730 TMEM216Q9P0N5 145 aa19.02■□□□□ 0.64
DDX39A-206ENST00000587730 UBQLN1Q9UMX0 589 aaKnown RBP19.02■□□□□ 0.64
DDX39A-206ENST00000587730 POMPQ9Y244 141 aa19.02■□□□□ 0.64
DDX39A-206ENST00000587730 PLXNA1Q9UIW2 1896 aa19.02■□□□□ 0.64
DDX39A-206ENST00000587730 GOLGA8QA0A0J9YX86 632 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 SMIM31A0A1B0GVY4 71 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 GOLGA8OA6NCC3 632 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 GOLGA8NF8WBI6 632 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 AP1G1O43747 822 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 MFSD11O43934 449 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 TRIM13O60858 407 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 PRKCGP05129 697 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 NCF2P19878 526 aaPredicted RBP19.02■□□□□ 0.63
DDX39A-206ENST00000587730 ITGAXP20702 1163 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 ADORA2AP29274 412 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 NOS2P35228 1153 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 IREB2P48200 963 aaKnown RBP19.02■□□□□ 0.63
DDX39A-206ENST00000587730 SULT1E1P49888 294 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 TBL3Q12788 808 aaKnown RBP19.02■□□□□ 0.63
DDX39A-206ENST00000587730 SOWAHAQ2M3V2 549 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 LIN52Q52LA3 116 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 ZFP1Q6P2D0 407 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 COPS5Q92905 334 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 DTNBP1Q96EV8 351 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 LGMNQ99538 433 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 VTA1Q9NP79 307 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 GDAP2Q9NXN4 497 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 VTI1BQ9UEU0 232 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 VPS28Q9UK41 221 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 TRHDEQ9UKU6 1024 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 COMMD3-BMI1R4GMX3 469 aa19.02■□□□□ 0.63
DDX39A-206ENST00000587730 AP2A1O95782 977 aa19.01■□□□□ 0.63
DDX39A-206ENST00000587730 VTNP04004 478 aa19.01■□□□□ 0.63
DDX39A-206ENST00000587730 FAM163BP0C2L3 166 aa19.01■□□□□ 0.63
DDX39A-206ENST00000587730 LCP1P13796 627 aa19.01■□□□□ 0.63
DDX39A-206ENST00000587730 TFE3P19532 575 aaPredicted RBP19.01■□□□□ 0.63
DDX39A-206ENST00000587730 GNL1P36915 607 aaPredicted RBP19.01■□□□□ 0.63
DDX39A-206ENST00000587730 NPY2RP49146 381 aa19.01■□□□□ 0.63
DDX39A-206ENST00000587730 EPHB1P54762 984 aa19.01■□□□□ 0.63
DDX39A-206ENST00000587730 CUL3Q13618 768 aa19.01■□□□□ 0.63
DDX39A-206ENST00000587730 ITGA9Q13797 1035 aa19.01■□□□□ 0.63
DDX39A-206ENST00000587730 RASIP1Q5U651 963 aa19.01■□□□□ 0.63
DDX39A-206ENST00000587730 RAPH1Q70E73 1250 aa19.01■□□□□ 0.63
DDX39A-206ENST00000587730 CLEC14AQ86T13 490 aa19.01■□□□□ 0.63
DDX39A-206ENST00000587730 TMEM135Q86UB9 458 aa19.01■□□□□ 0.63
DDX39A-206ENST00000587730 ERO1BQ86YB8 467 aa19.01■□□□□ 0.63
DDX39A-206ENST00000587730 DEFB107AQ8IZN7 70 aa19.01■□□□□ 0.63
DDX39A-206ENST00000587730 ICA1LQ8NDH6 482 aa19.01■□□□□ 0.63
DDX39A-206ENST00000587730 GDPD5Q8WTR4 605 aa19.01■□□□□ 0.63
DDX39A-206ENST00000587730 NT5C3BQ969T7 300 aa19.01■□□□□ 0.63
DDX39A-206ENST00000587730 AZIN2Q96A70 460 aa19.01■□□□□ 0.63
DDX39A-206ENST00000587730 TSNARE1Q96NA8 513 aa19.01■□□□□ 0.63
DDX39A-206ENST00000587730 VAT1Q99536 393 aa19.01■□□□□ 0.63
DDX39A-206ENST00000587730 ILKAPQ9H0C8 392 aaPredicted RBP19.01■□□□□ 0.63
DDX39A-206ENST00000587730 EPB41L1Q9H4G0 881 aa19.01■□□□□ 0.63
DDX39A-206ENST00000587730 TBC1D30Q9Y2I9 924 aa19.01■□□□□ 0.63
DDX39A-206ENST00000587730 PTPRFP10586 1907 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 DDNO94850 711 aaPredicted RBP19■□□□□ 0.63
DDX39A-206ENST00000587730 TOP3BO95985 862 aaKnown RBP19■□□□□ 0.63
DDX39A-206ENST00000587730 PSMB4P28070 264 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 SERPINB6P35237 376 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 HCAR3P49019 387 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 POLE2P56282 527 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 KLF10Q13118 480 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 FBXO47Q5MNV8 452 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 C9orf57Q5W0N0 161 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 ITPRIPL1Q6GPH6 555 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 KBTBD6Q86V97 674 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 DCLK2Q8N568 766 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 SLC25A41Q8N5S1 370 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 C7orf31Q8N865 590 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 PYDC1Q8WXC3 89 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 TUBGCP5Q96RT8 1024 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 LBHD1Q9BQE6 289 aaPredicted RBP19■□□□□ 0.63
DDX39A-206ENST00000587730 SPATA16Q9BXB7 569 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 STK39Q9UEW8 545 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 PSAT1Q9Y617 370 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 EME2A4GXA9 379 aaPredicted RBP19■□□□□ 0.63
DDX39A-206ENST00000587730 UPP2O95045 317 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 PABPC4LP0CB38 370 aaKnown RBP19■□□□□ 0.63
DDX39A-206ENST00000587730 POLD2P49005 469 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 HERC3Q15034 1050 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 RALGPS1Q5JS13 557 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 FOXB2Q5VYV0 432 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 BNIPLQ7Z465 357 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 UNC5BQ8IZJ1 945 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 ZNF567Q8N184 647 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 TMEM130Q8N3G9 435 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 POU5F2Q8N7G0 328 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 CCNYQ8ND76 341 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 GTF3C2Q8WUA4 911 aaPredicted RBP19■□□□□ 0.63
DDX39A-206ENST00000587730 EBF3Q9H4W6 596 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 COG4Q9H9E3 785 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 GPBP1L1Q9HC44 474 aaPredicted RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms