RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 ADAM32Q8TC27 787 aa16.92■□□□□ 0.3
NPC1-205ENST00000587163 TARSL2A2RTX5 802 aaKnown RBP16.91■□□□□ 0.3
NPC1-205ENST00000587163 RFPL3O75679 317 aa16.91■□□□□ 0.3
NPC1-205ENST00000587163 PAEPP09466 180 aa16.91■□□□□ 0.3
NPC1-205ENST00000587163 PSMD8P48556 350 aa16.91■□□□□ 0.3
NPC1-205ENST00000587163 ACADVLP49748 655 aa16.91■□□□□ 0.3
NPC1-205ENST00000587163 CCR5P51681 352 aa16.91■□□□□ 0.3
NPC1-205ENST00000587163 KRT85P78386 507 aa16.91■□□□□ 0.3
NPC1-205ENST00000587163 SEMG2Q02383 582 aa16.91■□□□□ 0.3
NPC1-205ENST00000587163 DCAF6Q58WW2 860 aa16.91■□□□□ 0.3
NPC1-205ENST00000587163 MS4A13Q5J8X5 152 aa16.91■□□□□ 0.3
NPC1-205ENST00000587163 APCDD1Q8J025 514 aa16.91■□□□□ 0.3
NPC1-205ENST00000587163 STK40Q8N2I9 435 aa16.91■□□□□ 0.3
NPC1-205ENST00000587163 ZNF557Q8N988 423 aaPredicted RBP16.91■□□□□ 0.3
NPC1-205ENST00000587163 KDM1BQ8NB78 822 aa16.91■□□□□ 0.3
NPC1-205ENST00000587163 TSC1Q92574 1164 aa16.91■□□□□ 0.3
NPC1-205ENST00000587163 KAT5Q92993 513 aa16.91■□□□□ 0.3
NPC1-205ENST00000587163 SLC35C1Q96A29 364 aa16.91■□□□□ 0.3
NPC1-205ENST00000587163 SKA1Q96BD8 255 aa16.91■□□□□ 0.3
NPC1-205ENST00000587163 SLC39A13Q96H72 371 aa16.91■□□□□ 0.3
NPC1-205ENST00000587163 SERAC1Q96JX3 654 aa16.91■□□□□ 0.3
NPC1-205ENST00000587163 RPL10LQ96L21 214 aaKnown RBP16.91■□□□□ 0.3
NPC1-205ENST00000587163 MIS12Q9H081 205 aa16.91■□□□□ 0.3
NPC1-205ENST00000587163 XPO7Q9UIA9 1087 aaKnown RBP16.91■□□□□ 0.3
NPC1-205ENST00000587163 FZD4Q9ULV1 537 aa16.91■□□□□ 0.3
NPC1-205ENST00000587163 RAI2Q9Y5P3 530 aa16.91■□□□□ 0.3
NPC1-205ENST00000587163 SHROOM3Q8TF72 1996 aa16.91■□□□□ 0.3
NPC1-205ENST00000587163 SETXQ7Z333 2677 aaKnown RBP16.91■□□□□ 0.3
NPC1-205ENST00000587163 EDDM13A0A1B0GTR0 161 aa16.9■□□□□ 0.3
NPC1-205ENST00000587163 M0QYV0 167 aa16.9■□□□□ 0.3
NPC1-205ENST00000587163 TLR4O00206 839 aa16.9■□□□□ 0.3
NPC1-205ENST00000587163 SLC16A3O15427 465 aaKnown RBP16.9■□□□□ 0.3
NPC1-205ENST00000587163 SRPRAP08240 638 aaKnown RBP16.9■□□□□ 0.3
NPC1-205ENST00000587163 C1SP09871 688 aa16.9■□□□□ 0.3
NPC1-205ENST00000587163 GOT1P17174 413 aa16.9■□□□□ 0.3
NPC1-205ENST00000587163 TBXAS1P24557 533 aaPredicted RBP16.9■□□□□ 0.3
NPC1-205ENST00000587163 BRD2P25440 801 aaKnown RBP16.9■□□□□ 0.3
NPC1-205ENST00000587163 EIF2S3P41091 472 aaKnown RBP16.9■□□□□ 0.3
NPC1-205ENST00000587163 NUMBP49757 651 aa16.9■□□□□ 0.3
NPC1-205ENST00000587163 ADPRHP54922 357 aa16.9■□□□□ 0.3
NPC1-205ENST00000587163 NXPH1P58417 271 aa16.9■□□□□ 0.3
NPC1-205ENST00000587163 SFSWAPQ12872 951 aaKnown RBP16.9■□□□□ 0.3
NPC1-205ENST00000587163 PNOCQ13519 176 aa16.9■□□□□ 0.3
NPC1-205ENST00000587163 CDH18Q13634 790 aa16.9■□□□□ 0.3
NPC1-205ENST00000587163 C6orf118Q5T5N4 469 aa16.9■□□□□ 0.3
NPC1-205ENST00000587163 HES3Q5TGS1 186 aa16.9■□□□□ 0.3
NPC1-205ENST00000587163 OR14C36Q8NHC7 312 aa16.9■□□□□ 0.3
NPC1-205ENST00000587163 DQX1Q8TE96 717 aaKnown RBP16.9■□□□□ 0.3
NPC1-205ENST00000587163 PTPRN2Q92932 1015 aa16.9■□□□□ 0.3
NPC1-205ENST00000587163 NXPE2Q96DL1 559 aa16.9■□□□□ 0.3
NPC1-205ENST00000587163 UBL7Q96S82 380 aaPredicted RBP16.9■□□□□ 0.3
NPC1-205ENST00000587163 GDF3Q9NR23 364 aa16.9■□□□□ 0.3
NPC1-205ENST00000587163 NAALADL1Q9UQQ1 740 aa16.9■□□□□ 0.3
NPC1-205ENST00000587163 TLR6Q9Y2C9 796 aa16.9■□□□□ 0.3
NPC1-205ENST00000587163 PCDHB4Q9Y5E5 795 aa16.9■□□□□ 0.3
NPC1-205ENST00000587163 HELZ2Q9BYK8 2649 aaKnown RBP16.9■□□□□ 0.3
NPC1-205ENST00000587163 ITIH6Q6UXX5 1313 aa16.9■□□□□ 0.3
NPC1-205ENST00000587163 MYLKQ15746 1914 aa16.9■□□□□ 0.3
NPC1-205ENST00000587163 A0A1W2PQ27 194 aa16.89■□□□□ 0.29
NPC1-205ENST00000587163 A0A1W2PQ64 194 aa16.89■□□□□ 0.29
NPC1-205ENST00000587163 LUC7L3O95232 432 aaKnown RBP16.89■□□□□ 0.29
NPC1-205ENST00000587163 MOCS2O96007 188 aaPredicted RBP16.89■□□□□ 0.29
NPC1-205ENST00000587163 VAV1P15498 845 aa16.89■□□□□ 0.29
NPC1-205ENST00000587163 EPHA8P29322 1005 aaPredicted RBP16.89■□□□□ 0.29
NPC1-205ENST00000587163 HNF1BP35680 557 aa16.89■□□□□ 0.29
NPC1-205ENST00000587163 STK19P49842 368 aaPredicted RBP16.89■□□□□ 0.29
NPC1-205ENST00000587163 METAP1P53582 386 aa16.89■□□□□ 0.29
NPC1-205ENST00000587163 PPP2CBP62714 309 aa16.89■□□□□ 0.29
NPC1-205ENST00000587163 PPP2CAP67775 309 aa16.89■□□□□ 0.29
NPC1-205ENST00000587163 FKBP3Q00688 224 aaKnown RBP16.89■□□□□ 0.29
NPC1-205ENST00000587163 ECT2LQ008S8 904 aa16.89■□□□□ 0.29
NPC1-205ENST00000587163 SYPL2Q5VXT5 272 aa16.89■□□□□ 0.29
NPC1-205ENST00000587163 FBXL19Q6PCT2 694 aa16.89■□□□□ 0.29
NPC1-205ENST00000587163 SND1Q7KZF4 910 aaKnown RBP eCLIP16.89■□□□□ 0.292e-7■■■□□ 17.2
NPC1-205ENST00000587163 KANSL1Q7Z3B3 1105 aa16.89■□□□□ 0.29
NPC1-205ENST00000587163 SPATS2Q86XZ4 545 aaKnown RBP16.89■□□□□ 0.29
NPC1-205ENST00000587163 HSFY1Q96LI6 401 aa16.89■□□□□ 0.29
NPC1-205ENST00000587163 DDX50Q9BQ39 737 aaKnown RBP16.89■□□□□ 0.29
NPC1-205ENST00000587163 PRORYQ9H606 182 aa16.89■□□□□ 0.29
NPC1-205ENST00000587163 AK5Q9Y6K8 562 aa16.89■□□□□ 0.29
NPC1-205ENST00000587163 TBC1D3DA0A087WVF3 549 aa16.88■□□□□ 0.29
NPC1-205ENST00000587163 TBC1D3IA0A087WXS9 549 aa16.88■□□□□ 0.29
NPC1-205ENST00000587163 TBC1D3EA0A087X179 549 aa16.88■□□□□ 0.29
NPC1-205ENST00000587163 TBC1D3KA0A087X1G2 549 aa16.88■□□□□ 0.29
NPC1-205ENST00000587163 TYW5A2RUC4 315 aaKnown RBP16.88■□□□□ 0.29
NPC1-205ENST00000587163 TRIM49BA6NDI0 452 aa16.88■□□□□ 0.29
NPC1-205ENST00000587163 TBC1D3FA6NER0 549 aaPredicted RBP16.88■□□□□ 0.29
NPC1-205ENST00000587163 TBC1D3LB9A6J9 549 aa16.88■□□□□ 0.29
NPC1-205ENST00000587163 LATO43561 262 aa16.88■□□□□ 0.29
NPC1-205ENST00000587163 C1QL1O75973 258 aa16.88■□□□□ 0.29
NPC1-205ENST00000587163 FBXO21O94952 628 aa16.88■□□□□ 0.29
NPC1-205ENST00000587163 TBC1D3HP0C7X1 549 aa16.88■□□□□ 0.29
NPC1-205ENST00000587163 CDK4P11802 303 aa16.88■□□□□ 0.29
NPC1-205ENST00000587163 C5AR1P21730 350 aa16.88■□□□□ 0.29
NPC1-205ENST00000587163 DRD3P35462 400 aa16.88■□□□□ 0.29
NPC1-205ENST00000587163 RXRGP48443 463 aa16.88■□□□□ 0.29
NPC1-205ENST00000587163 ARRB1P49407 418 aaPredicted RBP16.88■□□□□ 0.29
NPC1-205ENST00000587163 SFMBT2Q5VUG0 894 aa16.88■□□□□ 0.29
NPC1-205ENST00000587163 TBC1D3GQ6DHY5 549 aa16.88■□□□□ 0.29
NPC1-205ENST00000587163 TBC1D3CQ6IPX1 549 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms