RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 BBC3Q96PG8 261 aaPredicted RBP14.99□□□□□ -0.01
SDF2-202ENST00000585428 NUCKS1Q9H1E3 243 aaKnown RBP14.99□□□□□ -0.01
SDF2-202ENST00000585428 METTL14Q9HCE5 456 aaKnown RBP14.99□□□□□ -0.01
SDF2-202ENST00000585428 FZD4Q9ULV1 537 aa14.99□□□□□ -0.01
SDF2-202ENST00000585428 NAALADL1Q9UQQ1 740 aa14.99□□□□□ -0.01
SDF2-202ENST00000585428 PCDHGA1Q9Y5H4 931 aa14.99□□□□□ -0.01
SDF2-202ENST00000585428 ATP6V1DQ9Y5K8 247 aa14.99□□□□□ -0.01
SDF2-202ENST00000585428 ITIH6Q6UXX5 1313 aa14.98□□□□□ -0.01
SDF2-202ENST00000585428 NUMA1Q14980 2115 aa14.98□□□□□ -0.01
SDF2-202ENST00000585428 TRIM49BA6NDI0 452 aa14.98□□□□□ -0.01
SDF2-202ENST00000585428 LRRC72A6NJI9 287 aa14.98□□□□□ -0.01
SDF2-202ENST00000585428 M0QYV0 167 aa14.98□□□□□ -0.01
SDF2-202ENST00000585428 C1SP09871 688 aa14.98□□□□□ -0.01
SDF2-202ENST00000585428 GOT1P17174 413 aa14.98□□□□□ -0.01
SDF2-202ENST00000585428 BRD2P25440 801 aaKnown RBP14.98□□□□□ -0.01
SDF2-202ENST00000585428 CD38P28907 300 aa14.98□□□□□ -0.01
SDF2-202ENST00000585428 ECT2LQ008S8 904 aa14.98□□□□□ -0.01
SDF2-202ENST00000585428 EIF4EBP2Q13542 120 aaPredicted RBP14.98□□□□□ -0.01
SDF2-202ENST00000585428 SYPL2Q5VXT5 272 aa14.98□□□□□ -0.01
SDF2-202ENST00000585428 GATAD2AQ86YP4 633 aa14.98□□□□□ -0.01
SDF2-202ENST00000585428 APCDD1Q8J025 514 aa14.98□□□□□ -0.01
SDF2-202ENST00000585428 AADATQ8N5Z0 425 aa14.98□□□□□ -0.01
SDF2-202ENST00000585428 DQX1Q8TE96 717 aaKnown RBP14.98□□□□□ -0.01
SDF2-202ENST00000585428 TSC1Q92574 1164 aa14.98□□□□□ -0.01
SDF2-202ENST00000585428 SKA1Q96BD8 255 aa14.98□□□□□ -0.01
SDF2-202ENST00000585428 OMDQ99983 421 aa14.98□□□□□ -0.01
SDF2-202ENST00000585428 MIS12Q9H081 205 aa14.98□□□□□ -0.01
SDF2-202ENST00000585428 GDPD2Q9HCC8 539 aa14.98□□□□□ -0.01
SDF2-202ENST00000585428 FTSJ1Q9UET6 329 aa14.98□□□□□ -0.01
SDF2-202ENST00000585428 XPO7Q9UIA9 1087 aaKnown RBP14.98□□□□□ -0.01
SDF2-202ENST00000585428 CNTN6Q9UQ52 1028 aa14.98□□□□□ -0.01
SDF2-202ENST00000585428 MUC22E2RYF6 1773 aaPredicted RBP14.98□□□□□ -0.01
SDF2-202ENST00000585428 EDDM13A0A1B0GTR0 161 aa14.97□□□□□ -0.01
SDF2-202ENST00000585428 RNASEH2AO75792 299 aaKnown RBP14.97□□□□□ -0.01
SDF2-202ENST00000585428 LUC7L3O95232 432 aaKnown RBP14.97□□□□□ -0.01
SDF2-202ENST00000585428 LDOC1O95751 146 aaPredicted RBP14.97□□□□□ -0.01
SDF2-202ENST00000585428 CDK4P11802 303 aa14.97□□□□□ -0.01
SDF2-202ENST00000585428 INAVAQ3KP66 663 aa14.97□□□□□ -0.01
SDF2-202ENST00000585428 PPM1KQ8N3J5 372 aa14.97□□□□□ -0.01
SDF2-202ENST00000585428 EHBP1Q8NDI1 1231 aa14.97□□□□□ -0.01
SDF2-202ENST00000585428 STK32AQ8WU08 396 aa14.97□□□□□ -0.01
SDF2-202ENST00000585428 ERCC4Q92889 916 aaPredicted RBP14.97□□□□□ -0.01
SDF2-202ENST00000585428 FAM131CQ96AQ9 280 aa14.97□□□□□ -0.01
SDF2-202ENST00000585428 RPL10LQ96L21 214 aaKnown RBP14.97□□□□□ -0.01
SDF2-202ENST00000585428 SERPINB11Q96P15 392 aa14.97□□□□□ -0.01
SDF2-202ENST00000585428 NT5C1BQ96P26 610 aa14.97□□□□□ -0.01
SDF2-202ENST00000585428 GTPBP4Q9BZE4 634 aaKnown RBP14.97□□□□□ -0.01
SDF2-202ENST00000585428 ARHGAP20Q9P2F6 1191 aa14.97□□□□□ -0.01
SDF2-202ENST00000585428 TPX2Q9ULW0 747 aaKnown RBP14.97□□□□□ -0.01
SDF2-202ENST00000585428 KNL1Q8NG31 2342 aa14.97□□□□□ -0.01
SDF2-202ENST00000585428 TYW5A2RUC4 315 aaKnown RBP14.96□□□□□ -0.01
SDF2-202ENST00000585428 TLR4O00206 839 aa14.96□□□□□ -0.01
SDF2-202ENST00000585428 ENC1O14682 589 aa14.96□□□□□ -0.01
SDF2-202ENST00000585428 P4HA2O15460 535 aa14.96□□□□□ -0.01
SDF2-202ENST00000585428 LATO43561 262 aa14.96□□□□□ -0.01
SDF2-202ENST00000585428 ITGAVP06756 1048 aa14.96□□□□□ -0.01
SDF2-202ENST00000585428 C5AR1P21730 350 aa14.96□□□□□ -0.01
SDF2-202ENST00000585428 RXRGP48443 463 aa14.96□□□□□ -0.01
SDF2-202ENST00000585428 PLK1P53350 603 aa14.96□□□□□ -0.01
SDF2-202ENST00000585428 GCNT1Q02742 428 aa14.96□□□□□ -0.01
SDF2-202ENST00000585428 CDH18Q13634 790 aa14.96□□□□□ -0.01
SDF2-202ENST00000585428 CCDC157Q569K6 752 aa14.96□□□□□ -0.01
SDF2-202ENST00000585428 SND1Q7KZF4 910 aaKnown RBP eCLIP14.96□□□□□ -0.01
SDF2-202ENST00000585428 RRAGAQ7L523 313 aa14.96□□□□□ -0.01
SDF2-202ENST00000585428 TMEM110Q86TL2 294 aa14.96□□□□□ -0.01
SDF2-202ENST00000585428 CCDC117Q8IWD4 279 aaPredicted RBP14.96□□□□□ -0.01
SDF2-202ENST00000585428 STK40Q8N2I9 435 aa14.96□□□□□ -0.01
SDF2-202ENST00000585428 ADAM32Q8TC27 787 aa14.96□□□□□ -0.01
SDF2-202ENST00000585428 DHTKD1Q96HY7 919 aaPredicted RBP14.96□□□□□ -0.01
SDF2-202ENST00000585428 CEP63Q96MT8 703 aa14.96□□□□□ -0.01
SDF2-202ENST00000585428 SLC4A5Q9BY07 1137 aa14.96□□□□□ -0.01
SDF2-202ENST00000585428 ERVMER34-1Q9H9K5 563 aa14.96□□□□□ -0.01
SDF2-202ENST00000585428 CABIN1Q9Y6J0 2220 aa14.95□□□□□ -0.02
SDF2-202ENST00000585428 CBX4O00257 560 aa14.95□□□□□ -0.02
SDF2-202ENST00000585428 PLK4O00444 970 aa14.95□□□□□ -0.02
SDF2-202ENST00000585428 SART1O43290 800 aaKnown RBP14.95□□□□□ -0.02
SDF2-202ENST00000585428 SMC2O95347 1197 aa14.95□□□□□ -0.02
SDF2-202ENST00000585428 MOCS3O95396 460 aa14.95□□□□□ -0.02
SDF2-202ENST00000585428 ADH1BP00325 375 aa14.95□□□□□ -0.02
SDF2-202ENST00000585428 IGLV3-25P01717 112 aa14.95□□□□□ -0.02
SDF2-202ENST00000585428 JUPP14923 745 aa14.95□□□□□ -0.02
SDF2-202ENST00000585428 CD44P16070 742 aaKnown RBP14.95□□□□□ -0.02
SDF2-202ENST00000585428 DRD3P35462 400 aa14.95□□□□□ -0.02
SDF2-202ENST00000585428 ACADSBP45954 432 aa14.95□□□□□ -0.02
SDF2-202ENST00000585428 ADPRHP54922 357 aa14.95□□□□□ -0.02
SDF2-202ENST00000585428 NXPH1P58417 271 aa14.95□□□□□ -0.02
SDF2-202ENST00000585428 BNIP3Q12983 259 aa14.95□□□□□ -0.02
SDF2-202ENST00000585428 SLC12A1Q13621 1099 aa14.95□□□□□ -0.02
SDF2-202ENST00000585428 ZC3H12AQ5D1E8 599 aaKnown RBP14.95□□□□□ -0.02
SDF2-202ENST00000585428 TAC4Q86UU9 113 aa14.95□□□□□ -0.02
SDF2-202ENST00000585428 ARHGEF19Q8IW93 802 aa14.95□□□□□ -0.02
SDF2-202ENST00000585428 LGI2Q8N0V4 545 aa14.95□□□□□ -0.02
SDF2-202ENST00000585428 OR14C36Q8NHC7 312 aa14.95□□□□□ -0.02
SDF2-202ENST00000585428 FRS2Q8WU20 508 aa14.95□□□□□ -0.02
SDF2-202ENST00000585428 SERAC1Q96JX3 654 aa14.95□□□□□ -0.02
SDF2-202ENST00000585428 CNDP2Q96KP4 475 aaKnown RBP14.95□□□□□ -0.02
SDF2-202ENST00000585428 BTN2A3PQ96KV6 586 aa14.95□□□□□ -0.02
SDF2-202ENST00000585428 PRMT1Q99873 361 aaKnown RBP14.95□□□□□ -0.02
SDF2-202ENST00000585428 GDF3Q9NR23 364 aa14.95□□□□□ -0.02
SDF2-202ENST00000585428 AASDHPPTQ9NRN7 309 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms