RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 UBXN1Q04323 297 aa13.58□□□□□ -0.24
ERBB2-220ENST00000584684 ZNF33AQ06730 810 aa13.58□□□□□ -0.24
ERBB2-220ENST00000584684 NME3Q13232 169 aa13.58□□□□□ -0.24
ERBB2-220ENST00000584684 HNRNPA1L2Q32P51 320 aaKnown RBP13.58□□□□□ -0.24
ERBB2-220ENST00000584684 ANO6Q4KMQ2 910 aa13.58□□□□□ -0.24
ERBB2-220ENST00000584684 IL31Q6EBC2 164 aa13.58□□□□□ -0.24
ERBB2-220ENST00000584684 CXorf57Q6NSI4 855 aaKnown RBP13.58□□□□□ -0.24
ERBB2-220ENST00000584684 FBXL22Q6P050 247 aa13.58□□□□□ -0.24
ERBB2-220ENST00000584684 ARMCX6Q7L4S7 300 aa13.58□□□□□ -0.24
ERBB2-220ENST00000584684 CCAR2Q8N163 923 aaKnown RBP13.58□□□□□ -0.24
ERBB2-220ENST00000584684 ERLEC1Q96DZ1 483 aa13.58□□□□□ -0.24
ERBB2-220ENST00000584684 HSPA12BQ96MM6 686 aa13.58□□□□□ -0.24
ERBB2-220ENST00000584684 NLRC4Q9NPP4 1024 aa13.58□□□□□ -0.24
ERBB2-220ENST00000584684 PRSS16Q9NQE7 514 aa13.58□□□□□ -0.24
ERBB2-220ENST00000584684 TMEM74BQ9NUR3 256 aa13.58□□□□□ -0.24
ERBB2-220ENST00000584684 SUN2Q9UH99 717 aa13.58□□□□□ -0.24
ERBB2-220ENST00000584684 SYNJ2BP-COX16A0A087WUM0 186 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 DCDC2BA2VCK2 349 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 PATE3B3GLJ2 98 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 NDUFS2O75306 463 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 CLDN11O75508 207 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 SERPINF2P08697 491 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 ACADMP11310 421 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 TFE3P19532 575 aaPredicted RBP13.57□□□□□ -0.24
ERBB2-220ENST00000584684 CDK11BP21127 795 aaKnown RBP13.57□□□□□ -0.24
ERBB2-220ENST00000584684 SULT1E1P49888 294 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 CENPCQ03188 943 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 SULT2A1Q06520 285 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 AUHQ13825 339 aaKnown RBP13.57□□□□□ -0.24
ERBB2-220ENST00000584684 DUOXA1Q1HG43 343 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 TRIM61Q5EBN2 209 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 SND1Q7KZF4 910 aaKnown RBP eCLIP13.57□□□□□ -0.24
ERBB2-220ENST00000584684 DHX40Q8IX18 779 aaKnown RBP13.57□□□□□ -0.24
ERBB2-220ENST00000584684 CPA5Q8WXQ8 436 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 DNASE2BQ8WZ79 361 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 TOE1Q96GM8 510 aaKnown RBP13.57□□□□□ -0.24
ERBB2-220ENST00000584684 RPRD1AQ96P16 312 aaPredicted RBP13.57□□□□□ -0.24
ERBB2-220ENST00000584684 TBCBQ99426 244 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 NUP58Q9BVL2 599 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 NUSAP1Q9BXS6 441 aaKnown RBP13.57□□□□□ -0.24
ERBB2-220ENST00000584684 RSPH9Q9H1X1 276 aaPredicted RBP13.57□□□□□ -0.24
ERBB2-220ENST00000584684 CAPN10Q9HC96 672 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 TMEM9BQ9NQ34 198 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 COX16Q9P0S2 106 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 SUSD2Q9UGT4 822 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 MYO6Q9UM54 1294 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 ERVW-1Q9UQF0 538 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 HS3ST4Q9Y661 456 aa13.57□□□□□ -0.24
ERBB2-220ENST00000584684 MED19A0JLT2 244 aaPredicted RBP13.56□□□□□ -0.24
ERBB2-220ENST00000584684 I6L893 689 aaPredicted RBP13.56□□□□□ -0.24
ERBB2-220ENST00000584684 ENDOD1O94919 500 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 UNGP13051 313 aaPredicted RBP13.56□□□□□ -0.24
ERBB2-220ENST00000584684 RPS14P62263 151 aaKnown RBP13.56□□□□□ -0.24
ERBB2-220ENST00000584684 IRX4P78413 519 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 ECT2LQ008S8 904 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 DEUP1Q05D60 604 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 KLHL40Q2TBA0 621 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 TTC31Q49AM3 519 aaPredicted RBP13.56□□□□□ -0.24
ERBB2-220ENST00000584684 WDR45BQ5MNZ6 344 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 SYCP2LQ5T4T6 812 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 ZNF776Q68DI1 518 aaPredicted RBP13.56□□□□□ -0.24
ERBB2-220ENST00000584684 TRNP1Q6NT89 227 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 CAVIN1Q6NZI2 390 aaKnown RBP13.56□□□□□ -0.24
ERBB2-220ENST00000584684 MMS22LQ6ZRQ5 1243 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 CIR1Q86X95 450 aaPredicted RBP13.56□□□□□ -0.24
ERBB2-220ENST00000584684 ZNF683Q8IZ20 524 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 ZNF366Q8N895 744 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 IGSF8Q969P0 613 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 C1orf74Q96LT6 269 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 PPP1R9BQ96SB3 815 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 FUCA2Q9BTY2 467 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 TKTL2Q9H0I9 626 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 WDCPQ9H6R7 721 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 ANLNQ9NQW6 1124 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 VANGL2Q9ULK5 521 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 SCML1Q9UN30 329 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 SLC6A14Q9UN76 642 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 TBC1D30Q9Y2I9 924 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 ATXN2Q99700 1313 aaKnown RBP13.56□□□□□ -0.24
ERBB2-220ENST00000584684 CHD8Q9HCK8 2581 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 DOCK4Q8N1I0 1966 aa13.56□□□□□ -0.24
ERBB2-220ENST00000584684 ACACBO00763 2458 aa13.55□□□□□ -0.24
ERBB2-220ENST00000584684 IGLV3-10A0A075B6K4 115 aa13.55□□□□□ -0.24
ERBB2-220ENST00000584684 EDDM13A0A1B0GTR0 161 aa13.55□□□□□ -0.24
ERBB2-220ENST00000584684 TARSL2A2RTX5 802 aaKnown RBP13.55□□□□□ -0.24
ERBB2-220ENST00000584684 SMTNL1A8MU46 457 aa13.55□□□□□ -0.24
ERBB2-220ENST00000584684 GOLGA8SH3BPF8 625 aa13.55□□□□□ -0.24
ERBB2-220ENST00000584684 CDX4O14627 284 aaPredicted RBP13.55□□□□□ -0.24
ERBB2-220ENST00000584684 ADCY5O95622 1261 aa13.55□□□□□ -0.24
ERBB2-220ENST00000584684 RDXP35241 583 aaKnown RBP13.55□□□□□ -0.24
ERBB2-220ENST00000584684 CTSOP43234 321 aaPredicted RBP13.55□□□□□ -0.24
ERBB2-220ENST00000584684 NSFP46459 744 aaKnown RBP13.55□□□□□ -0.24
ERBB2-220ENST00000584684 ZNF165P49910 485 aa13.55□□□□□ -0.24
ERBB2-220ENST00000584684 IRAK1P51617 712 aa13.55□□□□□ -0.24
ERBB2-220ENST00000584684 CDH4P55283 916 aa13.55□□□□□ -0.24
ERBB2-220ENST00000584684 RNASE9P60153 205 aaKnown RBP13.55□□□□□ -0.24
ERBB2-220ENST00000584684 PTP4A2Q12974 167 aa13.55□□□□□ -0.24
ERBB2-220ENST00000584684 CLEC16AQ2KHT3 1053 aa13.55□□□□□ -0.24
ERBB2-220ENST00000584684 C2CD6Q53TS8 623 aa13.55□□□□□ -0.24
ERBB2-220ENST00000584684 PPM1JQ5JR12 505 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms