RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 PLEKP08567 350 aaPredicted RBP25.71■■□□□ 1.71
TSEN54-209ENST00000583454 HOXB2P14652 356 aa25.71■■□□□ 1.71
TSEN54-209ENST00000583454 NTSR1P30989 418 aa25.71■■□□□ 1.71
TSEN54-209ENST00000583454 RFC1P35251 1148 aaPredicted RBP25.71■■□□□ 1.71
TSEN54-209ENST00000583454 WASP42768 502 aa25.71■■□□□ 1.71
TSEN54-209ENST00000583454 MTA1Q13330 715 aa25.71■■□□□ 1.71
TSEN54-209ENST00000583454 TDRD12Q587J7 1177 aaKnown RBP25.71■■□□□ 1.71
TSEN54-209ENST00000583454 PPP1R15BQ5SWA1 713 aa25.71■■□□□ 1.71
TSEN54-209ENST00000583454 PEAR1Q5VY43 1037 aaPredicted RBP25.71■■□□□ 1.71
TSEN54-209ENST00000583454 PSAPL1Q6NUJ1 521 aa25.71■■□□□ 1.71
TSEN54-209ENST00000583454 RFWD3Q6PCD5 774 aa25.71■■□□□ 1.71
TSEN54-209ENST00000583454 WDR59Q6PJI9 974 aa25.71■■□□□ 1.71
TSEN54-209ENST00000583454 RXFP2Q8WXD0 754 aa25.71■■□□□ 1.71
TSEN54-209ENST00000583454 RNF34Q969K3 372 aa25.71■■□□□ 1.71
TSEN54-209ENST00000583454 CFAP57Q96MR6 1250 aa25.71■■□□□ 1.71
TSEN54-209ENST00000583454 SLC2A11Q9BYW1 496 aa25.71■■□□□ 1.71
TSEN54-209ENST00000583454 ISCUQ9H1K1 167 aa25.71■■□□□ 1.71
TSEN54-209ENST00000583454 ARHGAP20Q9P2F6 1191 aa25.71■■□□□ 1.71
TSEN54-209ENST00000583454 ADAMTS1Q9UHI8 967 aa25.71■■□□□ 1.71
TSEN54-209ENST00000583454 SLC27A6Q9Y2P4 619 aa25.71■■□□□ 1.71
TSEN54-209ENST00000583454 CACNA1EQ15878 2313 aa25.7■■□□□ 1.71
TSEN54-209ENST00000583454 GIPC1O14908 333 aa25.7■■□□□ 1.7
TSEN54-209ENST00000583454 PDGFRAP16234 1089 aa25.7■■□□□ 1.7
TSEN54-209ENST00000583454 ABCB4P21439 1286 aa25.7■■□□□ 1.7
TSEN54-209ENST00000583454 RRM1P23921 792 aa25.7■■□□□ 1.7
TSEN54-209ENST00000583454 HOXD9P28356 352 aaPredicted RBP25.7■■□□□ 1.7
TSEN54-209ENST00000583454 PTPN9P43378 593 aa25.7■■□□□ 1.7
TSEN54-209ENST00000583454 DGKGP49619 791 aa25.7■■□□□ 1.7
TSEN54-209ENST00000583454 CCDC14Q49A88 953 aa25.7■■□□□ 1.7
TSEN54-209ENST00000583454 MS4A13Q5J8X5 152 aa25.7■■□□□ 1.7
TSEN54-209ENST00000583454 SPDYCQ5MJ68 293 aa25.7■■□□□ 1.7
TSEN54-209ENST00000583454 BRMS1LQ5PSV4 323 aa25.7■■□□□ 1.7
TSEN54-209ENST00000583454 KIAA1211LQ6NV74 962 aa25.7■■□□□ 1.7
TSEN54-209ENST00000583454 ARMCX6Q7L4S7 300 aa25.7■■□□□ 1.7
TSEN54-209ENST00000583454 VPS36Q86VN1 386 aa25.7■■□□□ 1.7
TSEN54-209ENST00000583454 PRMT1Q99873 361 aaKnown RBP25.7■■□□□ 1.7
TSEN54-209ENST00000583454 GABRG3Q99928 467 aa25.7■■□□□ 1.7
TSEN54-209ENST00000583454 SELENOOQ9BVL4 669 aa25.7■■□□□ 1.7
TSEN54-209ENST00000583454 TMEM9BQ9NQ34 198 aa25.7■■□□□ 1.7
TSEN54-209ENST00000583454 ANGPTL2Q9UKU9 493 aa25.7■■□□□ 1.7
TSEN54-209ENST00000583454 CLEC4EQ9ULY5 219 aa25.7■■□□□ 1.7
TSEN54-209ENST00000583454 IGF2RP11717 2491 aa25.7■■□□□ 1.7
TSEN54-209ENST00000583454 PCNX2A6NKB5 2137 aa25.69■■□□□ 1.7
TSEN54-209ENST00000583454 TPM1P09493 284 aa25.69■■□□□ 1.7
TSEN54-209ENST00000583454 SGSHP51688 502 aa25.69■■□□□ 1.7
TSEN54-209ENST00000583454 DEUP1Q05D60 604 aa25.69■■□□□ 1.7
TSEN54-209ENST00000583454 DNAJC24Q6P3W2 148 aa25.69■■□□□ 1.7
TSEN54-209ENST00000583454 NUDT18Q6ZVK8 323 aa25.69■■□□□ 1.7
TSEN54-209ENST00000583454 SND1Q7KZF4 910 aaKnown RBP eCLIP25.69■■□□□ 1.7
TSEN54-209ENST00000583454 SYT12Q8IV01 421 aa25.69■■□□□ 1.7
TSEN54-209ENST00000583454 PGBD3Q8N328 593 aa25.69■■□□□ 1.7
TSEN54-209ENST00000583454 CENPIQ92674 756 aaPredicted RBP25.69■■□□□ 1.7
TSEN54-209ENST00000583454 MYEOVQ96EZ4 313 aa25.69■■□□□ 1.7
TSEN54-209ENST00000583454 WDCPQ9H6R7 721 aa25.69■■□□□ 1.7
TSEN54-209ENST00000583454 ARHGEF38Q9NXL2 777 aa25.69■■□□□ 1.7
TSEN54-209ENST00000583454 PAXBP1Q9Y5B6 917 aa25.69■■□□□ 1.7
TSEN54-209ENST00000583454 CKAP5Q14008 2032 aa25.69■■□□□ 1.7
TSEN54-209ENST00000583454 MAP3K13O43283 966 aa25.68■■□□□ 1.7
TSEN54-209ENST00000583454 MFAP3LO75121 409 aa25.68■■□□□ 1.7
TSEN54-209ENST00000583454 ADCY5O95622 1261 aa25.68■■□□□ 1.7
TSEN54-209ENST00000583454 TACR2P21452 398 aa25.68■■□□□ 1.7
TSEN54-209ENST00000583454 SDC4P31431 198 aa25.68■■□□□ 1.7
TSEN54-209ENST00000583454 ZNF75DP51815 510 aa25.68■■□□□ 1.7
TSEN54-209ENST00000583454 PLEKHA7Q6IQ23 1121 aa25.68■■□□□ 1.7
TSEN54-209ENST00000583454 DNAAF5Q86Y56 855 aa25.68■■□□□ 1.7
TSEN54-209ENST00000583454 HJURPQ8NCD3 748 aaPredicted RBP25.68■■□□□ 1.7
TSEN54-209ENST00000583454 MRFAP1L1Q96HT8 127 aa25.68■■□□□ 1.7
TSEN54-209ENST00000583454 PRICKLE1Q96MT3 831 aaPredicted RBP25.68■■□□□ 1.7
TSEN54-209ENST00000583454 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.68■■□□□ 1.7
TSEN54-209ENST00000583454 PILRBQ9UKJ0 227 aa25.68■■□□□ 1.7
TSEN54-209ENST00000583454 ATXN2Q99700 1313 aaKnown RBP25.67■■□□□ 1.7
TSEN54-209ENST00000583454 A0A087X0T9 212 aa25.67■■□□□ 1.7
TSEN54-209ENST00000583454 I6L893 689 aaPredicted RBP25.67■■□□□ 1.7
TSEN54-209ENST00000583454 PAGE1O75459 146 aa25.67■■□□□ 1.7
TSEN54-209ENST00000583454 FAM228BP0C875 321 aa25.67■■□□□ 1.7
TSEN54-209ENST00000583454 NDUFV2P19404 249 aa25.67■■□□□ 1.7
TSEN54-209ENST00000583454 ITPKAP23677 461 aa25.67■■□□□ 1.7
TSEN54-209ENST00000583454 RDXP35241 583 aaKnown RBP25.67■■□□□ 1.7
TSEN54-209ENST00000583454 NOVA1P51513 510 aaKnown RBP25.67■■□□□ 1.7
TSEN54-209ENST00000583454 MAMLD1Q13495 774 aa25.67■■□□□ 1.7
TSEN54-209ENST00000583454 BYSLQ13895 437 aaKnown RBP25.67■■□□□ 1.7
TSEN54-209ENST00000583454 TRIM61Q5EBN2 209 aa25.67■■□□□ 1.7
TSEN54-209ENST00000583454 DAB2IPQ5VWQ8 1189 aa25.67■■□□□ 1.7
TSEN54-209ENST00000583454 LYSMD4Q5XG99 296 aa25.67■■□□□ 1.7
TSEN54-209ENST00000583454 RAP1GAP2Q684P5 730 aa25.67■■□□□ 1.7
TSEN54-209ENST00000583454 TMC6Q7Z403 805 aa25.67■■□□□ 1.7
TSEN54-209ENST00000583454 TKTL2Q9H0I9 626 aa25.67■■□□□ 1.7
TSEN54-209ENST00000583454 ANLNQ9NQW6 1124 aa25.67■■□□□ 1.7
TSEN54-209ENST00000583454 ABHD10Q9NUJ1 306 aa25.67■■□□□ 1.7
TSEN54-209ENST00000583454 PARVAQ9NVD7 372 aa25.67■■□□□ 1.7
TSEN54-209ENST00000583454 IGHV1OR15-9A0A0B4J2B8 117 aa25.66■■□□□ 1.7
TSEN54-209ENST00000583454 TBL1XO60907 577 aa25.66■■□□□ 1.7
TSEN54-209ENST00000583454 ADKP55263 362 aaKnown RBP25.66■■□□□ 1.7
TSEN54-209ENST00000583454 RPL7AP62424 266 aaKnown RBP25.66■■□□□ 1.7
TSEN54-209ENST00000583454 RPS24P62847 133 aaKnown RBP25.66■■□□□ 1.7
TSEN54-209ENST00000583454 ATP11AP98196 1134 aa25.66■■□□□ 1.7
TSEN54-209ENST00000583454 ST3GAL2Q16842 350 aa25.66■■□□□ 1.7
TSEN54-209ENST00000583454 C15orf59Q2T9L4 293 aaPredicted RBP25.66■■□□□ 1.7
TSEN54-209ENST00000583454 SLC23A3Q6PIS1 610 aa25.66■■□□□ 1.7
TSEN54-209ENST00000583454 STRADAQ7RTN6 431 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms