RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 C4orf47A7E2U8 309 aa20.77■□□□□ 0.92
SMG8-204ENST00000580498 CLDN11O75508 207 aa20.77■□□□□ 0.92
SMG8-204ENST00000580498 SERPINF2P08697 491 aa20.77■□□□□ 0.92
SMG8-204ENST00000580498 NSFP46459 744 aaKnown RBP20.77■□□□□ 0.92
SMG8-204ENST00000580498 COPAP53621 1224 aa20.77■□□□□ 0.92
SMG8-204ENST00000580498 NOMO3P69849 1222 aa20.77■□□□□ 0.92
SMG8-204ENST00000580498 PITX1P78337 314 aaPredicted RBP20.77■□□□□ 0.92
SMG8-204ENST00000580498 IRX4P78413 519 aa20.77■□□□□ 0.92
SMG8-204ENST00000580498 AUHQ13825 339 aaKnown RBP20.77■□□□□ 0.92
SMG8-204ENST00000580498 PTPRNQ16849 979 aa20.77■□□□□ 0.92
SMG8-204ENST00000580498 PLEKHG6Q3KR16 790 aa20.77■□□□□ 0.92
SMG8-204ENST00000580498 SLC25A52Q3SY17 297 aa20.77■□□□□ 0.92
SMG8-204ENST00000580498 PEAR1Q5VY43 1037 aaPredicted RBP20.77■□□□□ 0.92
SMG8-204ENST00000580498 XYLT1Q86Y38 959 aa20.77■□□□□ 0.92
SMG8-204ENST00000580498 CPA5Q8WXQ8 436 aa20.77■□□□□ 0.92
SMG8-204ENST00000580498 PGAP3Q96FM1 320 aaPredicted RBP20.77■□□□□ 0.92
SMG8-204ENST00000580498 NPY6RQ99463 290 aa20.77■□□□□ 0.92
SMG8-204ENST00000580498 BTBD1Q9H0C5 482 aa20.77■□□□□ 0.92
SMG8-204ENST00000580498 TKTL2Q9H0I9 626 aa20.77■□□□□ 0.92
SMG8-204ENST00000580498 SIK2Q9H0K1 926 aa20.77■□□□□ 0.92
SMG8-204ENST00000580498 SEPT11Q9NVA2 429 aaKnown RBP20.77■□□□□ 0.92
SMG8-204ENST00000580498 VANGL2Q9ULK5 521 aa20.77■□□□□ 0.92
SMG8-204ENST00000580498 ERVW-1Q9UQF0 538 aa20.77■□□□□ 0.92
SMG8-204ENST00000580498 ANKRD62A6NC57 917 aa20.76■□□□□ 0.91
SMG8-204ENST00000580498 PATE3B3GLJ2 98 aa20.76■□□□□ 0.91
SMG8-204ENST00000580498 PAGE1O75459 146 aa20.76■□□□□ 0.91
SMG8-204ENST00000580498 IGLV3-19P01714 112 aa20.76■□□□□ 0.91
SMG8-204ENST00000580498 PDGFRAP16234 1089 aa20.76■□□□□ 0.91
SMG8-204ENST00000580498 ZNF18P17022 549 aa20.76■□□□□ 0.91
SMG8-204ENST00000580498 PI4KAP42356 2102 aa20.76■□□□□ 0.91
SMG8-204ENST00000580498 EIF4EBP2Q13542 120 aaPredicted RBP20.76■□□□□ 0.91
SMG8-204ENST00000580498 HNRNPA1L2Q32P51 320 aaKnown RBP20.76■□□□□ 0.91
SMG8-204ENST00000580498 UAP1L1Q3KQV9 507 aa20.76■□□□□ 0.91
SMG8-204ENST00000580498 ARL13BQ3SXY8 428 aa20.76■□□□□ 0.91
SMG8-204ENST00000580498 ANO6Q4KMQ2 910 aa20.76■□□□□ 0.91
SMG8-204ENST00000580498 FBXL22Q6P050 247 aa20.76■□□□□ 0.91
SMG8-204ENST00000580498 ARCQ7LC44 396 aa20.76■□□□□ 0.91
SMG8-204ENST00000580498 ZNF366Q8N895 744 aa20.76■□□□□ 0.91
SMG8-204ENST00000580498 ERGIC2Q96RQ1 377 aa20.76■□□□□ 0.91
SMG8-204ENST00000580498 BPIFA3Q9BQP9 254 aa20.76■□□□□ 0.91
SMG8-204ENST00000580498 GTPBP2Q9BX10 602 aaKnown RBP20.76■□□□□ 0.91
SMG8-204ENST00000580498 PRSS16Q9NQE7 514 aa20.76■□□□□ 0.91
SMG8-204ENST00000580498 RXFP3Q9NSD7 469 aa20.76■□□□□ 0.91
SMG8-204ENST00000580498 SIK3Q9Y2K2 1263 aa20.76■□□□□ 0.91
SMG8-204ENST00000580498 TNRC6BQ9UPQ9 1833 aaKnown RBP20.76■□□□□ 0.91
SMG8-204ENST00000580498 MED19A0JLT2 244 aaPredicted RBP20.75■□□□□ 0.91
SMG8-204ENST00000580498 LRRC10BA6NIK2 292 aa20.75■□□□□ 0.91
SMG8-204ENST00000580498 ENGP17813 658 aa20.75■□□□□ 0.91
SMG8-204ENST00000580498 RDXP35241 583 aaKnown RBP20.75■□□□□ 0.91
SMG8-204ENST00000580498 MAPK8P45983 427 aa20.75■□□□□ 0.91
SMG8-204ENST00000580498 CXCR3P49682 368 aa20.75■□□□□ 0.91
SMG8-204ENST00000580498 KLK7P49862 253 aa20.75■□□□□ 0.91
SMG8-204ENST00000580498 CDH4P55283 916 aa20.75■□□□□ 0.91
SMG8-204ENST00000580498 JAM2P57087 298 aa20.75■□□□□ 0.91
SMG8-204ENST00000580498 KRT83P78385 493 aa20.75■□□□□ 0.91
SMG8-204ENST00000580498 PPP1R2P3Q6NXS1 205 aa20.75■□□□□ 0.91
SMG8-204ENST00000580498 CAVIN1Q6NZI2 390 aaKnown RBP20.75■□□□□ 0.91
SMG8-204ENST00000580498 DSG4Q86SJ6 1040 aa20.75■□□□□ 0.91
SMG8-204ENST00000580498 FAM124AQ86V42 546 aa20.75■□□□□ 0.91
SMG8-204ENST00000580498 SNX19Q92543 992 aa20.75■□□□□ 0.91
SMG8-204ENST00000580498 PRMT1Q99873 361 aaKnown RBP20.75■□□□□ 0.91
SMG8-204ENST00000580498 ZDHHC5Q9C0B5 715 aa20.75■□□□□ 0.91
SMG8-204ENST00000580498 MIR1-1HGQ9H1L0 117 aa20.75■□□□□ 0.91
SMG8-204ENST00000580498 SLC32A1Q9H598 525 aa20.75■□□□□ 0.91
SMG8-204ENST00000580498 SGK2Q9HBY8 427 aa20.75■□□□□ 0.91
SMG8-204ENST00000580498 HS3ST4Q9Y661 456 aa20.75■□□□□ 0.91
SMG8-204ENST00000580498 GON4LQ3T8J9 2241 aa20.75■□□□□ 0.91
SMG8-204ENST00000580498 A0A1B0GTW7 788 aa20.74■□□□□ 0.91
SMG8-204ENST00000580498 CALB1P05937 261 aa20.74■□□□□ 0.91
SMG8-204ENST00000580498 SDC4P31431 198 aa20.74■□□□□ 0.91
SMG8-204ENST00000580498 ARID5BQ14865 1188 aa20.74■□□□□ 0.91
SMG8-204ENST00000580498 FSCBQ5H9T9 825 aa20.74■□□□□ 0.91
SMG8-204ENST00000580498 SLC41A1Q8IVJ1 513 aa20.74■□□□□ 0.91
SMG8-204ENST00000580498 DHX40Q8IX18 779 aaKnown RBP20.74■□□□□ 0.91
SMG8-204ENST00000580498 CCDC114Q96M63 670 aa20.74■□□□□ 0.91
SMG8-204ENST00000580498 MUC3BQ9H195 1237 aa20.74■□□□□ 0.91
SMG8-204ENST00000580498 PIGVQ9NUD9 493 aa20.74■□□□□ 0.91
SMG8-204ENST00000580498 TMEM74BQ9NUR3 256 aa20.74■□□□□ 0.91
SMG8-204ENST00000580498 ARHGEF38Q9NXL2 777 aa20.74■□□□□ 0.91
SMG8-204ENST00000580498 NOCTQ9UK39 431 aaKnown RBP20.74■□□□□ 0.91
SMG8-204ENST00000580498 VPS28Q9UK41 221 aa20.74■□□□□ 0.91
SMG8-204ENST00000580498 FARP1Q9Y4F1 1045 aaPredicted RBP20.74■□□□□ 0.91
SMG8-204ENST00000580498 CACNA1AO00555 2505 aa20.73■□□□□ 0.91
SMG8-204ENST00000580498 OPHN1O60890 802 aa20.73■□□□□ 0.91
SMG8-204ENST00000580498 FERP16591 822 aa20.73■□□□□ 0.91
SMG8-204ENST00000580498 MMP8P22894 467 aa20.73■□□□□ 0.91
SMG8-204ENST00000580498 PLK1P53350 603 aa20.73■□□□□ 0.91
SMG8-204ENST00000580498 RPS14P62263 151 aaKnown RBP20.73■□□□□ 0.91
SMG8-204ENST00000580498 C6orf118Q5T5N4 469 aa20.73■□□□□ 0.91
SMG8-204ENST00000580498 DCAF12L1Q5VU92 463 aa20.73■□□□□ 0.91
SMG8-204ENST00000580498 MMS22LQ6ZRQ5 1243 aa20.73■□□□□ 0.91
SMG8-204ENST00000580498 USP30Q70CQ3 517 aa20.73■□□□□ 0.91
SMG8-204ENST00000580498 SLC20A1Q8WUM9 679 aa20.73■□□□□ 0.91
SMG8-204ENST00000580498 MYEOVQ96EZ4 313 aa20.73■□□□□ 0.91
SMG8-204ENST00000580498 LMLNQ96KR4 655 aa20.73■□□□□ 0.91
SMG8-204ENST00000580498 C1orf74Q96LT6 269 aa20.73■□□□□ 0.91
SMG8-204ENST00000580498 TBCBQ99426 244 aa20.73■□□□□ 0.91
SMG8-204ENST00000580498 OMDQ99983 421 aa20.73■□□□□ 0.91
SMG8-204ENST00000580498 C2orf49Q9BVC5 232 aaPredicted RBP20.73■□□□□ 0.91
SMG8-204ENST00000580498 SELENOOQ9BVL4 669 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms