RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 CDH4P55283 916 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 KRT83P78385 493 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 ZBED6P86452 979 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 CENPCQ03188 943 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 LMNB2Q03252 620 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 SULT2A1Q06520 285 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 SLC12A1Q13621 1099 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 C15orf59Q2T9L4 293 aaPredicted RBP6.75□□□□□ -1.33
TRAF4-213ENST00000578917 CCDC14Q49A88 953 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 AASDHQ4L235 1098 aaPredicted RBP6.75□□□□□ -1.33
TRAF4-213ENST00000578917 FIGNQ5HY92 759 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 SYCP2LQ5T4T6 812 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 C6orf118Q5T5N4 469 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 SH3PXD2AQ5TCZ1 1133 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 TMEM215Q68D42 235 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 WDR59Q6PJI9 974 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 ZNF571Q7Z3V5 609 aaPredicted RBP6.75□□□□□ -1.33
TRAF4-213ENST00000578917 CYP2U1Q7Z449 544 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 TFAP2DQ7Z6R9 452 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 SLFN11Q7Z7L1 901 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 C14orf80Q86SX3 495 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 ZNF354CQ86Y25 554 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 RGL4Q8IZJ4 473 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 MCOLN2Q8IZK6 566 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 APCDD1Q8J025 514 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 ZNF366Q8N895 744 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.75□□□□□ -1.33
TRAF4-213ENST00000578917 C3orf20Q8ND61 904 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 OR2T3Q8NH03 318 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 WFDC5Q8TCV5 224 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 FAM172AQ8WUF8 416 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 BAP1Q92560 729 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 IGSF8Q969P0 613 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 NT5C3BQ969T7 300 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 TTC17Q96AE7 1141 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 MYEOVQ96EZ4 313 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 TRIM11Q96F44 468 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 PGAP3Q96FM1 320 aaPredicted RBP6.75□□□□□ -1.33
TRAF4-213ENST00000578917 VCPIP1Q96JH7 1222 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 RPL10LQ96L21 214 aaKnown RBP6.75□□□□□ -1.33
TRAF4-213ENST00000578917 MRGPRX1Q96LB2 322 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 MCEEQ96PE7 176 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 HAPLN3Q96S86 360 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 PRMT1Q99873 361 aaKnown RBP6.75□□□□□ -1.33
TRAF4-213ENST00000578917 FEM1AQ9BSK4 669 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 XPO4Q9C0E2 1151 aaKnown RBP6.75□□□□□ -1.33
TRAF4-213ENST00000578917 DUSP15Q9H1R2 295 aaPredicted RBP6.75□□□□□ -1.33
TRAF4-213ENST00000578917 SLC6A17Q9H1V8 727 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 VPS45Q9NRW7 570 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 SEMA4GQ9NTN9 838 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 ARHGEF38Q9NXL2 777 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 MPP6Q9NZW5 540 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 MYO1AQ9UBC5 1043 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 ADAMTS1Q9UHI8 967 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 SLC25A13Q9UJS0 675 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 HCN2Q9UL51 889 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 CAPN11Q9UMQ6 739 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 ERVW-1Q9UQF0 538 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 FARP1Q9Y4F1 1045 aaPredicted RBP6.75□□□□□ -1.33
TRAF4-213ENST00000578917 SNX10Q9Y5X0 201 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 KMT2EQ8IZD2 1858 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 OTOGLQ3ZCN5 2332 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 GREB1Q4ZG55 1949 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 USP34Q70CQ2 3546 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 EDDM13A0A1B0GTR0 161 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.74□□□□□ -1.33
TRAF4-213ENST00000578917 A0A1W2PQJ5 194 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 C2CD4BA6NLJ0 364 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 TTC34A8MYJ7 566 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 PRR5-ARHGAP8B1AHC4 643 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 E9PAM4 449 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 CBX4O00257 560 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 KHNYNO15037 678 aaKnown RBP6.74□□□□□ -1.33
TRAF4-213ENST00000578917 DAPK3O43293 454 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 LRP3O75074 770 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 CNTN5O94779 1100 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 CFIP05156 583 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 SRPRAP08240 638 aaKnown RBP6.74□□□□□ -1.33
TRAF4-213ENST00000578917 PLEKP08567 350 aaPredicted RBP6.74□□□□□ -1.33
TRAF4-213ENST00000578917 MYBL1P10243 752 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 GZMAP12544 262 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 BCKDHBP21953 392 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 PSMA2P25787 234 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 MZF1P28698 734 aaPredicted RBP6.74□□□□□ -1.33
TRAF4-213ENST00000578917 CD6P30203 668 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 CASP14P31944 242 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 MPLP40238 635 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 CTSOP43234 321 aaPredicted RBP6.74□□□□□ -1.33
TRAF4-213ENST00000578917 SSR1P43307 286 aaKnown RBP6.74□□□□□ -1.33
TRAF4-213ENST00000578917 PTPN9P43378 593 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 RECQLP46063 649 aaPredicted RBP6.74□□□□□ -1.33
TRAF4-213ENST00000578917 ID4P47928 161 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 DNA2P51530 1060 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 TPMTP51580 245 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 ZNF143P52747 638 aaPredicted RBP6.74□□□□□ -1.33
TRAF4-213ENST00000578917 ATXN3P54252 364 aaPredicted RBP6.74□□□□□ -1.33
TRAF4-213ENST00000578917 RPL7AP62424 266 aaKnown RBP6.74□□□□□ -1.33
TRAF4-213ENST00000578917 ARHGAP8P85298 464 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 MAMLD1Q13495 774 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 EIF4EBP2Q13542 120 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms