RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 I6L893 689 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 RHOCP08134 193 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 GOT1P17174 413 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 OR1E1P30953 314 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 HOXC13P31276 330 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 GJA4P35212 333 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 DNA2P51530 1060 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 RPS24P62847 133 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 TNK2Q07912 1038 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 SLC12A1Q13621 1099 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 DPYSL3Q14195 570 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 CA9Q16790 459 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 TFDP3Q5H9I0 405 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 MANEALQ5VSG8 457 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 TXNRD3NBQ6F5E7 133 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 GRAMD4Q6IC98 578 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 TMCO3Q6UWJ1 677 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 ZNF783Q6ZMS7 281 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 CYP4V2Q6ZWL3 525 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 BZW1Q7L1Q6 419 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 BMP8AQ7Z5Y6 402 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 C14orf80Q86SX3 495 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 SETD3Q86TU7 594 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 RALGPS2Q86X27 583 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 TMEM25Q86YD3 366 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 CPNE8Q86YQ8 564 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 CFAP52Q8N1V2 620 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 LZTR1Q8N653 840 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 RTL3Q8N8U3 475 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 BHMTQ93088 406 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 IGSF8Q969P0 613 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 SHDQ96IW2 340 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 PRICKLE1Q96MT3 831 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 CARD9Q9H257 536 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 KLHL11Q9NVR0 708 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 TMEM248Q9NWD8 314 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 CWC15Q9P013 229 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 KIAA1522Q9P206 1035 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 DEC1Q9P2X7 70 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 SNX10Q9Y5X0 201 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 USP34Q70CQ2 3546 aa11.6□□□□□ -0.55
CDK5RAP3-210ENST00000578733 CTAGE9A4FU28 777 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 WASH4PA8MWX3 477 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 FAM72CH0Y354 149 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 ARNTLO00327 626 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 GFRA2O00451 464 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 KCNK3O14649 394 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 NARSO43776 548 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 CACNG3O60359 315 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 APODP05090 189 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 HOXD9P28356 352 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 DGKGP49619 791 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 PRKCQQ04759 706 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 PPP2R5EQ16537 467 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 ATP13A4Q4VNC1 1196 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 ANKRD20A8PQ5CZ79 823 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 CCDC181Q5TID7 509 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 FAM72AQ5TYM5 149 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 FAM72DQ6L9T8 149 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 SPOCD1Q6ZMY3 1216 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 FAM72BQ86X60 149 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 RFX6Q8HWS3 928 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 AHI1Q8N157 1196 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 CCDC26Q8TAB7 109 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 FIBINQ8TAL6 211 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 WFIKKN2Q8TEU8 576 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 UCMAQ8WVF2 138 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 MAIP1Q8WWC4 291 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 RAPGEF5Q92565 580 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 TSC1Q92574 1164 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 KRT35Q92764 455 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 RNF25Q96BH1 459 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 CSPG4P5Q96PW8 444 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 PNKPQ96T60 521 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 NAPGQ99747 312 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 IRF2BPLQ9H1B7 796 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 DNAJC17Q9NVM6 304 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 PLK2Q9NYY3 685 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 MPP6Q9NZW5 540 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 WNT16Q9UBV4 365 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 PACSIN2Q9UNF0 486 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 MRPS17Q9Y2R5 130 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 PIAS3Q9Y6X2 628 aa11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 MYO18AQ92614 2054 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-210ENST00000578733 ILVBLA1L0T0 632 aa11.58□□□□□ -0.56
CDK5RAP3-210ENST00000578733 SPECC1L-ADORA2AF8WAN1 911 aa11.58□□□□□ -0.56
CDK5RAP3-210ENST00000578733 ENC1O14682 589 aa11.58□□□□□ -0.56
CDK5RAP3-210ENST00000578733 APOL1O14791 398 aa11.58□□□□□ -0.56
CDK5RAP3-210ENST00000578733 DDX3YO15523 660 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-210ENST00000578733 RAMP2O60895 175 aa11.58□□□□□ -0.56
CDK5RAP3-210ENST00000578733 TULP3O75386 442 aa11.58□□□□□ -0.56
CDK5RAP3-210ENST00000578733 CNTN5O94779 1100 aa11.58□□□□□ -0.56
CDK5RAP3-210ENST00000578733 TJP3O95049 919 aa11.58□□□□□ -0.56
CDK5RAP3-210ENST00000578733 ERCC2P18074 760 aa11.58□□□□□ -0.56
CDK5RAP3-210ENST00000578733 CASQ1P31415 396 aa11.58□□□□□ -0.56
CDK5RAP3-210ENST00000578733 PTPN7P35236 360 aa11.58□□□□□ -0.56
CDK5RAP3-210ENST00000578733 PEX5P50542 639 aa11.58□□□□□ -0.56
CDK5RAP3-210ENST00000578733 ARSEP51690 589 aa11.58□□□□□ -0.56
CDK5RAP3-210ENST00000578733 YBEYP58557 167 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-210ENST00000578733 ETF1P62495 437 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms