RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 ZNF234Q14588 700 aa22.88■■□□□ 1.25
SMARCD2-206ENST00000577990 ARL13BQ3SXY8 428 aa22.88■■□□□ 1.25
SMARCD2-206ENST00000577990 FUT11Q495W5 492 aa22.88■■□□□ 1.25
SMARCD2-206ENST00000577990 DRC7Q8IY82 874 aa22.88■■□□□ 1.25
SMARCD2-206ENST00000577990 MDGA1Q8NFP4 955 aa22.88■■□□□ 1.25
SMARCD2-206ENST00000577990 OR8K1Q8NGG5 319 aa22.88■■□□□ 1.25
SMARCD2-206ENST00000577990 ZNF653Q96CK0 615 aa22.88■■□□□ 1.25
SMARCD2-206ENST00000577990 DNAJC7Q99615 494 aa22.88■■□□□ 1.25
SMARCD2-206ENST00000577990 ARHGAP20Q9P2F6 1191 aa22.88■■□□□ 1.25
SMARCD2-206ENST00000577990 CNOT8Q9UFF9 292 aaKnown RBP22.88■■□□□ 1.25
SMARCD2-206ENST00000577990 RAD54BQ9Y620 910 aa22.88■■□□□ 1.25
SMARCD2-206ENST00000577990 WASH3PC4AMC7 463 aa22.87■■□□□ 1.25
SMARCD2-206ENST00000577990 ATP5BP06576 529 aaKnown RBP22.87■■□□□ 1.25
SMARCD2-206ENST00000577990 MYBL1P10243 752 aa22.87■■□□□ 1.25
SMARCD2-206ENST00000577990 IRAK1P51617 712 aa22.87■■□□□ 1.25
SMARCD2-206ENST00000577990 LRRC31Q6UY01 552 aa22.87■■□□□ 1.25
SMARCD2-206ENST00000577990 ZNF683Q8IZ20 524 aa22.87■■□□□ 1.25
SMARCD2-206ENST00000577990 CYB5D2Q8WUJ1 264 aa22.87■■□□□ 1.25
SMARCD2-206ENST00000577990 CNPY3Q9BT09 278 aa22.87■■□□□ 1.25
SMARCD2-206ENST00000577990 BCCIPQ9P287 314 aaKnown RBP eCLIP22.87■■□□□ 1.25
SMARCD2-206ENST00000577990 INTS6Q9UL03 887 aaKnown RBP22.87■■□□□ 1.25
SMARCD2-206ENST00000577990 RAB23Q9ULC3 237 aa22.87■■□□□ 1.25
SMARCD2-206ENST00000577990 SPTBN2O15020 2390 aa22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 MUC22E2RYF6 1773 aaPredicted RBP22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 CLDN11O75508 207 aa22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 MOCS3O95396 460 aa22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 DLDP09622 509 aaKnown RBP22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 DESP17661 470 aa22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 ADRA1BP35368 520 aa22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 CSKP41240 450 aa22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 CDH4P55283 916 aa22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 OGDHQ02218 1023 aa22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 SIM2Q14190 667 aaPredicted RBP22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 STARD3Q14849 445 aa22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 ARID5BQ14865 1188 aa22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 PITRM1Q5JRX3 1037 aa22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 KIAA1211LQ6NV74 962 aa22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 SERPINA13PQ6UXR4 307 aa22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 GAS2L3Q86XJ1 694 aa22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 HMGB4Q8WW32 186 aa22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 GAB3Q8WWW8 586 aa22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 TTC17Q96AE7 1141 aa22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 TPSD1Q9BZJ3 242 aa22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 CD248Q9HCU0 757 aa22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 GMEB2Q9UKD1 530 aa22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 PLA2G4CQ9UP65 541 aa22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 SCINQ9Y6U3 715 aa22.86■■□□□ 1.25
SMARCD2-206ENST00000577990 A0A087X0T9 212 aa22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 DRGXA6NNA5 263 aa22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 E9PAM4 449 aa22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 MFAP3LO75121 409 aa22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 RPP40O75818 363 aaKnown RBP22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 FAM228BP0C875 321 aa22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 PRKCHP24723 683 aa22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 OXCT1P55809 520 aa22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 ZNF177Q13360 481 aaPredicted RBP22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 SLC12A1Q13621 1099 aa22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 PTPRNQ16849 979 aa22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 TSR1Q2NL82 804 aaKnown RBP22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 PLEKHG6Q3KR16 790 aa22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 FNDC3BQ53EP0 1204 aaKnown RBP22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 CXorf57Q6NSI4 855 aaKnown RBP22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 CEP68Q76N32 757 aa22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 TMC6Q7Z403 805 aa22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 CCDC185Q8N715 623 aa22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 NTAN1Q96AB6 310 aa22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 PARD6AQ9NPB6 346 aa22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 ZNHIT6Q9NWK9 470 aaKnown RBP22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 USP18Q9UMW8 372 aa22.85■■□□□ 1.25
SMARCD2-206ENST00000577990 CKAP5Q14008 2032 aa22.84■■□□□ 1.25
SMARCD2-206ENST00000577990 IGLV3-10A0A075B6K4 115 aa22.84■■□□□ 1.25
SMARCD2-206ENST00000577990 ZBTB24O43167 697 aaPredicted RBP22.84■■□□□ 1.25
SMARCD2-206ENST00000577990 CNTN5O94779 1100 aa22.84■■□□□ 1.25
SMARCD2-206ENST00000577990 ASLP04424 464 aa22.84■■□□□ 1.25
SMARCD2-206ENST00000577990 EIF4A3P38919 411 aaKnown RBP22.84■■□□□ 1.25
SMARCD2-206ENST00000577990 ALFQ53S48 1182 aa22.84■■□□□ 1.25
SMARCD2-206ENST00000577990 LAIR1Q6GTX8 287 aa22.84■■□□□ 1.25
SMARCD2-206ENST00000577990 PGBD3Q8N328 593 aa22.84■■□□□ 1.25
SMARCD2-206ENST00000577990 ERLEC1Q96DZ1 483 aa22.84■■□□□ 1.25
SMARCD2-206ENST00000577990 OSBPL2Q9H1P3 480 aa22.84■■□□□ 1.25
SMARCD2-206ENST00000577990 MRPL47Q9HD33 250 aaKnown RBP22.84■■□□□ 1.25
SMARCD2-206ENST00000577990 ABHD10Q9NUJ1 306 aa22.84■■□□□ 1.25
SMARCD2-206ENST00000577990 MYO1AQ9UBC5 1043 aa22.84■■□□□ 1.25
SMARCD2-206ENST00000577990 TMEM191CA6NGB0 347 aa22.83■■□□□ 1.25
SMARCD2-206ENST00000577990 SYNCRIPO60506 623 aaKnown RBP22.83■■□□□ 1.25
SMARCD2-206ENST00000577990 SRGAP2O75044 1071 aa22.83■■□□□ 1.25
SMARCD2-206ENST00000577990 GABRG2P18507 467 aa22.83■■□□□ 1.25
SMARCD2-206ENST00000577990 PSMA2P25787 234 aa22.83■■□□□ 1.25
SMARCD2-206ENST00000577990 ADKP55263 362 aaKnown RBP22.83■■□□□ 1.25
SMARCD2-206ENST00000577990 NRG1Q02297 640 aaPredicted RBP22.83■■□□□ 1.25
SMARCD2-206ENST00000577990 SPEM2Q0P670 501 aa22.83■■□□□ 1.25
SMARCD2-206ENST00000577990 SCAPQ12770 1279 aa22.83■■□□□ 1.25
SMARCD2-206ENST00000577990 TBX2Q13207 712 aaPredicted RBP22.83■■□□□ 1.25
SMARCD2-206ENST00000577990 USP39Q53GS9 565 aaKnown RBP22.83■■□□□ 1.25
SMARCD2-206ENST00000577990 SCYL2Q6P3W7 929 aa22.83■■□□□ 1.25
SMARCD2-206ENST00000577990 ALKBH5Q6P6C2 394 aaKnown RBP22.83■■□□□ 1.25
SMARCD2-206ENST00000577990 CNGA4Q8IV77 575 aa22.83■■□□□ 1.25
SMARCD2-206ENST00000577990 APCDD1Q8J025 514 aa22.83■■□□□ 1.25
SMARCD2-206ENST00000577990 FNIP1Q8TF40 1166 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms