RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 SP9P0CG40 484 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 CHRM1P11229 460 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 HOXB2P14652 356 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 CD70P32970 193 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 HTR7P34969 479 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 PCK1P35558 622 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 SULT2A1Q06520 285 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 ZNF252P-AS1Q0IIN9 211 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 STARD3Q14849 445 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 SPA17Q15506 151 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 PLEKHG6Q3KR16 790 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 RAB6CQ53S08 254 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 C6orf118Q5T5N4 469 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 EMC10Q5UCC4 262 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 MBLAC2Q68D91 279 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 SETD3Q86TU7 594 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 CIR1Q86X95 450 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 ZNF683Q8IZ20 524 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 MAML2Q8IZL2 1156 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 NIPA2Q8N8Q9 360 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 ATOH1Q92858 354 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 TBC1D31Q96DN5 1066 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 ARHGEF26Q96DR7 871 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 GABRG3Q99928 467 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 TRIM7Q9C029 511 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 ZYG11BQ9C0D3 744 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 RAB6CQ9H0N0 254 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 POLMQ9NP87 494 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 TMPRSS4Q9NRS4 437 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 ZSCAN32Q9NX65 697 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 THAP10Q9P2Z0 257 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 PPARGC1AQ9UBK2 798 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 PLA2G4CQ9UP65 541 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 PCDHGA2Q9Y5H1 932 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 SNX10Q9Y5X0 201 aa13.09□□□□□ -0.31
CDK5RAP3-203ENST00000577442 ZFHX2Q9C0A1 2572 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 CCDC163A0A0D9SF12 145 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 K7ESF4 209 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 SGK1O00141 431 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 SRGAP2O75044 1071 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 RHOCP08134 193 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 DLDP09622 509 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 TDGF1P13385 188 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 FECHP22830 423 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 MIPP30301 263 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 L1CAMP32004 1257 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 CSKP41240 450 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ZNF135P52742 658 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 GSDMDP57764 484 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ST8SIA6P61647 398 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 CRY1Q16526 586 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 FUT11Q495W5 492 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 FNDC3BQ53EP0 1204 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 PITRM1Q5JRX3 1037 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 MANEALQ5VSG8 457 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 RNF219Q5W0B1 726 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 SERPINA13PQ6UXR4 307 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ZNF783Q6ZMS7 281 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ADIPOR2Q86V24 386 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 PSTKQ8IV42 348 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 RHOT2Q8IXI1 618 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 SPC24Q8NBT2 197 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ATRIPQ8WXE1 791 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 RFFLQ8WZ73 363 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 TTC17Q96AE7 1141 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 LMLNQ96KR4 655 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 HHIPQ96QV1 700 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 PACSIN1Q9BY11 444 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 CACNA2D2Q9NY47 1150 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 DONSONQ9NYP3 566 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 FZD10Q9ULW2 581 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 AP4E1Q9UPM8 1137 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 TBC1D30Q9Y2I9 924 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 OTOGLQ3ZCN5 2332 aa13.08□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ADAM23O75077 832 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 LRCH4O75427 683 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 CNTN5O94779 1100 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 LRIG2O94898 1065 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 RHOQP17081 205 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ETFBP38117 255 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 MAPKAPK2P49137 400 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 IRAK1P51617 712 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 PLK1P53350 603 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ZNF234Q14588 700 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ALFQ53S48 1182 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 FSCBQ5H9T9 825 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ERMARDQ5T6L9 678 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 TMEM215Q68D42 235 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 CXorf57Q6NSI4 855 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 RWDD4Q6NW29 188 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 TSSK4Q6SA08 328 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 TFAP2DQ7Z6R9 452 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 LONP2Q86WA8 852 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 KDM1BQ8NB78 822 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 NELL1Q92832 810 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 MUC3BQ9H195 1237 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 CATSPERBQ9H7T0 1116 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 C2orf42Q9NWW7 574 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 MPP6Q9NZW5 540 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 EBF1Q9UH73 591 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms