RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 STIM2Q9P246 746 aa13.85□□□□□ -0.19
COPS3-214ENST00000577246 CFAP45Q9UL16 551 aa13.85□□□□□ -0.19
COPS3-214ENST00000577246 KIAA1257Q9ULG3 409 aa13.85□□□□□ -0.19
COPS3-214ENST00000577246 PCDHA7Q9UN72 937 aa13.85□□□□□ -0.19
COPS3-214ENST00000577246 DMTF1Q9Y222 760 aa13.85□□□□□ -0.19
COPS3-214ENST00000577246 TBC1D3DA0A087WVF3 549 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 TBC1D3IA0A087WXS9 549 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 TBC1D3EA0A087X179 549 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 TBC1D3KA0A087X1G2 549 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 TBC1D3FA6NER0 549 aaPredicted RBP13.84□□□□□ -0.19
COPS3-214ENST00000577246 TBC1D3LB9A6J9 549 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 LATO43561 262 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 ACTN4O43707 911 aaKnown RBP13.84□□□□□ -0.19
COPS3-214ENST00000577246 TBC1D3HP0C7X1 549 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 CD19P15391 556 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 PSMD8P48556 350 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 TBX4P57082 545 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 ECT2LQ008S8 904 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 INSM1Q01101 510 aaPredicted RBP13.84□□□□□ -0.19
COPS3-214ENST00000577246 KCNH2Q12809 1159 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 ADAM9Q13443 819 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 ELAVL3Q14576 367 aaKnown RBP13.84□□□□□ -0.19
COPS3-214ENST00000577246 FAM133BQ5BKY9 247 aaKnown RBP13.84□□□□□ -0.19
COPS3-214ENST00000577246 TBC1D3GQ6DHY5 549 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 TBC1D3CQ6IPX1 549 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 DSG4Q86SJ6 1040 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 ERICH1Q86X53 443 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 TBC1D3Q8IZP1 549 aaPredicted RBP13.84□□□□□ -0.19
COPS3-214ENST00000577246 CARNMT1Q8N4J0 409 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 TATDN2Q93075 761 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 MRGPRX3Q96LB0 322 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 FOXD4L1Q9NU39 408 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 ERVW-1Q9UQF0 538 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 ASXL3Q9C0F0 2248 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 TMEM131Q92545 1883 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 ITIH6Q6UXX5 1313 aa13.84□□□□□ -0.19
COPS3-214ENST00000577246 CABIN1Q9Y6J0 2220 aa13.83□□□□□ -0.2
COPS3-214ENST00000577246 C10orf142B7Z368 130 aa13.83□□□□□ -0.2
COPS3-214ENST00000577246 TULP2O00295 520 aa13.83□□□□□ -0.2
COPS3-214ENST00000577246 SLC7A4O43246 635 aa13.83□□□□□ -0.2
COPS3-214ENST00000577246 KALRNO60229 2985 aa13.83□□□□□ -0.2
COPS3-214ENST00000577246 MT-CO3P00414 261 aa13.83□□□□□ -0.2
COPS3-214ENST00000577246 IL1BP01584 269 aa13.83□□□□□ -0.2
COPS3-214ENST00000577246 VDRP11473 427 aa13.83□□□□□ -0.2
COPS3-214ENST00000577246 SLC6A4P31645 630 aa13.83□□□□□ -0.2
COPS3-214ENST00000577246 DAOAP59103 153 aa13.83□□□□□ -0.2
COPS3-214ENST00000577246 DAB2P98082 770 aa13.83□□□□□ -0.2
COPS3-214ENST00000577246 BNIP3Q12983 259 aa13.83□□□□□ -0.2
COPS3-214ENST00000577246 ZNF211Q13398 564 aaPredicted RBP13.83□□□□□ -0.2
COPS3-214ENST00000577246 STAT4Q14765 748 aa13.83□□□□□ -0.2
COPS3-214ENST00000577246 PITRM1Q5JRX3 1037 aa13.83□□□□□ -0.2
COPS3-214ENST00000577246 AADATQ8N5Z0 425 aa13.83□□□□□ -0.2
COPS3-214ENST00000577246 LMLNQ96KR4 655 aa13.83□□□□□ -0.2
COPS3-214ENST00000577246 SERPINB11Q96P15 392 aa13.83□□□□□ -0.2
COPS3-214ENST00000577246 EVA1BQ9NVM1 165 aa13.83□□□□□ -0.2
COPS3-214ENST00000577246 GOLGA6L7A0A1B0GV03 622 aa13.82□□□□□ -0.2
COPS3-214ENST00000577246 TTC34A8MYJ7 566 aa13.82□□□□□ -0.2
COPS3-214ENST00000577246 K7ELQ4 463 aaPredicted RBP13.82□□□□□ -0.2
COPS3-214ENST00000577246 WNT9AO14904 365 aa13.82□□□□□ -0.2
COPS3-214ENST00000577246 FBXO21O94952 628 aa13.82□□□□□ -0.2
COPS3-214ENST00000577246 RHOBTB3O94955 611 aa13.82□□□□□ -0.2
COPS3-214ENST00000577246 LUC7L3O95232 432 aaKnown RBP13.82□□□□□ -0.2
COPS3-214ENST00000577246 EPB41P11171 864 aaKnown RBP13.82□□□□□ -0.2
COPS3-214ENST00000577246 LCP1P13796 627 aa13.82□□□□□ -0.2
COPS3-214ENST00000577246 MZF1P28698 734 aaPredicted RBP13.82□□□□□ -0.2
COPS3-214ENST00000577246 NNTQ13423 1086 aa13.82□□□□□ -0.2
COPS3-214ENST00000577246 CUL2Q13617 745 aa13.82□□□□□ -0.2
COPS3-214ENST00000577246 PROX2Q3B8N5 592 aa13.82□□□□□ -0.2
COPS3-214ENST00000577246 PKDCCQ504Y2 493 aa13.82□□□□□ -0.2
COPS3-214ENST00000577246 FAM46CQ5VWP2 391 aa13.82□□□□□ -0.2
COPS3-214ENST00000577246 KDM7AQ6ZMT4 941 aa13.82□□□□□ -0.2
COPS3-214ENST00000577246 KANSL1Q7Z3B3 1105 aa13.82□□□□□ -0.2
COPS3-214ENST00000577246 GUF1Q8N442 669 aaKnown RBP13.82□□□□□ -0.2
COPS3-214ENST00000577246 SEMA4DQ92854 862 aa13.82□□□□□ -0.2
COPS3-214ENST00000577246 PRICKLE1Q96MT3 831 aaPredicted RBP13.82□□□□□ -0.2
COPS3-214ENST00000577246 DEPDC7Q96QD5 511 aa13.82□□□□□ -0.2
COPS3-214ENST00000577246 SPAG5Q96R06 1193 aa13.82□□□□□ -0.2
COPS3-214ENST00000577246 FAM129BQ96TA1 746 aa13.82□□□□□ -0.2
COPS3-214ENST00000577246 TRIM62Q9BVG3 475 aa13.82□□□□□ -0.2
COPS3-214ENST00000577246 INTS6Q9UL03 887 aaKnown RBP13.82□□□□□ -0.2
COPS3-214ENST00000577246 NUMA1Q14980 2115 aa13.81□□□□□ -0.2
COPS3-214ENST00000577246 PRAMEF26H0Y7S4 382 aa13.81□□□□□ -0.2
COPS3-214ENST00000577246 RNGTTO60942 597 aaKnown RBP13.81□□□□□ -0.2
COPS3-214ENST00000577246 LTFP02788 710 aa13.81□□□□□ -0.2
COPS3-214ENST00000577246 ALPPL2P10696 532 aa13.81□□□□□ -0.2
COPS3-214ENST00000577246 TBXAS1P24557 533 aaPredicted RBP13.81□□□□□ -0.2
COPS3-214ENST00000577246 MCCD1P59942 119 aaPredicted RBP13.81□□□□□ -0.2
COPS3-214ENST00000577246 ERVPABLB-1P60509 514 aa13.81□□□□□ -0.2
COPS3-214ENST00000577246 RPS24P62847 133 aaKnown RBP13.81□□□□□ -0.2
COPS3-214ENST00000577246 NUCB2P80303 420 aa13.81□□□□□ -0.2
COPS3-214ENST00000577246 SULT2A1Q06520 285 aa13.81□□□□□ -0.2
COPS3-214ENST00000577246 SLC12A1Q13621 1099 aa13.81□□□□□ -0.2
COPS3-214ENST00000577246 EDRF1Q3B7T1 1238 aa13.81□□□□□ -0.2
COPS3-214ENST00000577246 SETMARQ53H47 684 aaPredicted RBP13.81□□□□□ -0.2
COPS3-214ENST00000577246 MS4A13Q5J8X5 152 aa13.81□□□□□ -0.2
COPS3-214ENST00000577246 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.81□□□□□ -0.2
COPS3-214ENST00000577246 TRIM69Q86WT6 500 aa13.81□□□□□ -0.2
COPS3-214ENST00000577246 SPATS2Q86XZ4 545 aaKnown RBP13.81□□□□□ -0.2
COPS3-214ENST00000577246 STK40Q8N2I9 435 aa13.81□□□□□ -0.2
COPS3-214ENST00000577246 UBA3Q8TBC4 463 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms