RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 UNC93AQ86WB7 457 aa16.01■□□□□ 0.15
NUP88-207ENST00000573584 RTKNQ9BST9 563 aa16.01■□□□□ 0.15
NUP88-207ENST00000573584 TBC1D30Q9Y2I9 924 aa16.01■□□□□ 0.15
NUP88-207ENST00000573584 ANKRD33BA6NCL7 494 aa16.01■□□□□ 0.15
NUP88-207ENST00000573584 F7P08709 466 aaPredicted RBP16.01■□□□□ 0.15
NUP88-207ENST00000573584 SPRP35270 261 aaPredicted RBP16.01■□□□□ 0.15
NUP88-207ENST00000573584 GRM5P41594 1212 aa16.01■□□□□ 0.15
NUP88-207ENST00000573584 SERPINB8P50452 374 aa16.01■□□□□ 0.15
NUP88-207ENST00000573584 BCAT1P54687 386 aa16.01■□□□□ 0.15
NUP88-207ENST00000573584 DYNC1I2Q13409 638 aaKnown RBP16.01■□□□□ 0.15
NUP88-207ENST00000573584 PDK1Q15118 436 aa16.01■□□□□ 0.15
NUP88-207ENST00000573584 FSTL4Q6MZW2 842 aa16.01■□□□□ 0.15
NUP88-207ENST00000573584 PID1Q7Z2X4 250 aa16.01■□□□□ 0.15
NUP88-207ENST00000573584 LINC01465Q8N7H1 131 aa16.01■□□□□ 0.15
NUP88-207ENST00000573584 ICA1LQ8NDH6 482 aa16.01■□□□□ 0.15
NUP88-207ENST00000573584 OR52K1Q8NGK4 314 aa16.01■□□□□ 0.15
NUP88-207ENST00000573584 LENG8Q96PV6 779 aaPredicted RBP16.01■□□□□ 0.15
NUP88-207ENST00000573584 RBBP8Q99708 897 aa16.01■□□□□ 0.15
NUP88-207ENST00000573584 PRDM12Q9H4Q4 367 aa16.01■□□□□ 0.15
NUP88-207ENST00000573584 TMPRSS4Q9NRS4 437 aa16.01■□□□□ 0.15
NUP88-207ENST00000573584 RCOR3Q9P2K3 495 aaPredicted RBP16.01■□□□□ 0.15
NUP88-207ENST00000573584 SYNJ2BP-COX16A0A087WUM0 186 aa16■□□□□ 0.15
NUP88-207ENST00000573584 H3BNX3 289 aa16■□□□□ 0.15
NUP88-207ENST00000573584 CNMDO75829 334 aa16■□□□□ 0.15
NUP88-207ENST00000573584 SLC25A27O95847 323 aa16■□□□□ 0.15
NUP88-207ENST00000573584 GRM2Q14416 872 aa16■□□□□ 0.15
NUP88-207ENST00000573584 PDK3Q15120 406 aa16■□□□□ 0.15
NUP88-207ENST00000573584 GJC2Q5T442 439 aaPredicted RBP16■□□□□ 0.15
NUP88-207ENST00000573584 SDCCAG8Q86SQ7 713 aaPredicted RBP16■□□□□ 0.15
NUP88-207ENST00000573584 MAPK15Q8TD08 544 aa16■□□□□ 0.15
NUP88-207ENST00000573584 RNF139Q8WU17 664 aa16■□□□□ 0.15
NUP88-207ENST00000573584 NCSTNQ92542 709 aa16■□□□□ 0.15
NUP88-207ENST00000573584 FAM149B1Q96BN6 582 aa16■□□□□ 0.15
NUP88-207ENST00000573584 AGAP3Q96P47 875 aa16■□□□□ 0.15
NUP88-207ENST00000573584 COX16Q9P0S2 106 aa16■□□□□ 0.15
NUP88-207ENST00000573584 TUBGCP4Q9UGJ1 667 aa16■□□□□ 0.15
NUP88-207ENST00000573584 SSX2IPQ9Y2D8 614 aa16■□□□□ 0.15
NUP88-207ENST00000573584 A0A096LPK6 155 aa16■□□□□ 0.15
NUP88-207ENST00000573584 CASQ2O14958 399 aaPredicted RBP16■□□□□ 0.15
NUP88-207ENST00000573584 CREB3O43889 395 aa16■□□□□ 0.15
NUP88-207ENST00000573584 USP12O75317 370 aa16■□□□□ 0.15
NUP88-207ENST00000573584 LGALS2P05162 132 aa16■□□□□ 0.15
NUP88-207ENST00000573584 PIM1P11309 404 aaPredicted RBP16■□□□□ 0.15
NUP88-207ENST00000573584 ACAT1P24752 427 aaKnown RBP16■□□□□ 0.15
NUP88-207ENST00000573584 SCNN1AP37088 669 aa16■□□□□ 0.15
NUP88-207ENST00000573584 MATKP42679 507 aa16■□□□□ 0.15
NUP88-207ENST00000573584 SULT1E1P49888 294 aa16■□□□□ 0.15
NUP88-207ENST00000573584 METTL21CQ5VZV1 264 aa16■□□□□ 0.15
NUP88-207ENST00000573584 DLK2Q6UY11 383 aa16■□□□□ 0.15
NUP88-207ENST00000573584 DEFB106AQ8N104 65 aa16■□□□□ 0.15
NUP88-207ENST00000573584 TDRD5Q8NAT2 981 aaKnown RBP16■□□□□ 0.15
NUP88-207ENST00000573584 NDRG1Q92597 394 aaKnown RBP16■□□□□ 0.15
NUP88-207ENST00000573584 C18orf25Q96B23 403 aaPredicted RBP16■□□□□ 0.15
NUP88-207ENST00000573584 ZNF669Q96BR6 464 aaPredicted RBP16■□□□□ 0.15
NUP88-207ENST00000573584 AGAP2Q99490 1192 aa16■□□□□ 0.15
NUP88-207ENST00000573584 GORASP1Q9BQQ3 440 aa16■□□□□ 0.15
NUP88-207ENST00000573584 LRRC40Q9H9A6 602 aa16■□□□□ 0.15
NUP88-207ENST00000573584 TXNRD2Q9NNW7 524 aa16■□□□□ 0.15
NUP88-207ENST00000573584 VCX3AQ9NNX9 186 aa16■□□□□ 0.15
NUP88-207ENST00000573584 RNF19AQ9NV58 838 aa16■□□□□ 0.15
NUP88-207ENST00000573584 SNTG2Q9NY99 539 aa16■□□□□ 0.15
NUP88-207ENST00000573584 ADAM28Q9UKQ2 775 aa16■□□□□ 0.15
NUP88-207ENST00000573584 PACSIN3Q9UKS6 424 aa16■□□□□ 0.15
NUP88-207ENST00000573584 G3V2L1 256 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 AIM2O14862 343 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 PEX1O43933 1283 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 SERPINB5P36952 375 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 MAGEA12P43365 314 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 FOLH1Q04609 750 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 Q3C1V9 767 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 ANKRD20A4Q4UJ75 823 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 POTEAQ6S8J7 498 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 SREK1Q8WXA9 508 aaKnown RBP15.99■□□□□ 0.15
NUP88-207ENST00000573584 OR52B2Q96RD2 323 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 CAB39LQ9H9S4 337 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 TCF7L2Q9NQB0 619 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 INPP5FQ9Y2H2 1132 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 TNS1Q9HBL0 1735 aaKnown RBP15.99■□□□□ 0.15
NUP88-207ENST00000573584 KCNK1O00180 336 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 TRIM13O60858 407 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 PABPC4LP0CB38 370 aaKnown RBP15.99■□□□□ 0.15
NUP88-207ENST00000573584 LMO2P25791 158 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 ABCG1P45844 678 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 ACADSBP45954 432 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 LIMK2P53671 638 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 DLG2Q15700 870 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 SLC25A52Q3SY17 297 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 DCAF6Q58WW2 860 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 GLRA4Q5JXX5 417 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 TP53INP2Q8IXH6 220 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 ISL2Q96A47 359 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 ZCWPW1Q9H0M4 648 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 IGSF9Q9P2J2 1179 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 PPP2R3BQ9Y5P8 575 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 SCN1AP35498 2009 aa15.99■□□□□ 0.15
NUP88-207ENST00000573584 DNAJC25-GNG10A0A024R161 153 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 GOLGA8QA0A0J9YX86 632 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 GOLGA8OA6NCC3 632 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 CAPN8A6NHC0 703 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 KPNA7A9QM74 516 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms