RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 APCDD1Q8J025 514 aa21.31■■□□□ 1
CHMP6-204ENST00000572778 ZNF366Q8N895 744 aa21.31■■□□□ 1
CHMP6-204ENST00000572778 TTC17Q96AE7 1141 aa21.31■■□□□ 1
CHMP6-204ENST00000572778 SPACA7Q96KW9 195 aa21.31■■□□□ 1
CHMP6-204ENST00000572778 C1orf74Q96LT6 269 aa21.31■■□□□ 1
CHMP6-204ENST00000572778 HAPLN3Q96S86 360 aa21.31■■□□□ 1
CHMP6-204ENST00000572778 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.31■■□□□ 1
CHMP6-204ENST00000572778 USP34Q70CQ2 3546 aa21.3■■□□□ 1
CHMP6-204ENST00000572778 PIEZO1Q92508 2521 aa21.3■■□□□ 1
CHMP6-204ENST00000572778 RTN2O75298 545 aa21.3■■□□□ 1
CHMP6-204ENST00000572778 CLDN11O75508 207 aa21.3■■□□□ 1
CHMP6-204ENST00000572778 CNTN5O94779 1100 aa21.3■■□□□ 1
CHMP6-204ENST00000572778 RHOBTB1O94844 696 aa21.3■■□□□ 1
CHMP6-204ENST00000572778 ASLP04424 464 aa21.3■■□□□ 1
CHMP6-204ENST00000572778 SERPING1P05155 500 aa21.3■■□□□ 1
CHMP6-204ENST00000572778 RETP07949 1114 aa21.3■■□□□ 1
CHMP6-204ENST00000572778 GZMAP12544 262 aa21.3■■□□□ 1
CHMP6-204ENST00000572778 P2RY2P41231 377 aa21.3■■□□□ 1
CHMP6-204ENST00000572778 CDH4P55283 916 aa21.3■■□□□ 1
CHMP6-204ENST00000572778 OXCT1P55809 520 aa21.3■■□□□ 1
CHMP6-204ENST00000572778 SLC12A1Q13621 1099 aa21.3■■□□□ 1
CHMP6-204ENST00000572778 PPP1R15BQ5SWA1 713 aa21.3■■□□□ 1
CHMP6-204ENST00000572778 ACBD5Q5T8D3 534 aaPredicted RBP21.3■■□□□ 1
CHMP6-204ENST00000572778 KIAA1324Q6UXG2 1013 aaKnown RBP21.3■■□□□ 1
CHMP6-204ENST00000572778 C11orf74Q86VG3 221 aa21.3■■□□□ 1
CHMP6-204ENST00000572778 CENPIQ92674 756 aaPredicted RBP21.3■■□□□ 1
CHMP6-204ENST00000572778 MRGPRX1Q96LB2 322 aa21.3■■□□□ 1
CHMP6-204ENST00000572778 DUSP15Q9H1R2 295 aaPredicted RBP21.3■■□□□ 1
CHMP6-204ENST00000572778 TMEM245Q9H330 911 aa21.3■■□□□ 1
CHMP6-204ENST00000572778 PARVAQ9NVD7 372 aa21.3■■□□□ 1
CHMP6-204ENST00000572778 E9PAM4 449 aa21.29■■□□□ 1
CHMP6-204ENST00000572778 MAP3K13O43283 966 aa21.29■■□□□ 1
CHMP6-204ENST00000572778 CCP110O43303 1012 aa21.29■■□□□ 1
CHMP6-204ENST00000572778 ATMINO43313 823 aaPredicted RBP21.29■■□□□ 1
CHMP6-204ENST00000572778 BCKDHBP21953 392 aa21.29■■□□□ 1
CHMP6-204ENST00000572778 MZF1P28698 734 aaPredicted RBP21.29■■□□□ 1
CHMP6-204ENST00000572778 ADRA1BP35368 520 aa21.29■■□□□ 1
CHMP6-204ENST00000572778 ZNF143P52747 638 aaPredicted RBP21.29■■□□□ 1
CHMP6-204ENST00000572778 HDAC4P56524 1084 aa21.29■■□□□ 1
CHMP6-204ENST00000572778 MAP7D1Q3KQU3 841 aa21.29■■□□□ 1
CHMP6-204ENST00000572778 C5orf22Q49AR2 442 aa21.29■■□□□ 1
CHMP6-204ENST00000572778 ALFQ53S48 1182 aa21.29■■□□□ 1
CHMP6-204ENST00000572778 RNF219Q5W0B1 726 aaPredicted RBP21.29■■□□□ 1
CHMP6-204ENST00000572778 SPECC1LQ69YQ0 1117 aa21.29■■□□□ 1
CHMP6-204ENST00000572778 CXorf57Q6NSI4 855 aaKnown RBP21.29■■□□□ 1
CHMP6-204ENST00000572778 VPS36Q86VN1 386 aa21.29■■□□□ 1
CHMP6-204ENST00000572778 ZNF683Q8IZ20 524 aa21.29■■□□□ 1
CHMP6-204ENST00000572778 FRMD1Q8N878 549 aa21.29■■□□□ 1
CHMP6-204ENST00000572778 ZC3H10Q96K80 434 aaKnown RBP21.29■■□□□ 1
CHMP6-204ENST00000572778 MPP6Q9NZW5 540 aa21.29■■□□□ 1
CHMP6-204ENST00000572778 ADAMTS1Q9UHI8 967 aa21.29■■□□□ 1
CHMP6-204ENST00000572778 DRGXA6NNA5 263 aa21.28■■□□□ 1
CHMP6-204ENST00000572778 PLEKP08567 350 aaPredicted RBP21.28■■□□□ 1
CHMP6-204ENST00000572778 DESP17661 470 aa21.28■■□□□ 1
CHMP6-204ENST00000572778 CTSOP43234 321 aaPredicted RBP21.28■■□□□ 1
CHMP6-204ENST00000572778 ECT2LQ008S8 904 aa21.28■■□□□ 1
CHMP6-204ENST00000572778 MAMLD1Q13495 774 aa21.28■■□□□ 1
CHMP6-204ENST00000572778 PLEKHA7Q6IQ23 1121 aa21.28■■□□□ 1
CHMP6-204ENST00000572778 SCYL2Q6P3W7 929 aa21.28■■□□□ 1
CHMP6-204ENST00000572778 TMPRSS6Q8IU80 811 aa21.28■■□□□ 1
CHMP6-204ENST00000572778 ZNF653Q96CK0 615 aa21.28■■□□□ 1
CHMP6-204ENST00000572778 LOXL4Q96JB6 756 aa21.28■■□□□ 1
CHMP6-204ENST00000572778 PPP1R9BQ96SB3 815 aa21.28■■□□□ 1
CHMP6-204ENST00000572778 CNPY3Q9BT09 278 aa21.28■■□□□ 1
CHMP6-204ENST00000572778 MKRN2Q9H000 416 aaKnown RBP21.28■■□□□ 1
CHMP6-204ENST00000572778 PRDM16Q9HAZ2 1276 aa21.28■■□□□ 1
CHMP6-204ENST00000572778 CNOT8Q9UFF9 292 aaKnown RBP21.28■■□□□ 1
CHMP6-204ENST00000572778 SUN2Q9UH99 717 aa21.28■■□□□ 1
CHMP6-204ENST00000572778 CYP8B1Q9UNU6 501 aa21.28■■□□□ 1
CHMP6-204ENST00000572778 ERVW-1Q9UQF0 538 aa21.28■■□□□ 1
CHMP6-204ENST00000572778 ZNF217O75362 1048 aa21.27■■□□□ 1
CHMP6-204ENST00000572778 SPEM2Q0P670 501 aa21.27■■□□□ 1
CHMP6-204ENST00000572778 TFAP2DQ7Z6R9 452 aa21.27■■□□□ 1
CHMP6-204ENST00000572778 CACUL1Q86Y37 369 aa21.27■■□□□ 1
CHMP6-204ENST00000572778 VSTM4Q8IW00 320 aa21.27■■□□□ 1
CHMP6-204ENST00000572778 KIAA2013Q8IYS2 634 aa21.27■■□□□ 1
CHMP6-204ENST00000572778 CCDC185Q8N715 623 aa21.27■■□□□ 1
CHMP6-204ENST00000572778 OR52K2Q8NGK3 314 aa21.27■■□□□ 1
CHMP6-204ENST00000572778 PRCCQ92733 491 aaPredicted RBP21.27■■□□□ 1
CHMP6-204ENST00000572778 SIPA1Q96FS4 1042 aa21.27■■□□□ 1
CHMP6-204ENST00000572778 MRGPRX3Q96LB0 322 aa21.27■■□□□ 1
CHMP6-204ENST00000572778 MUC3BQ9H195 1237 aa21.27■■□□□ 1
CHMP6-204ENST00000572778 ARRDC1-AS1Q9H2J1 176 aa21.27■■□□□ 1
CHMP6-204ENST00000572778 MYO1AQ9UBC5 1043 aa21.27■■□□□ 1
CHMP6-204ENST00000572778 MBD1Q9UIS9 605 aaPredicted RBP21.27■■□□□ 1
CHMP6-204ENST00000572778 USP18Q9UMW8 372 aa21.27■■□□□ 1
CHMP6-204ENST00000572778 TBC1D30Q9Y2I9 924 aa21.27■■□□□ 1
CHMP6-204ENST00000572778 IGLV3-10A0A075B6K4 115 aa21.26■□□□□ 0.99
CHMP6-204ENST00000572778 RHOCP08134 193 aa21.26■□□□□ 0.99
CHMP6-204ENST00000572778 SRPRAP08240 638 aaKnown RBP21.26■□□□□ 0.99
CHMP6-204ENST00000572778 PLK1P53350 603 aa21.26■□□□□ 0.99
CHMP6-204ENST00000572778 COPAP53621 1224 aa21.26■□□□□ 0.99
CHMP6-204ENST00000572778 OGDHQ02218 1023 aa21.26■□□□□ 0.99
CHMP6-204ENST00000572778 SULT2A1Q06520 285 aa21.26■□□□□ 0.99
CHMP6-204ENST00000572778 CAMK2GQ13555 558 aaPredicted RBP21.26■□□□□ 0.99
CHMP6-204ENST00000572778 TRIM14Q14142 442 aa21.26■□□□□ 0.99
CHMP6-204ENST00000572778 PMS2CLQ68D20 193 aa21.26■□□□□ 0.99
CHMP6-204ENST00000572778 OR2T3Q8NH03 318 aa21.26■□□□□ 0.99
CHMP6-204ENST00000572778 TRIM11Q96F44 468 aa21.26■□□□□ 0.99
CHMP6-204ENST00000572778 MYO19Q96H55 970 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms