RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 CHCHD4Q8N4Q1 142 aa18.72■□□□□ 0.59
CHD3-214ENST00000572579 ALG14Q96F25 216 aa18.72■□□□□ 0.59
CHD3-214ENST00000572579 RPL10LQ96L21 214 aaKnown RBP18.72■□□□□ 0.59
CHD3-214ENST00000572579 PCED1AQ9H1Q7 454 aa18.72■□□□□ 0.59
CHD3-214ENST00000572579 PABPC3Q9H361 631 aaKnown RBP18.72■□□□□ 0.59
CHD3-214ENST00000572579 DMXL2Q8TDJ6 3036 aa18.72■□□□□ 0.59
CHD3-214ENST00000572579 SYNJ2BP-COX16A0A087WUM0 186 aa18.71■□□□□ 0.59
CHD3-214ENST00000572579 FAM170AA1A519 330 aa18.71■□□□□ 0.59
CHD3-214ENST00000572579 KCNK3O14649 394 aa18.71■□□□□ 0.59
CHD3-214ENST00000572579 MID1O15344 667 aa18.71■□□□□ 0.59
CHD3-214ENST00000572579 METAP1P53582 386 aa18.71■□□□□ 0.59
CHD3-214ENST00000572579 CDH18Q13634 790 aa18.71■□□□□ 0.59
CHD3-214ENST00000572579 MAN2A1Q16706 1144 aa18.71■□□□□ 0.59
CHD3-214ENST00000572579 VWA3BQ502W6 1294 aa18.71■□□□□ 0.59
CHD3-214ENST00000572579 ZNF776Q68DI1 518 aaPredicted RBP18.71■□□□□ 0.59
CHD3-214ENST00000572579 KDM1BQ8NB78 822 aa18.71■□□□□ 0.59
CHD3-214ENST00000572579 PTPRN2Q92932 1015 aa18.71■□□□□ 0.59
CHD3-214ENST00000572579 FAM81BQ96LP2 452 aa18.71■□□□□ 0.59
CHD3-214ENST00000572579 ZDHHC5Q9C0B5 715 aa18.71■□□□□ 0.59
CHD3-214ENST00000572579 BTBD1Q9H0C5 482 aa18.71■□□□□ 0.59
CHD3-214ENST00000572579 NEUROG2Q9H2A3 272 aa18.71■□□□□ 0.59
CHD3-214ENST00000572579 NDST4Q9H3R1 872 aa18.71■□□□□ 0.59
CHD3-214ENST00000572579 GAREM1Q9H706 876 aa18.71■□□□□ 0.59
CHD3-214ENST00000572579 FBRSQ9HAH7 460 aa18.71■□□□□ 0.59
CHD3-214ENST00000572579 TM9SF3Q9HD45 589 aa18.71■□□□□ 0.59
CHD3-214ENST00000572579 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.71■□□□□ 0.59
CHD3-214ENST00000572579 ASNSD1Q9NWL6 643 aa18.71■□□□□ 0.59
CHD3-214ENST00000572579 COX16Q9P0S2 106 aa18.71■□□□□ 0.59
CHD3-214ENST00000572579 KIAA1522Q9P206 1035 aaPredicted RBP18.71■□□□□ 0.59
CHD3-214ENST00000572579 CHD6Q8TD26 2715 aa18.71■□□□□ 0.59
CHD3-214ENST00000572579 H0Y626 953 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 WNT9AO14904 365 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 APOEP02649 317 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 DNTTP04053 509 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 ASLP04424 464 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 GLI1P08151 1106 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 PDGFRAP16234 1089 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 GGCXP38435 758 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 GALCP54803 685 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 CDK17Q00537 523 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 ECT2LQ008S8 904 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 CENPCQ03188 943 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 KCNJ12Q14500 433 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 TRIP6Q15654 476 aaKnown RBP18.7■□□□□ 0.58
CHD3-214ENST00000572579 OR6B2Q6IFH4 312 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 C11orf57Q6ZUT1 292 aaPredicted RBP18.7■□□□□ 0.58
CHD3-214ENST00000572579 SLCO6A1Q86UG4 719 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 MMAAQ8IVH4 418 aaKnown RBP18.7■□□□□ 0.58
CHD3-214ENST00000572579 NAXDQ8IW45 347 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 CCAR2Q8N163 923 aaKnown RBP18.7■□□□□ 0.58
CHD3-214ENST00000572579 AADATQ8N5Z0 425 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 KDF1Q8NAX2 398 aaPredicted RBP18.7■□□□□ 0.58
CHD3-214ENST00000572579 FRS2Q8WU20 508 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 SNX19Q92543 992 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 TUBGCP2Q9BSJ2 902 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 TRIM62Q9BVG3 475 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 NAA15Q9BXJ9 866 aaKnown RBP18.7■□□□□ 0.58
CHD3-214ENST00000572579 SAMSN1Q9NSI8 373 aaKnown RBP18.7■□□□□ 0.58
CHD3-214ENST00000572579 DDIT4Q9NX09 232 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 PCOLCE2Q9UKZ9 415 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 OR51B4Q9Y5P0 310 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 SNX11Q9Y5W9 270 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 ITIH6Q6UXX5 1313 aa18.7■□□□□ 0.58
CHD3-214ENST00000572579 A0A1W2PP55 124 aa18.69■□□□□ 0.58
CHD3-214ENST00000572579 FAM221BA6H8Z2 402 aa18.69■□□□□ 0.58
CHD3-214ENST00000572579 HSF2BPO75031 334 aa18.69■□□□□ 0.58
CHD3-214ENST00000572579 FSBPO95073 299 aa18.69■□□□□ 0.58
CHD3-214ENST00000572579 SRPRAP08240 638 aaKnown RBP18.69■□□□□ 0.58
CHD3-214ENST00000572579 PLK1P53350 603 aa18.69■□□□□ 0.58
CHD3-214ENST00000572579 SLC6A3Q01959 620 aa18.69■□□□□ 0.58
CHD3-214ENST00000572579 PTK2Q05397 1052 aa18.69■□□□□ 0.58
CHD3-214ENST00000572579 AUHQ13825 339 aaKnown RBP18.69■□□□□ 0.58
CHD3-214ENST00000572579 DRAP1Q14919 205 aaPredicted RBP18.69■□□□□ 0.58
CHD3-214ENST00000572579 CST6Q15828 149 aa18.69■□□□□ 0.58
CHD3-214ENST00000572579 EFHC1Q5JVL4 640 aa18.69■□□□□ 0.58
CHD3-214ENST00000572579 RAB44Q7Z6P3 723 aaPredicted RBP18.69■□□□□ 0.58
CHD3-214ENST00000572579 ZNF683Q8IZ20 524 aa18.69■□□□□ 0.58
CHD3-214ENST00000572579 STK40Q8N2I9 435 aa18.69■□□□□ 0.58
CHD3-214ENST00000572579 PNPLA1Q8N8W4 532 aa18.69■□□□□ 0.58
CHD3-214ENST00000572579 ZNF557Q8N988 423 aaPredicted RBP18.69■□□□□ 0.58
CHD3-214ENST00000572579 FAM204AQ9H8W3 233 aa18.69■□□□□ 0.58
CHD3-214ENST00000572579 SGK2Q9HBY8 427 aa18.69■□□□□ 0.58
CHD3-214ENST00000572579 OSGEPQ9NPF4 335 aa18.69■□□□□ 0.58
CHD3-214ENST00000572579 FBXL12Q9NXK8 326 aa18.69■□□□□ 0.58
CHD3-214ENST00000572579 SNX10Q9Y5X0 201 aa18.69■□□□□ 0.58
CHD3-214ENST00000572579 FHOD1Q9Y613 1164 aa18.69■□□□□ 0.58
CHD3-214ENST00000572579 HS3ST4Q9Y661 456 aa18.69■□□□□ 0.58
CHD3-214ENST00000572579 LAMA5O15230 3695 aa18.69■□□□□ 0.58
CHD3-214ENST00000572579 TARSL2A2RTX5 802 aaKnown RBP18.68■□□□□ 0.58
CHD3-214ENST00000572579 F5H5T6 163 aa18.68■□□□□ 0.58
CHD3-214ENST00000572579 ADCY5O95622 1261 aa18.68■□□□□ 0.58
CHD3-214ENST00000572579 CAPNS1P04632 268 aa18.68■□□□□ 0.58
CHD3-214ENST00000572579 CD27P26842 260 aa18.68■□□□□ 0.58
CHD3-214ENST00000572579 ERCC5P28715 1186 aaPredicted RBP18.68■□□□□ 0.58
CHD3-214ENST00000572579 CCR1P32246 355 aa18.68■□□□□ 0.58
CHD3-214ENST00000572579 ST8SIA6P61647 398 aa18.68■□□□□ 0.58
CHD3-214ENST00000572579 KLHDC7AQ5VTJ3 777 aa18.68■□□□□ 0.58
CHD3-214ENST00000572579 KIAA0895LQ68EN5 471 aa18.68■□□□□ 0.58
CHD3-214ENST00000572579 TRNP1Q6NT89 227 aa18.68■□□□□ 0.58
CHD3-214ENST00000572579 NCEH1Q6PIU2 408 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms