RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 DENND4AQ7Z401 1863 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 A0A1B0GVM2 712 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 TCAF2A6NFQ2 919 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 H7C0C1 242 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 GFRA2O00451 464 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 LIASO43766 372 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 CLDN11O75508 207 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 CYBBP04839 570 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 SP100P23497 879 aaPredicted RBP15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 CHRNA3P32297 505 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 ATP5OP48047 213 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 IFNAR2P48551 515 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 NR2C2P49116 596 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 MAPKAPK2P49137 400 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 FNTAP49354 379 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 CDH4P55283 916 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 MPPE1Q53F39 396 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 TANGO2Q6ICL3 276 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 TPGS1Q6ZTW0 290 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 BZW1Q7L1Q6 419 aaKnown RBP15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 CHST9Q7L1S5 443 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 OTOP3Q7RTS5 596 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 CCDC33Q8N5R6 958 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 LZTR1Q8N653 840 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 KIAA1958Q8N8K9 716 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 NOA1Q8NC60 698 aaKnown RBP15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 NETO2Q8NC67 525 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 ST13P5Q8NFI4 369 aaPredicted RBP15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 HLA-CQ95604 372 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 OTUB2Q96DC9 234 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 TMA16Q96EY4 203 aaKnown RBP15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 LRRC3BQ96PB8 259 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 LRRC19Q9H756 370 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 ZFP14Q9HCL3 533 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 DNPEPQ9ULA0 475 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 DFFAO00273 331 aa15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 MBTPS2O43462 519 aa15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 LAMP2P13473 410 aa15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 COILP38432 576 aaPredicted RBP15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 SLC10A2Q12908 348 aaPredicted RBP15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 BYSLQ13895 437 aaKnown RBP15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 TEX35Q5T0J7 233 aa15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 TTC27Q6P3X3 843 aa15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 ZC3H18Q86VM9 953 aaKnown RBP15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 CDKL3Q8IVW4 592 aaPredicted RBP15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 MAFAQ8NHW3 353 aaPredicted RBP15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 SLC35B2Q8TB61 432 aa15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 DDI1Q8WTU0 396 aa15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 OSCP1Q8WVF1 389 aa15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 BHMTQ93088 406 aa15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 NKD2Q969F2 451 aaPredicted RBP15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 E2F7Q96AV8 911 aa15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 CCDC114Q96M63 670 aa15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 RUNDC3BQ96NL0 473 aa15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 RETREG1Q9H6L5 497 aa15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 NDFIP2Q9NV92 336 aa15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 DUS2Q9NX74 493 aaKnown RBP15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 RAD54BQ9Y620 910 aa15.84■□□□□ 0.13
HERPUD1-219ENST00000570273 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 PPP1R12AO14974 1030 aaPredicted RBP15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 RAMP2O60895 175 aa15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 RBP3P10745 1247 aa15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 MX2P20592 715 aa15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 OR1E1P30953 314 aa15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 KCNJ1P48048 391 aa15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 ZNF177Q13360 481 aaPredicted RBP15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 PDK1Q15118 436 aa15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 DARS2Q6PI48 645 aaKnown RBP15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 CCDC137Q6PK04 289 aaKnown RBP15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 MTSS1LQ765P7 747 aa15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 TP53INP2Q8IXH6 220 aa15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 CCDC105Q8IYK2 499 aa15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 CARNMT1Q8N4J0 409 aa15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 MMGT1Q8N4V1 131 aa15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 OLFM3Q96PB7 478 aa15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 QKIQ96PU8 341 aaKnown RBP eCLIP15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 KXD1Q9BQD3 176 aa15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 KLC2Q9H0B6 622 aa15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 LINC00597Q9H2U6 94 aa15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 THG1LQ9NWX6 298 aaKnown RBP15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 ZNF212Q9UDV6 495 aa15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 ZNF148Q9UQR1 794 aa15.83■□□□□ 0.12
HERPUD1-219ENST00000570273 BRWD1Q9NSI6 2320 aa15.82■□□□□ 0.12
HERPUD1-219ENST00000570273 LUC7L3O95232 432 aaKnown RBP15.82■□□□□ 0.12
HERPUD1-219ENST00000570273 RHOCP08134 193 aa15.82■□□□□ 0.12
HERPUD1-219ENST00000570273 NDST2P52849 883 aa15.82■□□□□ 0.12
HERPUD1-219ENST00000570273 GALNT2Q10471 571 aa15.82■□□□□ 0.12
HERPUD1-219ENST00000570273 CDH18Q13634 790 aa15.82■□□□□ 0.12
HERPUD1-219ENST00000570273 OASLQ15646 514 aaKnown RBP15.82■□□□□ 0.12
HERPUD1-219ENST00000570273 C6orf118Q5T5N4 469 aa15.82■□□□□ 0.12
HERPUD1-219ENST00000570273 C8orf74Q6P047 294 aa15.82■□□□□ 0.12
HERPUD1-219ENST00000570273 DRICH1Q6PGQ1 229 aaPredicted RBP15.82■□□□□ 0.12
HERPUD1-219ENST00000570273 PARM1Q6UWI2 310 aa15.82■□□□□ 0.12
HERPUD1-219ENST00000570273 VITQ6UXI7 678 aa15.82■□□□□ 0.12
HERPUD1-219ENST00000570273 B4GALNT4Q76KP1 1039 aa15.82■□□□□ 0.12
HERPUD1-219ENST00000570273 MFN1Q8IWA4 741 aa15.82■□□□□ 0.12
HERPUD1-219ENST00000570273 CCDC117Q8IWD4 279 aaPredicted RBP15.82■□□□□ 0.12
HERPUD1-219ENST00000570273 ARHGAP12Q8IWW6 846 aa15.82■□□□□ 0.12
HERPUD1-219ENST00000570273 YAF2Q8IY57 180 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms