RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 C2CD4BA6NLJ0 364 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 PRR5-ARHGAP8B1AHC4 643 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 MAP3K13O43283 966 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 ENDOD1O94919 500 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 CAVIN2O95810 425 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 CALB1P05937 261 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 CCDC172P0C7W6 258 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 C7P10643 843 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 RDXP35241 583 aaKnown RBP13.44□□□□□ -0.26
CNOT1-220ENST00000569916 PTGER3P43115 390 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 CTSOP43234 321 aaPredicted RBP13.44□□□□□ -0.26
CNOT1-220ENST00000569916 ID4P47928 161 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 TPM4P67936 248 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 ARHGAP8P85298 464 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 FANCCQ00597 558 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 SLC12A1Q13621 1099 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 RAB6CQ53S08 254 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 SPDYCQ5MJ68 293 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 CYP2U1Q7Z449 544 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 METTL3Q86U44 580 aaKnown RBP13.44□□□□□ -0.26
CNOT1-220ENST00000569916 FAM131BQ86XD5 332 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 TMPRSS6Q8IU80 811 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 TMEFF1Q8IYR6 380 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 ZNF683Q8IZ20 524 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 OR52K2Q8NGK3 314 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 OR2T3Q8NH03 318 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 RXFP2Q8WXD0 754 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 RAB6CQ9H0N0 254 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 PRDM16Q9HAZ2 1276 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 VPS45Q9NRW7 570 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 TMEM51Q9NW97 253 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 DLL3Q9NYJ7 618 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 PAXBP1Q9Y5B6 917 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 SNX10Q9Y5X0 201 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 DCHS1Q96JQ0 3298 aa13.44□□□□□ -0.26
CNOT1-220ENST00000569916 ITIH6Q6UXX5 1313 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 AP5Z1O43299 807 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 FOXD2O60548 495 aaPredicted RBP13.43□□□□□ -0.26
CNOT1-220ENST00000569916 MOCS3O95396 460 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 PDGFRAP16234 1089 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 MZF1P28698 734 aaPredicted RBP13.43□□□□□ -0.26
CNOT1-220ENST00000569916 SDC4P31431 198 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 PBX1P40424 430 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 PTPN9P43378 593 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 PLK1P53350 603 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 ATP11AP98196 1134 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 RPL6Q02878 288 aaKnown RBP13.43□□□□□ -0.26
CNOT1-220ENST00000569916 C1QBPQ07021 282 aaKnown RBP13.43□□□□□ -0.26
CNOT1-220ENST00000569916 ASIC2Q16515 512 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 CDO1Q16878 200 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 RSPO4Q2I0M5 234 aaPredicted RBP13.43□□□□□ -0.26
CNOT1-220ENST00000569916 C15orf59Q2T9L4 293 aaPredicted RBP13.43□□□□□ -0.26
CNOT1-220ENST00000569916 CCDC14Q49A88 953 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 ALFQ53S48 1182 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 FIGNQ5HY92 759 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 ARTNQ5T4W7 220 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 TCEAL6Q6IPX3 200 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 SLC36A4Q6YBV0 504 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 ARMCX6Q7L4S7 300 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 CACUL1Q86Y37 369 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 KDM1BQ8NB78 822 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 C3orf20Q8ND61 904 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 PRCCQ92733 491 aaPredicted RBP13.43□□□□□ -0.26
CNOT1-220ENST00000569916 TCEAL3Q969E4 200 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 SIPA1Q96FS4 1042 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 SELENOOQ9BVL4 669 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 PRSS16Q9NQE7 514 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 ITM2CQ9NQX7 267 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 RXFP3Q9NSD7 469 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 AIPL1Q9NZN9 384 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 ERVW-1Q9UQF0 538 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 CEP250Q9BV73 2442 aa13.43□□□□□ -0.26
CNOT1-220ENST00000569916 CHD5Q8TDI0 1954 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 IGLV3-10A0A075B6K4 115 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 GOLGA6L19H0YKK7 550 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 GDF9O60383 454 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 CLDN11O75508 207 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 CNTN5O94779 1100 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 IGLV3-19P01714 112 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 SRPRAP08240 638 aaKnown RBP13.42□□□□□ -0.26
CNOT1-220ENST00000569916 KRT3P12035 628 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 RFC1P35251 1148 aaPredicted RBP13.42□□□□□ -0.26
CNOT1-220ENST00000569916 PRKCIP41743 596 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 NUMBP49757 651 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 TPMTP51580 245 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 CDH4P55283 916 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 OXCT1P55809 520 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 ST8SIA6P61647 398 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 ECT2LQ008S8 904 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 ARID5BQ14865 1188 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 HNRNPA1L2Q32P51 320 aaKnown RBP13.42□□□□□ -0.26
CNOT1-220ENST00000569916 SH3PXD2AQ5TCZ1 1133 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 SFMBT2Q5VUG0 894 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 LYSMD4Q5XG99 296 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 ACAD10Q6JQN1 1059 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 STRADAQ7RTN6 431 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 DEFB119Q8N690 84 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 C12orf50Q8NA57 414 aaPredicted RBP13.42□□□□□ -0.26
CNOT1-220ENST00000569916 NETO1Q8TDF5 533 aa13.42□□□□□ -0.26
CNOT1-220ENST00000569916 ALG14Q96F25 216 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms