RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 LINC00597Q9H2U6 94 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 SEMA4AQ9H3S1 761 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 FAM204AQ9H8W3 233 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 HPS4Q9NQG7 708 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 CNGB3Q9NQW8 809 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 SPHK2Q9NRA0 654 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 LATS2Q9NRM7 1088 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 FAM207AQ9NSI2 230 aaPredicted RBP5.03□□□□□ -1.6
CNOT1-219ENST00000569882 SAMSN1Q9NSI8 373 aaKnown RBP5.03□□□□□ -1.6
CNOT1-219ENST00000569882 TMEM30AQ9NV96 361 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.03□□□□□ -1.6
CNOT1-219ENST00000569882 ZSCAN32Q9NX65 697 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 CLIC5Q9NZA1 410 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 COX16Q9P0S2 106 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 SLC12A6Q9UHW9 1150 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.03□□□□□ -1.6
CNOT1-219ENST00000569882 PCDHGA2Q9Y5H1 932 aa5.03□□□□□ -1.6
CNOT1-219ENST00000569882 SPTBN5Q9NRC6 3674 aaKnown RBP5.02□□□□□ -1.61
CNOT1-219ENST00000569882 MYO18AQ92614 2054 aaKnown RBP5.02□□□□□ -1.61
CNOT1-219ENST00000569882 ANKRD62A6NC57 917 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 CHURC1-FNTBB4DL54 471 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 ARNTLO00327 626 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 TRDMT1O14717 391 aaKnown RBP5.02□□□□□ -1.61
CNOT1-219ENST00000569882 KAT7O95251 611 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 KLF8O95600 359 aaPredicted RBP5.02□□□□□ -1.61
CNOT1-219ENST00000569882 APBB3O95704 486 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 OLFM2O95897 454 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 CALCAP01258 141 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 LTFP02788 710 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 TPM3P06753 285 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 CHRNB1P11230 501 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 TYRP14679 529 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 ABCB4P21439 1286 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 PON1P27169 355 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 GRIA2P42262 883 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 FNTBP49356 437 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 DGKEP52429 567 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 TBX4P57082 545 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 ZNF445P59923 1031 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 RNASE9P60153 205 aaKnown RBP5.02□□□□□ -1.61
CNOT1-219ENST00000569882 POLR2FP61218 127 aaKnown RBP5.02□□□□□ -1.61
CNOT1-219ENST00000569882 CDK17Q00537 523 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 SATB1Q01826 763 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 CDH18Q13634 790 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 SIM2Q14190 667 aaPredicted RBP5.02□□□□□ -1.61
CNOT1-219ENST00000569882 DMC1Q14565 340 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 DRAP1Q14919 205 aaPredicted RBP5.02□□□□□ -1.61
CNOT1-219ENST00000569882 ELF2Q15723 593 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 LPAL2Q16609 132 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 ZNF528Q3MIS6 628 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 ANO6Q4KMQ2 910 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 TMEM196Q5HYL7 178 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 EOGTQ5NDL2 527 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 TAF3Q5VWG9 929 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 SNX30Q5VWJ9 437 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 NUGGCQ68CJ6 796 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 OR6B2Q6IFH4 312 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 ANO7Q6IWH7 933 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 FSTL4Q6MZW2 842 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 ALKBH2Q6NS38 261 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 KLHDC10Q6PID8 442 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 UNC45BQ8IWX7 931 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 CHPFQ8IZ52 775 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 ZNF513Q8N8E2 541 aaPredicted RBP5.02□□□□□ -1.61
CNOT1-219ENST00000569882 KIAA1958Q8N8K9 716 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 TMEM35BQ8NCS4 154 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 ENOX1Q8TC92 643 aaKnown RBP5.02□□□□□ -1.61
CNOT1-219ENST00000569882 ZNF606Q8WXB4 792 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 KCTD13Q8WZ19 329 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 IRGQQ8WZA9 623 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 TFAP2BQ92481 460 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 NDRG1Q92597 394 aaKnown RBP5.02□□□□□ -1.61
CNOT1-219ENST00000569882 CLDN23Q96B33 292 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 PPP1R13BQ96KQ4 1090 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 HSFY1Q96LI6 401 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 SERPINB11Q96P15 392 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 CIPCQ9C0C6 399 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 NMUR1Q9HB89 426 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 NLRC4Q9NPP4 1024 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 FANCLQ9NW38 375 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 PLK2Q9NYY3 685 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 TJP2Q9UDY2 1190 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 SFMBT1Q9UHJ3 866 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 RNF112Q9ULX5 631 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 STAP1Q9ULZ2 295 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 USP18Q9UMW8 372 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 SOX13Q9UN79 622 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 SMG5Q9UPR3 1016 aaKnown RBP5.02□□□□□ -1.61
CNOT1-219ENST00000569882 RAXQ9Y2V3 346 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 HBS1LQ9Y450 684 aaKnown RBP5.02□□□□□ -1.61
CNOT1-219ENST00000569882 PAXBP1Q9Y5B6 917 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 SPAG17Q6Q759 2223 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 CACNA1HO95180 2353 aa5.02□□□□□ -1.61
CNOT1-219ENST00000569882 PTPRZ1P23471 2315 aaPredicted RBP5.01□□□□□ -1.61
CNOT1-219ENST00000569882 COL4A2P08572 1712 aa5.01□□□□□ -1.61
CNOT1-219ENST00000569882 TCRBV21S2A2A0A5A6 115 aa5.01□□□□□ -1.61
CNOT1-219ENST00000569882 FAM170AA1A519 330 aa5.01□□□□□ -1.61
CNOT1-219ENST00000569882 SYCE3A1L190 88 aa5.01□□□□□ -1.61
CNOT1-219ENST00000569882 FAM92AA1XBS5 289 aa5.01□□□□□ -1.61
CNOT1-219ENST00000569882 OTOL1A6NHN0 477 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms