RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 AGGF1Q8N302 714 aaeCLIP5.88□□□□□ -1.47
CDH13-213ENST00000569454 DEFB123Q8N688 67 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 COLGALT1Q8NBJ5 622 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 CCNYQ8ND76 341 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 TRPV1Q8NER1 839 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 GABPB2Q8TAK5 448 aaPredicted RBP5.88□□□□□ -1.47
CDH13-213ENST00000569454 TCP10LQ8TDR4 215 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 SREK1Q8WXA9 508 aaKnown RBP5.88□□□□□ -1.47
CDH13-213ENST00000569454 TRIB2Q92519 343 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 MYLPFQ96A32 169 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 KLHL29Q96CT2 875 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 C7orf26Q96N11 449 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 HAPLN3Q96S86 360 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 SRPK1Q96SB4 655 aaKnown RBP5.88□□□□□ -1.47
CDH13-213ENST00000569454 TACO1Q9BSH4 297 aaKnown RBP5.88□□□□□ -1.47
CDH13-213ENST00000569454 TSEN34Q9BSV6 310 aaKnown RBP5.88□□□□□ -1.47
CDH13-213ENST00000569454 COLEC11Q9BWP8 271 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 TSSK1BQ9BXA7 367 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 FTHL17Q9BXU8 183 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 MFRPQ9BY79 579 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 OXCT2Q9BYC2 517 aaPredicted RBP5.88□□□□□ -1.47
CDH13-213ENST00000569454 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.88□□□□□ -1.47
CDH13-213ENST00000569454 RAB6CQ9H0N0 254 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 GBA3Q9H227 469 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 SMOC2Q9H3U7 446 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 PRDM12Q9H4Q4 367 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 STN1Q9H668 368 aaKnown RBP5.88□□□□□ -1.47
CDH13-213ENST00000569454 WDCPQ9H6R7 721 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 CATSPERBQ9H7T0 1116 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 MANSC1Q9H8J5 431 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 C10orf88Q9H8K7 445 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 LRRC40Q9H9A6 602 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 KIF9Q9HAQ2 790 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 WDR6Q9NNW5 1121 aaKnown RBP5.88□□□□□ -1.47
CDH13-213ENST00000569454 SLC40A1Q9NP59 571 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 MLXIPLQ9NP71 852 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 SAR1AQ9NR31 198 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 ABCC13Q9NSE7 274 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 KLC4Q9NSK0 619 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 ABCF3Q9NUQ8 709 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.88□□□□□ -1.47
CDH13-213ENST00000569454 MOCS1Q9NZB8 636 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 BFARQ9NZS9 450 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 KLHL8Q9P2G9 620 aaPredicted RBP5.88□□□□□ -1.47
CDH13-213ENST00000569454 KANSL3Q9P2N6 904 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 GRID1Q9ULK0 1009 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 MTO1Q9Y2Z2 717 aaKnown RBP5.88□□□□□ -1.47
CDH13-213ENST00000569454 NAV2Q8IVL1 2488 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 TSC2P49815 1807 aa5.88□□□□□ -1.47
CDH13-213ENST00000569454 ASH1LQ9NR48 2969 aaKnown RBP5.87□□□□□ -1.47
CDH13-213ENST00000569454 A0A1W2PPM1 405 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 MYBPHLA2RUH7 354 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 CASTOR2A6NHX0 329 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 GOLGA8CPA6NN73 597 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 CLDN5O00501 218 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 TRAFD1O14545 582 aaPredicted RBP5.87□□□□□ -1.47
CDH13-213ENST00000569454 NRP1O14786 923 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 SYN3O14994 580 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 IRAK2O43187 625 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 TIMM44O43615 452 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 CREB3O43889 395 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 MGRN1O60291 552 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 DNAJC6O75061 913 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 ATP2C2O75185 946 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 H2AFYO75367 372 aaKnown RBP5.87□□□□□ -1.47
CDH13-213ENST00000569454 USP1O94782 785 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 UBOX5O94941 541 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 PGK1P00558 417 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 IGLV3-25P01717 112 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 USP17L7P0C7H9 530 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 DNAJB1P25685 340 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 EPHB2P29323 1055 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 CD52P31358 61 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 CCR1P32246 355 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 CRHR1P34998 444 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 GP5P40197 560 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 NPY2RP49146 381 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 CDK7P50613 346 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 ATXN1P54253 815 aaKnown RBP5.87□□□□□ -1.47
CDH13-213ENST00000569454 CSE1LP55060 971 aaKnown RBP5.87□□□□□ -1.47
CDH13-213ENST00000569454 NCALDP61601 193 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 YWHAHQ04917 246 aaPredicted RBP5.87□□□□□ -1.47
CDH13-213ENST00000569454 NIPAL4Q0D2K0 466 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 WASHC5Q12768 1159 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 SMARCB1Q12824 385 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 NOGQ13253 232 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 LPIN1Q14693 890 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 CRYMQ14894 314 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 KCNA10Q16322 511 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 ANO4Q32M45 955 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 TIGD5Q53EQ6 642 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 FAXCQ5TGI0 409 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 SYPL2Q5VXT5 272 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 BSPRYQ5W0U4 402 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 CCSAPQ6IQ19 270 aaPredicted RBP5.87□□□□□ -1.47
CDH13-213ENST00000569454 TIGD7Q6NT04 549 aaPredicted RBP5.87□□□□□ -1.47
CDH13-213ENST00000569454 CGB2Q6NT52 195 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 CASC4Q6P4E1 433 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 SH2D5Q6ZV89 423 aa5.87□□□□□ -1.47
CDH13-213ENST00000569454 OTOAQ7RTW8 1153 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms