RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 SEMA5AQ13591 1074 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 TAF1CQ15572 869 aaPredicted RBP8.98□□□□□ -0.97
LINC00558-201ENST00000569422 CCDC6Q16204 474 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 CTC1Q2NKJ3 1217 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 PLEKHG6Q3KR16 790 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 OTUD1Q5VV17 481 aaPredicted RBP8.98□□□□□ -0.97
LINC00558-201ENST00000569422 ATG16L1Q676U5 607 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 KRT77Q7Z794 578 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 CRLF3Q8IUI8 442 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 C3orf58Q8NDZ4 430 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 MCUQ8NE86 351 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 SVIPQ8NHG7 77 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 CDKL2Q92772 493 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 UPF1Q92900 1129 aaKnown RBP eCLIP8.98□□□□□ -0.97
LINC00558-201ENST00000569422 WNT8BQ93098 351 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 AGAP2Q99490 1192 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 FERMT1Q9BQL6 677 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 UNKQ9C0B0 810 aaKnown RBP8.98□□□□□ -0.97
LINC00558-201ENST00000569422 CAB39LQ9H9S4 337 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 SPC25Q9HBM1 224 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 ST3GAL5Q9UNP4 418 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 MTO1Q9Y2Z2 717 aaKnown RBP8.98□□□□□ -0.97
LINC00558-201ENST00000569422 MBLAC1A4D2B0 266 aaPredicted RBP8.98□□□□□ -0.97
LINC00558-201ENST00000569422 FAM159BA6NKW6 160 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 B2RBV5 119 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 DGKIO75912 1065 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 UPP2O95045 317 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 ATXN8OSP0DMR3 200 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 ELF1P32519 619 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 HUNKP57058 714 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 MAP2K5Q13163 448 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 UBAP2LQ14157 1087 aaKnown RBP8.98□□□□□ -0.97
LINC00558-201ENST00000569422 CRYMQ14894 314 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 DLG2Q15700 870 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 KHDC1Q4VXA5 237 aaKnown RBP8.98□□□□□ -0.97
LINC00558-201ENST00000569422 CERCAMQ5T4B2 595 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 SPNS2Q8IVW8 549 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 CHCHD4Q8N4Q1 142 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 KIAA1958Q8N8K9 716 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 FBXO27Q8NI29 283 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 CLPTM1LQ96KA5 538 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 HNRNPABQ99729 332 aaKnown RBP8.98□□□□□ -0.97
LINC00558-201ENST00000569422 SYT15Q9BQS2 421 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 YIPF2Q9BWQ6 316 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 PNPLA8Q9NP80 782 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 GDAP2Q9NXN4 497 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 CDY2AQ9Y6F7 541 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 USP3Q9Y6I4 520 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.98□□□□□ -0.97
LINC00558-201ENST00000569422 LRRC37A2A6NM11 1700 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 MEI4A8MW99 385 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 M0QZ92 97 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 ZBTB24O43167 697 aaPredicted RBP8.98□□□□□ -0.97
LINC00558-201ENST00000569422 CCDC22O60826 627 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 B3GAT3O94766 335 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 ALDOAP04075 364 aaKnown RBP8.98□□□□□ -0.97
LINC00558-201ENST00000569422 ZNF865P0CJ78 1059 aaPredicted RBP8.98□□□□□ -0.97
LINC00558-201ENST00000569422 TPSB2P20231 275 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 ADRA1BP35368 520 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 BRCC3P46736 316 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 CRYBB1P53674 252 aaPredicted RBP8.98□□□□□ -0.97
LINC00558-201ENST00000569422 PDK1Q15118 436 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 TAF11Q15544 211 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 TPSAB1Q15661 275 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 FSCN1Q16658 493 aaKnown RBP8.98□□□□□ -0.97
LINC00558-201ENST00000569422 HSP90AA5PQ58FG0 334 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 PACS1Q6VY07 963 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 CHSY1Q86X52 802 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 MAGEC3Q8TD91 643 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 MFSD3Q96ES6 412 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 SMOQ99835 787 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 FRMD8Q9BZ67 464 aaPredicted RBP8.98□□□□□ -0.97
LINC00558-201ENST00000569422 TKTL2Q9H0I9 626 aa8.98□□□□□ -0.97
LINC00558-201ENST00000569422 CPSF2Q9P2I0 782 aaKnown RBP8.98□□□□□ -0.97
LINC00558-201ENST00000569422 TMA7Q9Y2S6 64 aaKnown RBP8.98□□□□□ -0.97
LINC00558-201ENST00000569422 DFFAO00273 331 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 JCHAINP01591 159 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 FYNP06241 537 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 THP07101 528 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 HOXD10P28358 340 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 CPT1AP50416 773 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 CDC42EP1Q00587 391 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 PDE1CQ14123 709 aaPredicted RBP8.97□□□□□ -0.97
LINC00558-201ENST00000569422 KPNB1Q14974 876 aaKnown RBP8.97□□□□□ -0.97
LINC00558-201ENST00000569422 VWA5B1Q5TIE3 1220 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 BZW1Q7L1Q6 419 aaKnown RBP8.97□□□□□ -0.97
LINC00558-201ENST00000569422 TREML1Q86YW5 311 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 NPWQ8N729 165 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 POU5F2Q8N7G0 328 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 ARNTL2Q8WYA1 636 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 INPP5DQ92835 1189 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 LRRC39Q96DD0 335 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 FCRL3Q96P31 734 aaPredicted RBP8.97□□□□□ -0.97
LINC00558-201ENST00000569422 OLFM3Q96PB7 478 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 NPY6RQ99463 290 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 BTBD10Q9BSF8 475 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 WDCPQ9H6R7 721 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 TAS2R1Q9NYW7 299 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 ZNF180Q9UJW8 692 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 DNAJC16Q9Y2G8 782 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms