RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 IL1BP01584 269 aa9□□□□□ -0.97
SMG1-216ENST00000569122 C4BPAP04003 597 aaKnown RBP9□□□□□ -0.97
SMG1-216ENST00000569122 ITGA2BP08514 1039 aa9□□□□□ -0.97
SMG1-216ENST00000569122 THEGLP0DJG4 465 aa9□□□□□ -0.97
SMG1-216ENST00000569122 CLDN10P78369 228 aa9□□□□□ -0.97
SMG1-216ENST00000569122 INCA1Q0VD86 236 aa9□□□□□ -0.97
SMG1-216ENST00000569122 CLN3Q13286 438 aa9□□□□□ -0.97
SMG1-216ENST00000569122 ELAVL3Q14576 367 aaKnown RBP9□□□□□ -0.97
SMG1-216ENST00000569122 TRIM69Q86WT6 500 aa9□□□□□ -0.97
SMG1-216ENST00000569122 MFN1Q8IWA4 741 aa9□□□□□ -0.97
SMG1-216ENST00000569122 C12orf56Q8IXR9 622 aa9□□□□□ -0.97
SMG1-216ENST00000569122 CCDC150Q8NCX0 1101 aa9□□□□□ -0.97
SMG1-216ENST00000569122 FIBINQ8TAL6 211 aa9□□□□□ -0.97
SMG1-216ENST00000569122 IFI44Q8TCB0 444 aa9□□□□□ -0.97
SMG1-216ENST00000569122 GLMNQ92990 594 aa9□□□□□ -0.97
SMG1-216ENST00000569122 APOLD1Q96LR9 279 aa9□□□□□ -0.97
SMG1-216ENST00000569122 FGFBP2Q9BYJ0 223 aa9□□□□□ -0.97
SMG1-216ENST00000569122 SDCBP2Q9H190 292 aa9□□□□□ -0.97
SMG1-216ENST00000569122 TNMDQ9H2S6 317 aa9□□□□□ -0.97
SMG1-216ENST00000569122 SEPT10Q9P0V9 454 aa9□□□□□ -0.97
SMG1-216ENST00000569122 ARHGAP20Q9P2F6 1191 aa9□□□□□ -0.97
SMG1-216ENST00000569122 TFIP11Q9UBB9 837 aaKnown RBP9□□□□□ -0.97
SMG1-216ENST00000569122 CYTH4Q9UIA0 394 aa9□□□□□ -0.97
SMG1-216ENST00000569122 CEP83Q9Y592 693 aa9□□□□□ -0.97
SMG1-216ENST00000569122 UBR5O95071 2799 aaPredicted RBP9□□□□□ -0.97
SMG1-216ENST00000569122 IKBKBO14920 756 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 CLIC2O15247 247 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 FFAR2O15552 330 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 TGFB1I1O43294 461 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 TBL1XO60907 577 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 PIAS2O75928 621 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 TNFSF15O95150 251 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 ZBED1O96006 694 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 CR2P20023 1033 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 CD70P32970 193 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 CSKP41240 450 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 PSMD8P48556 350 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 RPIAP49247 311 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 HNRNPKP61978 463 aaKnown RBP eCLIP8.99□□□□□ -0.97
SMG1-216ENST00000569122 ECT2LQ008S8 904 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 EHHADHQ08426 723 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 KCNMA1Q12791 1236 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 EIF3IQ13347 325 aaKnown RBP8.99□□□□□ -0.97
SMG1-216ENST00000569122 LINC00303Q3SY05 128 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 NUGGCQ68CJ6 796 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 ZCCHC8Q6NZY4 707 aaKnown RBP8.99□□□□□ -0.97
SMG1-216ENST00000569122 NEK5Q6P3R8 708 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.99□□□□□ -0.97
SMG1-216ENST00000569122 C14orf80Q86SX3 495 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 AADATQ8N5Z0 425 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 PARD3BQ8TEW8 1205 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 AZIN2Q96A70 460 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 SPAG5Q96R06 1193 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 PPP1R9BQ96SB3 815 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.99□□□□□ -0.97
SMG1-216ENST00000569122 SLC25A18Q9H1K4 315 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 CUEDC2Q9H467 287 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 PREBQ9HCU5 417 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 WDR70Q9NW82 654 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 PCDHGA7Q9Y5G6 932 aa8.99□□□□□ -0.97
SMG1-216ENST00000569122 CCDC187A0A096LP49 1063 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 C1QTNF3-AMACRE9PGA6 284 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 H3BM21 787 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 PLRG1O43660 514 aaKnown RBP8.98□□□□□ -0.97
SMG1-216ENST00000569122 ASS1P00966 412 aaKnown RBP8.98□□□□□ -0.97
SMG1-216ENST00000569122 MYF5P13349 255 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 ITGB6P18564 788 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 MZF1P28698 734 aaPredicted RBP8.98□□□□□ -0.97
SMG1-216ENST00000569122 GJB2P29033 226 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 MAT2AP31153 395 aaKnown RBP8.98□□□□□ -0.97
SMG1-216ENST00000569122 AKT2P31751 481 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 HOXD13P35453 343 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 TLE1Q04724 770 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 SULT2A1Q06520 285 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 CDH18Q13634 790 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 ZACNQ401N2 412 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 RAB41Q5JT25 222 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 FAM26FQ5R3K3 315 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 PIK3R6Q5UE93 754 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 PM20D1Q6GTS8 502 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 EPM2AIP1Q7L775 607 aaPredicted RBP8.98□□□□□ -0.97
SMG1-216ENST00000569122 HJURPQ8NCD3 748 aaPredicted RBP8.98□□□□□ -0.97
SMG1-216ENST00000569122 EXTL1Q92935 676 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 ATXN7L3BQ96GX2 97 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 MYO19Q96H55 970 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 FAXDC2Q96IV6 333 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 HEXIM2Q96MH2 286 aaKnown RBP8.98□□□□□ -0.97
SMG1-216ENST00000569122 IPO9Q96P70 1041 aaKnown RBP8.98□□□□□ -0.97
SMG1-216ENST00000569122 FAM129BQ96TA1 746 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 ADNPQ9H2P0 1102 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 ABCC13Q9NSE7 274 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 GEMIN8Q9NWZ8 242 aaKnown RBP8.98□□□□□ -0.97
SMG1-216ENST00000569122 SALL4Q9UJQ4 1053 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 ERVW-1Q9UQF0 538 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 PCDHB11Q9Y5F2 797 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 ENTPD2Q9Y5L3 495 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 CSNK1G3Q9Y6M4 447 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 AHCTF1Q8WYP5 2266 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 ITIH6Q6UXX5 1313 aa8.98□□□□□ -0.97
SMG1-216ENST00000569122 TEX15Q9BXT5 2789 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms