RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 IGSF8Q969P0 613 aa20.95■□□□□ 0.94
CLK3-225ENST00000569063 MRGPRX3Q96LB0 322 aa20.95■□□□□ 0.94
CLK3-225ENST00000569063 LAMA1P25391 3075 aa20.95■□□□□ 0.94
CLK3-225ENST00000569063 FAM170AA1A519 330 aa20.94■□□□□ 0.94
CLK3-225ENST00000569063 GOLGA8SH3BPF8 625 aa20.94■□□□□ 0.94
CLK3-225ENST00000569063 TM4SF5O14894 197 aa20.94■□□□□ 0.94
CLK3-225ENST00000569063 ADCY5O95622 1261 aa20.94■□□□□ 0.94
CLK3-225ENST00000569063 SRPRAP08240 638 aaKnown RBP20.94■□□□□ 0.94
CLK3-225ENST00000569063 ACADMP11310 421 aa20.94■□□□□ 0.94
CLK3-225ENST00000569063 UNGP13051 313 aaPredicted RBP20.94■□□□□ 0.94
CLK3-225ENST00000569063 FLT3P36888 993 aa20.94■□□□□ 0.94
CLK3-225ENST00000569063 ST8SIA6P61647 398 aa20.94■□□□□ 0.94
CLK3-225ENST00000569063 IRX4P78413 519 aa20.94■□□□□ 0.94
CLK3-225ENST00000569063 DEUP1Q05D60 604 aa20.94■□□□□ 0.94
CLK3-225ENST00000569063 PLEKHG6Q3KR16 790 aa20.94■□□□□ 0.94
CLK3-225ENST00000569063 BNIPLQ7Z465 357 aa20.94■□□□□ 0.94
CLK3-225ENST00000569063 FOXJ1Q92949 421 aa20.94■□□□□ 0.94
CLK3-225ENST00000569063 TOE1Q96GM8 510 aaKnown RBP20.94■□□□□ 0.94
CLK3-225ENST00000569063 RPRD1AQ96P16 312 aaPredicted RBP20.94■□□□□ 0.94
CLK3-225ENST00000569063 TBCBQ99426 244 aa20.94■□□□□ 0.94
CLK3-225ENST00000569063 FUCA2Q9BTY2 467 aa20.94■□□□□ 0.94
CLK3-225ENST00000569063 EDEM2Q9BV94 578 aa20.94■□□□□ 0.94
CLK3-225ENST00000569063 TKTL2Q9H0I9 626 aa20.94■□□□□ 0.94
CLK3-225ENST00000569063 ERVW-1Q9UQF0 538 aa20.94■□□□□ 0.94
CLK3-225ENST00000569063 PAXBP1Q9Y5B6 917 aa20.94■□□□□ 0.94
CLK3-225ENST00000569063 ZNF165P49910 485 aa20.93■□□□□ 0.94
CLK3-225ENST00000569063 PLK1P53350 603 aa20.93■□□□□ 0.94
CLK3-225ENST00000569063 OXCT1P55809 520 aa20.93■□□□□ 0.94
CLK3-225ENST00000569063 ECT2LQ008S8 904 aa20.93■□□□□ 0.94
CLK3-225ENST00000569063 CENPCQ03188 943 aa20.93■□□□□ 0.94
CLK3-225ENST00000569063 ZBTB16Q05516 673 aa20.93■□□□□ 0.94
CLK3-225ENST00000569063 TRIM61Q5EBN2 209 aa20.93■□□□□ 0.94
CLK3-225ENST00000569063 ACBD5Q5T8D3 534 aaPredicted RBP20.93■□□□□ 0.94
CLK3-225ENST00000569063 IL31Q6EBC2 164 aa20.93■□□□□ 0.94
CLK3-225ENST00000569063 TRNP1Q6NT89 227 aa20.93■□□□□ 0.94
CLK3-225ENST00000569063 SLC23A3Q6PIS1 610 aa20.93■□□□□ 0.94
CLK3-225ENST00000569063 CIR1Q86X95 450 aaPredicted RBP20.93■□□□□ 0.94
CLK3-225ENST00000569063 APCDD1Q8J025 514 aa20.93■□□□□ 0.94
CLK3-225ENST00000569063 CADM4Q8NFZ8 388 aa20.93■□□□□ 0.94
CLK3-225ENST00000569063 CEP76Q8TAP6 659 aa20.93■□□□□ 0.94
CLK3-225ENST00000569063 HSPA12BQ96MM6 686 aa20.93■□□□□ 0.94
CLK3-225ENST00000569063 PCDHB18PQ96TA0 734 aa20.93■□□□□ 0.94
CLK3-225ENST00000569063 NUP58Q9BVL2 599 aa20.93■□□□□ 0.94
CLK3-225ENST00000569063 RTN4Q9NQC3 1192 aaKnown RBP20.93■□□□□ 0.94
CLK3-225ENST00000569063 ANLNQ9NQW6 1124 aa20.93■□□□□ 0.94
CLK3-225ENST00000569063 VANGL2Q9ULK5 521 aa20.93■□□□□ 0.94
CLK3-225ENST00000569063 I6L893 689 aaPredicted RBP20.92■□□□□ 0.94
CLK3-225ENST00000569063 TEX33O43247 280 aa20.92■□□□□ 0.94
CLK3-225ENST00000569063 CTSOP43234 321 aaPredicted RBP20.92■□□□□ 0.94
CLK3-225ENST00000569063 KLHL40Q2TBA0 621 aa20.92■□□□□ 0.94
CLK3-225ENST00000569063 HNRNPA1L2Q32P51 320 aaKnown RBP20.92■□□□□ 0.94
CLK3-225ENST00000569063 CXorf57Q6NSI4 855 aaKnown RBP20.92■□□□□ 0.94
CLK3-225ENST00000569063 RABEPKQ7Z6M1 372 aa20.92■□□□□ 0.94
CLK3-225ENST00000569063 C14orf80Q86SX3 495 aa20.92■□□□□ 0.94
CLK3-225ENST00000569063 SLC30A5Q8TAD4 765 aa20.92■□□□□ 0.94
CLK3-225ENST00000569063 C1orf74Q96LT6 269 aa20.92■□□□□ 0.94
CLK3-225ENST00000569063 CFAP57Q96MR6 1250 aa20.92■□□□□ 0.94
CLK3-225ENST00000569063 PPP1R9BQ96SB3 815 aa20.92■□□□□ 0.94
CLK3-225ENST00000569063 NUSAP1Q9BXS6 441 aaKnown RBP20.92■□□□□ 0.94
CLK3-225ENST00000569063 SIK2Q9H0K1 926 aa20.92■□□□□ 0.94
CLK3-225ENST00000569063 ITIH6Q6UXX5 1313 aa20.92■□□□□ 0.94
CLK3-225ENST00000569063 ATXN2Q99700 1313 aaKnown RBP20.92■□□□□ 0.94
CLK3-225ENST00000569063 CEP192Q8TEP8 1941 aa20.92■□□□□ 0.94
CLK3-225ENST00000569063 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.91■□□□□ 0.94
CLK3-225ENST00000569063 CLDN11O75508 207 aa20.91■□□□□ 0.94
CLK3-225ENST00000569063 ENDOD1O94919 500 aa20.91■□□□□ 0.94
CLK3-225ENST00000569063 PDGFRAP16234 1089 aa20.91■□□□□ 0.94
CLK3-225ENST00000569063 MZF1P28698 734 aaPredicted RBP20.91■□□□□ 0.94
CLK3-225ENST00000569063 IRAK1P51617 712 aa20.91■□□□□ 0.94
CLK3-225ENST00000569063 RPS14P62263 151 aaKnown RBP20.91■□□□□ 0.94
CLK3-225ENST00000569063 SULT2A1Q06520 285 aa20.91■□□□□ 0.94
CLK3-225ENST00000569063 PTP4A2Q12974 167 aa20.91■□□□□ 0.94
CLK3-225ENST00000569063 ZNF177Q13360 481 aaPredicted RBP20.91■□□□□ 0.94
CLK3-225ENST00000569063 DUOXA1Q1HG43 343 aa20.91■□□□□ 0.94
CLK3-225ENST00000569063 CLEC16AQ2KHT3 1053 aa20.91■□□□□ 0.94
CLK3-225ENST00000569063 SYCP2LQ5T4T6 812 aa20.91■□□□□ 0.94
CLK3-225ENST00000569063 ZNF683Q8IZ20 524 aa20.91■□□□□ 0.94
CLK3-225ENST00000569063 ALG14Q96F25 216 aa20.91■□□□□ 0.94
CLK3-225ENST00000569063 GPR174Q9BXC1 333 aa20.91■□□□□ 0.94
CLK3-225ENST00000569063 RSPH9Q9H1X1 276 aaPredicted RBP20.91■□□□□ 0.94
CLK3-225ENST00000569063 MTG2Q9H4K7 406 aa20.91■□□□□ 0.94
CLK3-225ENST00000569063 METTL5Q9NRN9 209 aaKnown RBP20.91■□□□□ 0.94
CLK3-225ENST00000569063 TBC1D30Q9Y2I9 924 aa20.91■□□□□ 0.94
CLK3-225ENST00000569063 MED19A0JLT2 244 aaPredicted RBP20.9■□□□□ 0.94
CLK3-225ENST00000569063 TARSL2A2RTX5 802 aaKnown RBP20.9■□□□□ 0.94
CLK3-225ENST00000569063 CDX4O14627 284 aaPredicted RBP20.9■□□□□ 0.94
CLK3-225ENST00000569063 RDXP35241 583 aaKnown RBP20.9■□□□□ 0.94
CLK3-225ENST00000569063 GGCXP38435 758 aa20.9■□□□□ 0.94
CLK3-225ENST00000569063 NSFP46459 744 aaKnown RBP20.9■□□□□ 0.94
CLK3-225ENST00000569063 VASPP50552 380 aaPredicted RBP20.9■□□□□ 0.94
CLK3-225ENST00000569063 CDH4P55283 916 aa20.9■□□□□ 0.94
CLK3-225ENST00000569063 GSCP56915 257 aaPredicted RBP20.9■□□□□ 0.94
CLK3-225ENST00000569063 IQCB1Q15051 598 aa20.9■□□□□ 0.94
CLK3-225ENST00000569063 WDR45BQ5MNZ6 344 aa20.9■□□□□ 0.94
CLK3-225ENST00000569063 C9orf64Q5T6V5 341 aa20.9■□□□□ 0.94
CLK3-225ENST00000569063 CACUL1Q86Y37 369 aa20.9■□□□□ 0.94
CLK3-225ENST00000569063 PHF13Q86YI8 300 aaPredicted RBP20.9■□□□□ 0.94
CLK3-225ENST00000569063 HAPLN3Q96S86 360 aa20.9■□□□□ 0.94
CLK3-225ENST00000569063 AGPAT1Q99943 283 aa20.9■□□□□ 0.94
CLK3-225ENST00000569063 C11orf70Q9BRQ4 267 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms