RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 A0A1B0GVT2 93 aa19.23■□□□□ 0.67
LINC01238-205ENST00000567549 TCAF2A6NFQ2 919 aa19.23■□□□□ 0.67
LINC01238-205ENST00000567549 KCNU1A8MYU2 1149 aa19.23■□□□□ 0.67
LINC01238-205ENST00000567549 E5RJQ4 531 aa19.23■□□□□ 0.67
LINC01238-205ENST00000567549 YKT6O15498 198 aa19.23■□□□□ 0.67
LINC01238-205ENST00000567549 HSF2BPO75031 334 aa19.23■□□□□ 0.67
LINC01238-205ENST00000567549 GABBR2O75899 941 aa19.23■□□□□ 0.67
LINC01238-205ENST00000567549 TACR2P21452 398 aa19.23■□□□□ 0.67
LINC01238-205ENST00000567549 BMP6P22004 513 aa19.23■□□□□ 0.67
LINC01238-205ENST00000567549 NUDT1P36639 197 aa19.23■□□□□ 0.67
LINC01238-205ENST00000567549 BPIFB4P59827 614 aa19.23■□□□□ 0.67
LINC01238-205ENST00000567549 PDCLQ13371 301 aa19.23■□□□□ 0.67
LINC01238-205ENST00000567549 ELAVL3Q14576 367 aaKnown RBP19.23■□□□□ 0.67
LINC01238-205ENST00000567549 CST6Q15828 149 aa19.23■□□□□ 0.67
LINC01238-205ENST00000567549 DCAF6Q58WW2 860 aa19.23■□□□□ 0.67
LINC01238-205ENST00000567549 ACBD5Q5T8D3 534 aaPredicted RBP19.23■□□□□ 0.67
LINC01238-205ENST00000567549 SND1Q7KZF4 910 aaKnown RBP eCLIP19.23■□□□□ 0.67
LINC01238-205ENST00000567549 GALNT15Q8N3T1 639 aa19.23■□□□□ 0.67
LINC01238-205ENST00000567549 OR2T34Q8NGX1 318 aa19.23■□□□□ 0.67
LINC01238-205ENST00000567549 C1orf216Q8TAB5 229 aa19.23■□□□□ 0.67
LINC01238-205ENST00000567549 WFDC5Q8TCV5 224 aa19.23■□□□□ 0.67
LINC01238-205ENST00000567549 SYNCQ9H7C4 482 aa19.23■□□□□ 0.67
LINC01238-205ENST00000567549 RRN3Q9NYV6 651 aa19.23■□□□□ 0.67
LINC01238-205ENST00000567549 KIAA1468Q9P260 1216 aa19.23■□□□□ 0.67
LINC01238-205ENST00000567549 ADAMTS1Q9UHI8 967 aa19.23■□□□□ 0.67
LINC01238-205ENST00000567549 PAPSS1O43252 624 aaPredicted RBP19.22■□□□□ 0.67
LINC01238-205ENST00000567549 PCDHGA12O60330 932 aa19.22■□□□□ 0.67
LINC01238-205ENST00000567549 SIN3BO75182 1162 aa19.22■□□□□ 0.67
LINC01238-205ENST00000567549 RNASEH2AO75792 299 aaKnown RBP19.22■□□□□ 0.67
LINC01238-205ENST00000567549 TOP3BO95985 862 aaKnown RBP19.22■□□□□ 0.67
LINC01238-205ENST00000567549 FYNP06241 537 aa19.22■□□□□ 0.67
LINC01238-205ENST00000567549 C5AR1P21730 350 aa19.22■□□□□ 0.67
LINC01238-205ENST00000567549 KRT9P35527 623 aa19.22■□□□□ 0.67
LINC01238-205ENST00000567549 UBE2HP62256 183 aa19.22■□□□□ 0.67
LINC01238-205ENST00000567549 ZC3H12AQ5D1E8 599 aaKnown RBP19.22■□□□□ 0.67
LINC01238-205ENST00000567549 DENND1BQ6P3S1 775 aa19.22■□□□□ 0.67
LINC01238-205ENST00000567549 DBX2Q6ZNG2 339 aa19.22■□□□□ 0.67
LINC01238-205ENST00000567549 ZDHHC17Q8IUH5 632 aa19.22■□□□□ 0.67
LINC01238-205ENST00000567549 MLKLQ8NB16 471 aa19.22■□□□□ 0.67
LINC01238-205ENST00000567549 ADAM32Q8TC27 787 aa19.22■□□□□ 0.67
LINC01238-205ENST00000567549 CAMK1GQ96NX5 476 aa19.22■□□□□ 0.67
LINC01238-205ENST00000567549 DDIT4Q9NX09 232 aa19.22■□□□□ 0.67
LINC01238-205ENST00000567549 DACH1Q9UI36 760 aa19.22■□□□□ 0.67
LINC01238-205ENST00000567549 SLC25A13Q9UJS0 675 aa19.22■□□□□ 0.67
LINC01238-205ENST00000567549 PCDHGC3Q9UN70 934 aa19.22■□□□□ 0.67
LINC01238-205ENST00000567549 FNDC3AQ9Y2H6 1198 aaKnown RBP19.22■□□□□ 0.67
LINC01238-205ENST00000567549 A0A1W2PPC4 97 aa19.21■□□□□ 0.67
LINC01238-205ENST00000567549 FAM47DPA6NHR8 397 aa19.21■□□□□ 0.67
LINC01238-205ENST00000567549 MAGEC1O60732 1142 aa19.21■□□□□ 0.67
LINC01238-205ENST00000567549 CBFA2T3O75081 653 aa19.21■□□□□ 0.67
LINC01238-205ENST00000567549 CDK4P11802 303 aa19.21■□□□□ 0.67
LINC01238-205ENST00000567549 MTIF2P46199 727 aaKnown RBP19.21■□□□□ 0.67
LINC01238-205ENST00000567549 FAM193AP78312 1265 aa19.21■□□□□ 0.67
LINC01238-205ENST00000567549 CCDC15Q0P6D6 951 aa19.21■□□□□ 0.67
LINC01238-205ENST00000567549 ARHGAP44Q17R89 818 aa19.21■□□□□ 0.67
LINC01238-205ENST00000567549 FAM46CQ5VWP2 391 aa19.21■□□□□ 0.67
LINC01238-205ENST00000567549 SYPL2Q5VXT5 272 aa19.21■□□□□ 0.67
LINC01238-205ENST00000567549 RAP1GAP2Q684P5 730 aa19.21■□□□□ 0.67
LINC01238-205ENST00000567549 DHX40Q8IX18 779 aaKnown RBP19.21■□□□□ 0.67
LINC01238-205ENST00000567549 CFAP52Q8N1V2 620 aa19.21■□□□□ 0.67
LINC01238-205ENST00000567549 PPP1R13BQ96KQ4 1090 aa19.21■□□□□ 0.67
LINC01238-205ENST00000567549 LMLNQ96KR4 655 aa19.21■□□□□ 0.67
LINC01238-205ENST00000567549 KDM4CQ9H3R0 1056 aa19.21■□□□□ 0.67
LINC01238-205ENST00000567549 FARP1Q9Y4F1 1045 aaPredicted RBP19.21■□□□□ 0.67
LINC01238-205ENST00000567549 VILLO15195 856 aa19.2■□□□□ 0.66
LINC01238-205ENST00000567549 TNFSF14O43557 240 aa19.2■□□□□ 0.66
LINC01238-205ENST00000567549 IGLV3-25P01717 112 aa19.2■□□□□ 0.66
LINC01238-205ENST00000567549 GOT1P17174 413 aa19.2■□□□□ 0.66
LINC01238-205ENST00000567549 SLC8A1P32418 973 aa19.2■□□□□ 0.66
LINC01238-205ENST00000567549 CCR5P51681 352 aa19.2■□□□□ 0.66
LINC01238-205ENST00000567549 NUMA1Q14980 2115 aa19.2■□□□□ 0.66
LINC01238-205ENST00000567549 KIF19Q2TAC6 998 aa19.2■□□□□ 0.66
LINC01238-205ENST00000567549 C11orf57Q6ZUT1 292 aaPredicted RBP19.2■□□□□ 0.66
LINC01238-205ENST00000567549 MMAAQ8IVH4 418 aaKnown RBP19.2■□□□□ 0.66
LINC01238-205ENST00000567549 OXR1Q8N573 874 aa19.2■□□□□ 0.66
LINC01238-205ENST00000567549 MSANTD4Q8NCY6 345 aa19.2■□□□□ 0.66
LINC01238-205ENST00000567549 CCDC114Q96M63 670 aa19.2■□□□□ 0.66
LINC01238-205ENST00000567549 SPAG5Q96R06 1193 aa19.2■□□□□ 0.66
LINC01238-205ENST00000567549 CRACR2AQ9BSW2 395 aa19.2■□□□□ 0.66
LINC01238-205ENST00000567549 PDCL3Q9H2J4 239 aa19.2■□□□□ 0.66
LINC01238-205ENST00000567549 INTS6Q9UL03 887 aaKnown RBP19.2■□□□□ 0.66
LINC01238-205ENST00000567549 STAP1Q9ULZ2 295 aa19.2■□□□□ 0.66
LINC01238-205ENST00000567549 SNX11Q9Y5W9 270 aa19.2■□□□□ 0.66
LINC01238-205ENST00000567549 FAM208BQ5VWN6 2430 aa19.2■□□□□ 0.66
LINC01238-205ENST00000567549 SRRM3A6NNA2 597 aaPredicted RBP19.19■□□□□ 0.66
LINC01238-205ENST00000567549 MID1O15344 667 aa19.19■□□□□ 0.66
LINC01238-205ENST00000567549 SLC7A4O43246 635 aa19.19■□□□□ 0.66
LINC01238-205ENST00000567549 ARRB1P49407 418 aaPredicted RBP19.19■□□□□ 0.66
LINC01238-205ENST00000567549 VASPP50552 380 aaPredicted RBP19.19■□□□□ 0.66
LINC01238-205ENST00000567549 PLK1P53350 603 aa19.19■□□□□ 0.66
LINC01238-205ENST00000567549 GALCP54803 685 aa19.19■□□□□ 0.66
LINC01238-205ENST00000567549 C9orf64Q5T6V5 341 aa19.19■□□□□ 0.66
LINC01238-205ENST00000567549 CCAR2Q8N163 923 aaKnown RBP19.19■□□□□ 0.66
LINC01238-205ENST00000567549 C1orf131Q8NDD1 294 aaKnown RBP19.19■□□□□ 0.66
LINC01238-205ENST00000567549 OR8D1Q8WZ84 308 aa19.19■□□□□ 0.66
LINC01238-205ENST00000567549 SHC3Q92529 594 aa19.19■□□□□ 0.66
LINC01238-205ENST00000567549 MYO19Q96H55 970 aa19.19■□□□□ 0.66
LINC01238-205ENST00000567549 MRGPRX3Q96LB0 322 aa19.19■□□□□ 0.66
LINC01238-205ENST00000567549 RPRD1AQ96P16 312 aaPredicted RBP19.19■□□□□ 0.66
LINC01238-205ENST00000567549 SLC2A13Q96QE2 648 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms