RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 PRRC2CQ9Y520 2896 aaKnown RBP10.11□□□□□ -0.79
CAPN3-216ENST00000567071 WIPF3A6NGB9 483 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 K7ENM7 598 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 SCAMP1O15126 338 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 SEMA7AO75326 666 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 PRKCGP05129 697 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 TXLNAP40222 546 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 UBA7P41226 1012 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 SYKP43405 635 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 PLA2G4AP47712 749 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 RPIAP49247 311 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 SLC5A3P53794 718 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 MLLT10P55197 1068 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 CST6Q15828 149 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 Q6ZNB5 142 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 IGSF22Q8N9C0 903 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 C1orf127Q8N9H9 656 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 DDI1Q8WTU0 396 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 CYB5D2Q8WUJ1 264 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 GLMNQ92990 594 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 AK8Q96MA6 479 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 PLIN2Q99541 437 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 PANK2Q9BZ23 570 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 DCLK3Q9C098 648 aa10.11□□□□□ -0.79
CAPN3-216ENST00000567071 NIPBLQ6KC79 2804 aaeCLIP10.1□□□□□ -0.79
CAPN3-216ENST00000567071 LY6G6EA0A0G2JKS1 128 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 SLC12A8A0AV02 714 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 K7ESM1 405 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 MID1O15344 667 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 POLR2DO15514 142 aaKnown RBP10.1□□□□□ -0.79
CAPN3-216ENST00000567071 LATO43561 262 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 TBX18O95935 607 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 ZDHHC11BP0C7U3 371 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 WARSP23381 471 aaKnown RBP10.1□□□□□ -0.79
CAPN3-216ENST00000567071 CD82P27701 267 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 ATP1A2P50993 1020 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 ST8SIA6P61647 398 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 HNRNPKP61978 463 aaKnown RBP eCLIP10.1□□□□□ -0.79
CAPN3-216ENST00000567071 KCNMA1Q12791 1236 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 SEPT6Q14141 434 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 KRT79Q5XKE5 535 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 TMEM215Q68D42 235 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 CAVIN1Q6NZI2 390 aaKnown RBP10.1□□□□□ -0.79
CAPN3-216ENST00000567071 GUSBP11Q6P575 273 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 CRTC1Q6UUV9 634 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 CHST9Q7L1S5 443 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 TADA2BQ86TJ2 420 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 RBBP8NLQ8NC74 664 aaPredicted RBP10.1□□□□□ -0.79
CAPN3-216ENST00000567071 OR6B3Q8NGW1 331 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 SCAMP5Q8TAC9 235 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 NAT6Q93015 286 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 DHX58Q96C10 678 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 MMTAG2Q9BU76 263 aaKnown RBP10.1□□□□□ -0.79
CAPN3-216ENST00000567071 SLC12A9Q9BXP2 914 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 ZNF518BQ9C0D4 1074 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 FBXO44Q9H4M3 255 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 CASS4Q9NQ75 786 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 SEL1LQ9UBV2 794 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 PISDQ9UG56 409 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 SERGEFQ9UGK8 458 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 HPSEQ9Y251 543 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 U3KQA8 63 aa10.1□□□□□ -0.79
CAPN3-216ENST00000567071 ANKHD1Q8IWZ3 2542 aaKnown RBP10.1□□□□□ -0.79
CAPN3-216ENST00000567071 FAM237AA0A1B0GTK4 181 aa10.09□□□□□ -0.79
CAPN3-216ENST00000567071 A0A1W2PQC6 194 aa10.09□□□□□ -0.79
CAPN3-216ENST00000567071 PRR19A6NJB7 356 aa10.09□□□□□ -0.79
CAPN3-216ENST00000567071 PRAMEF26H0Y7S4 382 aa10.09□□□□□ -0.79
CAPN3-216ENST00000567071 HNRNPRO43390 633 aaKnown RBP10.09□□□□□ -0.79
CAPN3-216ENST00000567071 CNTN5O94779 1100 aa10.09□□□□□ -0.79
CAPN3-216ENST00000567071 CLDN1O95832 211 aa10.09□□□□□ -0.79
CAPN3-216ENST00000567071 DLDP09622 509 aaKnown RBP10.09□□□□□ -0.79
CAPN3-216ENST00000567071 TMEM191BP0C7N4 346 aa10.09□□□□□ -0.79
CAPN3-216ENST00000567071 GOT1P17174 413 aa10.09□□□□□ -0.79
CAPN3-216ENST00000567071 PTPN1P18031 435 aaKnown RBP10.09□□□□□ -0.79
CAPN3-216ENST00000567071 WT1P19544 449 aaPredicted RBP10.09□□□□□ -0.79
CAPN3-216ENST00000567071 GNL1P36915 607 aaPredicted RBP10.09□□□□□ -0.79
CAPN3-216ENST00000567071 CACNA2D1P54289 1103 aa10.09□□□□□ -0.79
CAPN3-216ENST00000567071 ADPRHP54922 357 aa10.09□□□□□ -0.79
CAPN3-216ENST00000567071 FGL2Q14314 439 aa10.09□□□□□ -0.79
CAPN3-216ENST00000567071 NR0B2Q15466 257 aa10.09□□□□□ -0.79
CAPN3-216ENST00000567071 KLHL40Q2TBA0 621 aa10.09□□□□□ -0.79
CAPN3-216ENST00000567071 SKOR2Q2VWA4 1001 aaPredicted RBP10.09□□□□□ -0.79
CAPN3-216ENST00000567071 SETMARQ53H47 684 aaPredicted RBP10.09□□□□□ -0.79
CAPN3-216ENST00000567071 RSRC2Q7L4I2 434 aaKnown RBP10.09□□□□□ -0.79
CAPN3-216ENST00000567071 TIPARPQ7Z3E1 657 aaKnown RBP10.09□□□□□ -0.79
CAPN3-216ENST00000567071 FMR1NBQ8N0W7 255 aaPredicted RBP10.09□□□□□ -0.79
CAPN3-216ENST00000567071 KBTBD7Q8WVZ9 684 aa10.09□□□□□ -0.79
CAPN3-216ENST00000567071 KCNN1Q92952 543 aa10.09□□□□□ -0.79
CAPN3-216ENST00000567071 CDK5RAP3Q96JB5 506 aa10.09□□□□□ -0.79
CAPN3-216ENST00000567071 MED10Q9BTT4 135 aa10.09□□□□□ -0.79
CAPN3-216ENST00000567071 DMAP1Q9NPF5 467 aaPredicted RBP10.09□□□□□ -0.79
CAPN3-216ENST00000567071 KCND2Q9NZV8 630 aa10.09□□□□□ -0.79
CAPN3-216ENST00000567071 EME2A4GXA9 379 aaPredicted RBP10.08□□□□□ -0.8
CAPN3-216ENST00000567071 EFCAB7A8K855 629 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 H3BM21 787 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 STC2O76061 302 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 ZNF202O95125 648 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 ADH1BP00325 375 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 RNF224P0DH78 156 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 GIMD1P0DJR0 217 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms