RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 SUZ12Q15022 739 aaKnown RBP8.88□□□□□ -0.99
CAPN3-213ENST00000565173 TAF5Q15542 800 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 TEAD4Q15561 434 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 CST6Q15828 149 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 MEA1Q16626 185 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 KIAA0895LQ68EN5 471 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 MARCH9Q86YJ5 346 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 MMAAQ8IVH4 418 aaKnown RBP8.88□□□□□ -0.99
CAPN3-213ENST00000565173 APCDD1Q8J025 514 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 WDTC1Q8N5D0 677 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 ZNF606Q8WXB4 792 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 IGSF8Q969P0 613 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 FAM149B1Q96BN6 582 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 MED15Q96RN5 788 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 PRMT1Q99873 361 aaKnown RBP8.88□□□□□ -0.99
CAPN3-213ENST00000565173 DDX50Q9BQ39 737 aaKnown RBP8.88□□□□□ -0.99
CAPN3-213ENST00000565173 SRRTQ9BXP5 876 aaKnown RBP8.88□□□□□ -0.99
CAPN3-213ENST00000565173 NEUROG2Q9H2A3 272 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 UBE2TQ9NPD8 197 aaPredicted RBP8.88□□□□□ -0.99
CAPN3-213ENST00000565173 FBXL12Q9NXK8 326 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 TJP2Q9UDY2 1190 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 ADAMTS1Q9UHI8 967 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 SCML1Q9UN30 329 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 CTNND2Q9UQB3 1225 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 GPSM3Q9Y4H4 160 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 IGSF10Q6WRI0 2623 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 CABIN1Q9Y6J0 2220 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 ATRXP46100 2492 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 A0A1W2PP55 124 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 BICDL2A1A5D9 508 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 BECN2A8MW95 431 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 KCNU1A8MYU2 1149 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 BIN1O00499 593 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 VILLO15195 856 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 TNFSF14O43557 240 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 GADD45BO75293 160 aaPredicted RBP8.87□□□□□ -0.99
CAPN3-213ENST00000565173 LETM1O95202 739 aaPredicted RBP8.87□□□□□ -0.99
CAPN3-213ENST00000565173 TRUB2O95900 331 aaKnown RBP8.87□□□□□ -0.99
CAPN3-213ENST00000565173 MOCS2O96007 188 aaPredicted RBP8.87□□□□□ -0.99
CAPN3-213ENST00000565173 KRT5P13647 590 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 TACR2P21452 398 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 SLC8A1P32418 973 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 ST8SIA6P61647 398 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 ECT2LQ008S8 904 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 APBA1Q02410 837 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 PDCLQ13371 301 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 CDH18Q13634 790 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 SHBQ15464 509 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 TTC31Q49AM3 519 aaPredicted RBP8.87□□□□□ -0.99
CAPN3-213ENST00000565173 RAP1GAP2Q684P5 730 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 GJB7Q6PEY0 223 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 NCEH1Q6PIU2 408 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 LGI2Q8N0V4 545 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 STK40Q8N2I9 435 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 AADATQ8N5Z0 425 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 MDM1Q8TC05 714 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 FRS2Q8WU20 508 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 FAM131CQ96AQ9 280 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 ALG14Q96F25 216 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 BTN2A3PQ96KV6 586 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 RPL10LQ96L21 214 aaKnown RBP8.87□□□□□ -0.99
CAPN3-213ENST00000565173 SLC6A18Q96N87 628 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 THAP9Q9H5L6 903 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 POPDC2Q9HBU9 364 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.87□□□□□ -0.99
CAPN3-213ENST00000565173 LHX6Q9UPM6 363 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 NCKAP1Q9Y2A7 1128 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.87□□□□□ -0.99
CAPN3-213ENST00000565173 CACNA1GO43497 2377 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 PLXNA2O75051 1894 aa8.87□□□□□ -0.99
CAPN3-213ENST00000565173 A0A1B0GTQ1 180 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 EDDM13A0A1B0GTR0 161 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 A0A1W2PR77 199 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 TYW5A2RUC4 315 aaKnown RBP8.86□□□□□ -0.99
CAPN3-213ENST00000565173 FAM47DPA6NHR8 397 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 GOLGA8CPA6NN73 597 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 CAPN9O14815 690 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 THAP12O43422 761 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 MED7O43513 233 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 DFNA5O60443 496 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 RNASEH1O60930 286 aaKnown RBP8.86□□□□□ -0.99
CAPN3-213ENST00000565173 RNASEH2AO75792 299 aaKnown RBP8.86□□□□□ -0.99
CAPN3-213ENST00000565173 VAV1P15498 845 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 GOT1P17174 413 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 SLC9A1P19634 815 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 C5AR1P21730 350 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 MZF1P28698 734 aaPredicted RBP8.86□□□□□ -0.99
CAPN3-213ENST00000565173 GNA15P30679 374 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 GRK6P43250 576 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 NUMBP49757 651 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 STK19P49842 368 aaPredicted RBP8.86□□□□□ -0.99
CAPN3-213ENST00000565173 VASPP50552 380 aaPredicted RBP8.86□□□□□ -0.99
CAPN3-213ENST00000565173 CCT8P50990 548 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 CCR5P51681 352 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 PLK1P53350 603 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 METAP1P53582 386 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 IL9RQ01113 521 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 PAK1Q13153 545 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 CAMK2BQ13554 666 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 SLC12A1Q13621 1099 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms