RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 ADAMTS14Q8WXS8 1223 aa19.13■□□□□ 0.65
CLN6-204ENST00000564752 ZCCHC14Q8WYQ9 949 aaKnown RBP19.13■□□□□ 0.65
CLN6-204ENST00000564752 BIRC7Q96CA5 298 aa19.13■□□□□ 0.65
CLN6-204ENST00000564752 POPDC2Q9HBU9 364 aa19.13■□□□□ 0.65
CLN6-204ENST00000564752 TAB2Q9NYJ8 693 aa19.13■□□□□ 0.65
CLN6-204ENST00000564752 XPO7Q9UIA9 1087 aaKnown RBP19.13■□□□□ 0.65
CLN6-204ENST00000564752 SCML1Q9UN30 329 aa19.13■□□□□ 0.65
CLN6-204ENST00000564752 PCDHGB2Q9Y5G2 931 aa19.13■□□□□ 0.65
CLN6-204ENST00000564752 NUMA1Q14980 2115 aa19.12■□□□□ 0.65
CLN6-204ENST00000564752 SRRM3A6NNA2 597 aaPredicted RBP19.12■□□□□ 0.65
CLN6-204ENST00000564752 SIN3BO75182 1162 aa19.12■□□□□ 0.65
CLN6-204ENST00000564752 MOCS2O96007 188 aaPredicted RBP19.12■□□□□ 0.65
CLN6-204ENST00000564752 PNMA6AP0CW24 399 aaPredicted RBP19.12■□□□□ 0.65
CLN6-204ENST00000564752 CD27P26842 260 aa19.12■□□□□ 0.65
CLN6-204ENST00000564752 YWHAZP63104 245 aaKnown RBP19.12■□□□□ 0.65
CLN6-204ENST00000564752 CDH18Q13634 790 aa19.12■□□□□ 0.65
CLN6-204ENST00000564752 RAPGEF1Q13905 1077 aa19.12■□□□□ 0.65
CLN6-204ENST00000564752 KIF19Q2TAC6 998 aa19.12■□□□□ 0.65
CLN6-204ENST00000564752 ZC3H12AQ5D1E8 599 aaKnown RBP19.12■□□□□ 0.65
CLN6-204ENST00000564752 PITRM1Q5JRX3 1037 aa19.12■□□□□ 0.65
CLN6-204ENST00000564752 MMS22LQ6ZRQ5 1243 aa19.12■□□□□ 0.65
CLN6-204ENST00000564752 USP30Q70CQ3 517 aa19.12■□□□□ 0.65
CLN6-204ENST00000564752 PNPLA1Q8N8W4 532 aa19.12■□□□□ 0.65
CLN6-204ENST00000564752 NOX5Q96PH1 765 aa19.12■□□□□ 0.65
CLN6-204ENST00000564752 PABPC3Q9H361 631 aaKnown RBP19.12■□□□□ 0.65
CLN6-204ENST00000564752 TM9SF3Q9HD45 589 aa19.12■□□□□ 0.65
CLN6-204ENST00000564752 PCDHGC3Q9UN70 934 aa19.12■□□□□ 0.65
CLN6-204ENST00000564752 ERVW-1Q9UQF0 538 aa19.12■□□□□ 0.65
CLN6-204ENST00000564752 NCKAP1Q9Y2A7 1128 aa19.12■□□□□ 0.65
CLN6-204ENST00000564752 CEP83Q9Y592 693 aa19.12■□□□□ 0.65
CLN6-204ENST00000564752 FREM2Q5SZK8 3169 aa19.12■□□□□ 0.65
CLN6-204ENST00000564752 MUC22E2RYF6 1773 aaPredicted RBP19.11■□□□□ 0.65
CLN6-204ENST00000564752 FOXN3O00409 490 aaPredicted RBP19.11■□□□□ 0.65
CLN6-204ENST00000564752 FSBPO95073 299 aa19.11■□□□□ 0.65
CLN6-204ENST00000564752 LUC7L3O95232 432 aaKnown RBP19.11■□□□□ 0.65
CLN6-204ENST00000564752 TRUB2O95900 331 aaKnown RBP19.11■□□□□ 0.65
CLN6-204ENST00000564752 IGLV3-25P01717 112 aa19.11■□□□□ 0.65
CLN6-204ENST00000564752 TPM2P07951 284 aa19.11■□□□□ 0.65
CLN6-204ENST00000564752 SRPRAP08240 638 aaKnown RBP19.11■□□□□ 0.65
CLN6-204ENST00000564752 TACR2P21452 398 aa19.11■□□□□ 0.65
CLN6-204ENST00000564752 KRT9P35527 623 aa19.11■□□□□ 0.65
CLN6-204ENST00000564752 GRIA4P48058 902 aa19.11■□□□□ 0.65
CLN6-204ENST00000564752 EIF4EBP2Q13542 120 aaPredicted RBP19.11■□□□□ 0.65
CLN6-204ENST00000564752 TEAD4Q15561 434 aa19.11■□□□□ 0.65
CLN6-204ENST00000564752 STX1AQ16623 288 aa19.11■□□□□ 0.65
CLN6-204ENST00000564752 C9orf64Q5T6V5 341 aa19.11■□□□□ 0.65
CLN6-204ENST00000564752 SLCO6A1Q86UG4 719 aa19.11■□□□□ 0.65
CLN6-204ENST00000564752 SLC47A2Q86VL8 602 aa19.11■□□□□ 0.65
CLN6-204ENST00000564752 LGI2Q8N0V4 545 aa19.11■□□□□ 0.65
CLN6-204ENST00000564752 BAHD1Q8TBE0 780 aaPredicted RBP19.11■□□□□ 0.65
CLN6-204ENST00000564752 BTN2A3PQ96KV6 586 aa19.11■□□□□ 0.65
CLN6-204ENST00000564752 ORAI3Q9BRQ5 295 aa19.11■□□□□ 0.65
CLN6-204ENST00000564752 ANO10Q9NW15 660 aa19.11■□□□□ 0.65
CLN6-204ENST00000564752 KIAA1522Q9P206 1035 aaPredicted RBP19.11■□□□□ 0.65
CLN6-204ENST00000564752 APOBEC2Q9Y235 224 aaKnown RBP19.11■□□□□ 0.65
CLN6-204ENST00000564752 ANKRD6Q9Y2G4 727 aa19.11■□□□□ 0.65
CLN6-204ENST00000564752 SNX11Q9Y5W9 270 aa19.11■□□□□ 0.65
CLN6-204ENST00000564752 FHOD1Q9Y613 1164 aa19.11■□□□□ 0.65
CLN6-204ENST00000564752 LAMA5O15230 3695 aa19.11■□□□□ 0.65
CLN6-204ENST00000564752 BAHCC1Q9P281 2608 aa19.1■□□□□ 0.65
CLN6-204ENST00000564752 TARSL2A2RTX5 802 aaKnown RBP19.1■□□□□ 0.65
CLN6-204ENST00000564752 TTC34A8MYJ7 566 aa19.1■□□□□ 0.65
CLN6-204ENST00000564752 RNASEH1O60930 286 aaKnown RBP19.1■□□□□ 0.65
CLN6-204ENST00000564752 MOCS3O95396 460 aa19.1■□□□□ 0.65
CLN6-204ENST00000564752 APOEP02649 317 aa19.1■□□□□ 0.65
CLN6-204ENST00000564752 CAPNS1P04632 268 aa19.1■□□□□ 0.65
CLN6-204ENST00000564752 CTSOP43234 321 aaPredicted RBP19.1■□□□□ 0.65
CLN6-204ENST00000564752 BPIFB4P59827 614 aa19.1■□□□□ 0.65
CLN6-204ENST00000564752 ECT2LQ008S8 904 aa19.1■□□□□ 0.65
CLN6-204ENST00000564752 KCNMA1Q12791 1236 aa19.1■□□□□ 0.65
CLN6-204ENST00000564752 COL9A2Q14055 689 aaPredicted RBP19.1■□□□□ 0.65
CLN6-204ENST00000564752 DRAP1Q14919 205 aaPredicted RBP19.1■□□□□ 0.65
CLN6-204ENST00000564752 SUZ12Q15022 739 aaKnown RBP19.1■□□□□ 0.65
CLN6-204ENST00000564752 CCDC183Q5T5S1 534 aa19.1■□□□□ 0.65
CLN6-204ENST00000564752 KLHDC7AQ5VTJ3 777 aa19.1■□□□□ 0.65
CLN6-204ENST00000564752 CDKAL1Q5VV42 579 aa19.1■□□□□ 0.65
CLN6-204ENST00000564752 RAP1GAP2Q684P5 730 aa19.1■□□□□ 0.65
CLN6-204ENST00000564752 C11orf57Q6ZUT1 292 aaPredicted RBP19.1■□□□□ 0.65
CLN6-204ENST00000564752 DHX40Q8IX18 779 aaKnown RBP19.1■□□□□ 0.65
CLN6-204ENST00000564752 FAM71AQ8IYT1 594 aa19.1■□□□□ 0.65
CLN6-204ENST00000564752 C1orf131Q8NDD1 294 aaKnown RBP19.1■□□□□ 0.65
CLN6-204ENST00000564752 GANCQ8TET4 914 aa19.1■□□□□ 0.65
CLN6-204ENST00000564752 PPP1R13BQ96KQ4 1090 aa19.1■□□□□ 0.65
CLN6-204ENST00000564752 CPXM1Q96SM3 734 aa19.1■□□□□ 0.65
CLN6-204ENST00000564752 FBXL12Q9NXK8 326 aa19.1■□□□□ 0.65
CLN6-204ENST00000564752 TJP2Q9UDY2 1190 aa19.1■□□□□ 0.65
CLN6-204ENST00000564752 SLCO3A1Q9UIG8 710 aa19.1■□□□□ 0.65
CLN6-204ENST00000564752 FLRT2O43155 660 aa19.09■□□□□ 0.65
CLN6-204ENST00000564752 IGHV4-34P06331 123 aa19.09■□□□□ 0.65
CLN6-204ENST00000564752 CLCN1P35523 988 aa19.09■□□□□ 0.65
CLN6-204ENST00000564752 PITX1P78337 314 aaPredicted RBP19.09■□□□□ 0.65
CLN6-204ENST00000564752 SFSWAPQ12872 951 aaKnown RBP19.09■□□□□ 0.65
CLN6-204ENST00000564752 KRT31Q15323 416 aa19.09■□□□□ 0.65
CLN6-204ENST00000564752 TAF5Q15542 800 aa19.09■□□□□ 0.65
CLN6-204ENST00000564752 CST6Q15828 149 aa19.09■□□□□ 0.65
CLN6-204ENST00000564752 KIAA0895LQ68EN5 471 aa19.09■□□□□ 0.65
CLN6-204ENST00000564752 DPY19L2P1Q6NXN4 242 aa19.09■□□□□ 0.65
CLN6-204ENST00000564752 APCDD1Q8J025 514 aa19.09■□□□□ 0.65
CLN6-204ENST00000564752 WDTC1Q8N5D0 677 aa19.09■□□□□ 0.65
CLN6-204ENST00000564752 RHBDD1Q8TEB9 315 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms