RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 FBXO38Q6PIJ6 1188 aa4.82□□□□□ -1.64
CHD9-212ENST00000564641 ZNF347Q96SE7 839 aa4.82□□□□□ -1.64
CHD9-212ENST00000564641 SPAG4Q9NPE6 437 aa4.82□□□□□ -1.64
CHD9-212ENST00000564641 DTNAQ9Y4J8 743 aa4.82□□□□□ -1.64
CHD9-212ENST00000564641 KDM6BO15054 1643 aa4.82□□□□□ -1.64
CHD9-212ENST00000564641 CARMIL1Q5VZK9 1371 aa4.81□□□□□ -1.64
CHD9-212ENST00000564641 TNIKQ9UKE5 1360 aa4.81□□□□□ -1.64
CHD9-212ENST00000564641 J3KTA2 159 aa4.81□□□□□ -1.64
CHD9-212ENST00000564641 NKX2-8O15522 239 aa4.81□□□□□ -1.64
CHD9-212ENST00000564641 FGF18O76093 207 aa4.81□□□□□ -1.64
CHD9-212ENST00000564641 ALDOAP04075 364 aaKnown RBP4.81□□□□□ -1.64
CHD9-212ENST00000564641 ITGA5P08648 1049 aa4.81□□□□□ -1.64
CHD9-212ENST00000564641 HOXC6P09630 235 aa4.81□□□□□ -1.64
CHD9-212ENST00000564641 SLC5A1P13866 664 aa4.81□□□□□ -1.64
CHD9-212ENST00000564641 IGFBP2P18065 325 aa4.81□□□□□ -1.64
CHD9-212ENST00000564641 TLE3Q04726 772 aa4.81□□□□□ -1.64
CHD9-212ENST00000564641 LTBQ06643 244 aa4.81□□□□□ -1.64
CHD9-212ENST00000564641 SAFBQ15424 915 aaKnown RBP eCLIP4.81□□□□□ -1.64
CHD9-212ENST00000564641 Q5PR19 223 aa4.81□□□□□ -1.64
CHD9-212ENST00000564641 C10orf76Q5T2E6 689 aa4.81□□□□□ -1.64
CHD9-212ENST00000564641 ELP5Q8TE02 316 aa4.81□□□□□ -1.64
CHD9-212ENST00000564641 MED30Q96HR3 178 aa4.81□□□□□ -1.64
CHD9-212ENST00000564641 SARGQ9BW04 601 aa4.81□□□□□ -1.64
CHD9-212ENST00000564641 CD93Q9NPY3 652 aa4.81□□□□□ -1.64
CHD9-212ENST00000564641 TM7SF3Q9NS93 570 aa4.81□□□□□ -1.64
CHD9-212ENST00000564641 SIRT3Q9NTG7 399 aaPredicted RBP4.81□□□□□ -1.64
CHD9-212ENST00000564641 TNFSF13BQ9Y275 285 aa4.81□□□□□ -1.64
CHD9-212ENST00000564641 DIP2BQ9P265 1576 aa4.81□□□□□ -1.64
CHD9-212ENST00000564641 IQGAP2Q13576 1575 aa4.8□□□□□ -1.64
CHD9-212ENST00000564641 ERCC6L2Q5T890 1561 aa4.8□□□□□ -1.64
CHD9-212ENST00000564641 FAM234BA2RU67 622 aa4.8□□□□□ -1.64
CHD9-212ENST00000564641 NTSR2O95665 410 aa4.8□□□□□ -1.64
CHD9-212ENST00000564641 FGF3P11487 239 aaPredicted RBP4.8□□□□□ -1.64
CHD9-212ENST00000564641 ENTPD1P49961 510 aa4.8□□□□□ -1.64
CHD9-212ENST00000564641 KEAP1Q14145 624 aa4.8□□□□□ -1.64
CHD9-212ENST00000564641 HLTFQ14527 1009 aaKnown RBP eCLIP4.8□□□□□ -1.64
CHD9-212ENST00000564641 COBLL1Q53SF7 1204 aa4.8□□□□□ -1.64
CHD9-212ENST00000564641 ZNF324BQ6AW86 544 aaPredicted RBP4.8□□□□□ -1.64
CHD9-212ENST00000564641 HIBCHQ6NVY1 386 aaPredicted RBP4.8□□□□□ -1.64
CHD9-212ENST00000564641 ERAP2Q6P179 960 aa4.8□□□□□ -1.64
CHD9-212ENST00000564641 FMNL3Q8IVF7 1028 aa4.8□□□□□ -1.64
CHD9-212ENST00000564641 SLC22A17Q8WUG5 538 aa4.8□□□□□ -1.64
CHD9-212ENST00000564641 WDR60Q8WVS4 1066 aa4.8□□□□□ -1.64
CHD9-212ENST00000564641 OIT3Q8WWZ8 545 aa4.8□□□□□ -1.64
CHD9-212ENST00000564641 ISCUQ9H1K1 167 aa4.8□□□□□ -1.64
CHD9-212ENST00000564641 GJB4Q9NTQ9 266 aa4.8□□□□□ -1.64
CHD9-212ENST00000564641 ABCC2Q92887 1545 aa4.8□□□□□ -1.64
CHD9-212ENST00000564641 GOLGA3Q08378 1498 aa4.8□□□□□ -1.64
CHD9-212ENST00000564641 PODXLO00592 558 aa4.79□□□□□ -1.64
CHD9-212ENST00000564641 KIF3BO15066 747 aa4.79□□□□□ -1.64
CHD9-212ENST00000564641 TAF5LO75529 589 aa4.79□□□□□ -1.64
CHD9-212ENST00000564641 PARNO95453 639 aaKnown RBP4.79□□□□□ -1.64
CHD9-212ENST00000564641 TNFRSF8P28908 595 aa4.79□□□□□ -1.64
CHD9-212ENST00000564641 AAK1Q2M2I8 961 aa4.79□□□□□ -1.64
CHD9-212ENST00000564641 ODF3L2Q3SX64 289 aa4.79□□□□□ -1.64
CHD9-212ENST00000564641 WASHC2DQ5SRD0 308 aa4.79□□□□□ -1.64
CHD9-212ENST00000564641 ASPHD1Q5U4P2 390 aa4.79□□□□□ -1.64
CHD9-212ENST00000564641 NOL8Q76FK4 1167 aaKnown RBP4.79□□□□□ -1.64
CHD9-212ENST00000564641 KDELC2Q7Z4H8 507 aa4.79□□□□□ -1.64
CHD9-212ENST00000564641 ADGRF3Q8IZF5 1079 aa4.79□□□□□ -1.64
CHD9-212ENST00000564641 C7orf57Q8NEG2 295 aa4.79□□□□□ -1.64
CHD9-212ENST00000564641 NUDCD2Q8WVJ2 157 aa4.79□□□□□ -1.64
CHD9-212ENST00000564641 INPP5DQ92835 1189 aa4.79□□□□□ -1.64
CHD9-212ENST00000564641 NEUROG1Q92886 237 aa4.79□□□□□ -1.64
CHD9-212ENST00000564641 PHF21BQ96EK2 531 aa4.79□□□□□ -1.64
CHD9-212ENST00000564641 TBCBQ99426 244 aa4.79□□□□□ -1.64
CHD9-212ENST00000564641 KRCC1Q9NPI7 259 aaPredicted RBP4.79□□□□□ -1.64
CHD9-212ENST00000564641 FSCN3Q9NQT6 498 aa4.79□□□□□ -1.64
CHD9-212ENST00000564641 RNF146Q9NTX7 359 aa4.79□□□□□ -1.64
CHD9-212ENST00000564641 MYO6Q9UM54 1294 aa4.79□□□□□ -1.64
CHD9-212ENST00000564641 CEP83Q9Y592 693 aa4.79□□□□□ -1.64
CHD9-212ENST00000564641 UHRF1BP1LA0JNW5 1464 aa4.79□□□□□ -1.64
CHD9-212ENST00000564641 ADCY10Q96PN6 1610 aa4.79□□□□□ -1.64
CHD9-212ENST00000564641 TSPOAP1O95153 1857 aa4.78□□□□□ -1.64
CHD9-212ENST00000564641 LMTK3Q96Q04 1460 aa4.78□□□□□ -1.64
CHD9-212ENST00000564641 CPA1P15085 419 aa4.78□□□□□ -1.64
CHD9-212ENST00000564641 EEF1GP26641 437 aaKnown RBP4.78□□□□□ -1.64
CHD9-212ENST00000564641 PMPCAQ10713 525 aa4.78□□□□□ -1.64
CHD9-212ENST00000564641 HYAL1Q12794 435 aa4.78□□□□□ -1.64
CHD9-212ENST00000564641 PMS2P11Q13670 270 aa4.78□□□□□ -1.64
CHD9-212ENST00000564641 GALNT3Q14435 633 aa4.78□□□□□ -1.64
CHD9-212ENST00000564641 SLC4A8Q2Y0W8 1093 aa4.78□□□□□ -1.64
CHD9-212ENST00000564641 HSP90AB2PQ58FF8 381 aa4.78□□□□□ -1.64
CHD9-212ENST00000564641 ALG10Q5BKT4 473 aa4.78□□□□□ -1.64
CHD9-212ENST00000564641 ALG10BQ5I7T1 473 aa4.78□□□□□ -1.64
CHD9-212ENST00000564641 FAM209BQ5JX69 171 aa4.78□□□□□ -1.64
CHD9-212ENST00000564641 Q6ZTC4 211 aa4.78□□□□□ -1.64
CHD9-212ENST00000564641 ZNF566Q969W8 418 aa4.78□□□□□ -1.64
CHD9-212ENST00000564641 MAP6D1Q9H9H5 199 aa4.78□□□□□ -1.64
CHD9-212ENST00000564641 TXNRD2Q9NNW7 524 aa4.78□□□□□ -1.64
CHD9-212ENST00000564641 SLC52A1Q9NWF4 448 aa4.78□□□□□ -1.64
CHD9-212ENST00000564641 TBC1D14Q9P2M4 693 aa4.78□□□□□ -1.64
CHD9-212ENST00000564641 UACAQ9BZF9 1416 aa4.78□□□□□ -1.64
CHD9-212ENST00000564641 GLI2P10070 1586 aa4.78□□□□□ -1.64
CHD9-212ENST00000564641 RAPGEF2Q9Y4G8 1499 aa4.77□□□□□ -1.65
CHD9-212ENST00000564641 LOC105369274A0A096LPK9 316 aa4.77□□□□□ -1.65
CHD9-212ENST00000564641 LOC102723532A0A0G2JNH3 316 aa4.77□□□□□ -1.65
CHD9-212ENST00000564641 OR6C75A6NL08 312 aa4.77□□□□□ -1.65
CHD9-212ENST00000564641 MSI1O43347 362 aaKnown RBP4.77□□□□□ -1.65
CHD9-212ENST00000564641 KAT7O95251 611 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms