RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 COPG1Q9Y678 874 aaKnown RBP5.39□□□□□ -1.55
UBR1-205ENST00000564540 CYP3A7-CYP3A51PA0A087WV96 503 aa5.38□□□□□ -1.55
UBR1-205ENST00000564540 AGAP5A6NIR3 686 aa5.38□□□□□ -1.55
UBR1-205ENST00000564540 ZC3H11AO75152 810 aaKnown RBP eCLIP5.38□□□□□ -1.55
UBR1-205ENST00000564540 CYP3A7P24462 503 aa5.38□□□□□ -1.55
UBR1-205ENST00000564540 HTR6P50406 440 aa5.38□□□□□ -1.55
UBR1-205ENST00000564540 PPATQ06203 517 aa5.38□□□□□ -1.55
UBR1-205ENST00000564540 TRIM60Q495X7 471 aa5.38□□□□□ -1.55
UBR1-205ENST00000564540 DAB2IPQ5VWQ8 1189 aa5.38□□□□□ -1.55
UBR1-205ENST00000564540 ISM2Q6H9L7 571 aa5.38□□□□□ -1.55
UBR1-205ENST00000564540 HMBOX1Q6NT76 420 aa5.38□□□□□ -1.55
UBR1-205ENST00000564540 TMEM88Q6PEY1 159 aa5.38□□□□□ -1.55
UBR1-205ENST00000564540 ZDHHC17Q8IUH5 632 aa5.38□□□□□ -1.55
UBR1-205ENST00000564540 WDR83Q9BRX9 315 aaKnown RBP5.38□□□□□ -1.55
UBR1-205ENST00000564540 CRB3Q9BUF7 120 aa5.38□□□□□ -1.55
UBR1-205ENST00000564540 KATNAL1Q9BW62 490 aa5.38□□□□□ -1.55
UBR1-205ENST00000564540 MLXIPQ9HAP2 919 aa5.38□□□□□ -1.55
UBR1-205ENST00000564540 SEPSECSQ9HD40 501 aaKnown RBP5.38□□□□□ -1.55
UBR1-205ENST00000564540 SPAG4Q9NPE6 437 aa5.38□□□□□ -1.55
UBR1-205ENST00000564540 LRCH1Q9Y2L9 728 aa5.38□□□□□ -1.55
UBR1-205ENST00000564540 ABHD14A-ACY1A0A1B0GW23 586 aa5.37□□□□□ -1.55
UBR1-205ENST00000564540 LARGE1O95461 756 aa5.37□□□□□ -1.55
UBR1-205ENST00000564540 RAPGEF1Q13905 1077 aa5.37□□□□□ -1.55
UBR1-205ENST00000564540 PTGR1Q14914 329 aa5.37□□□□□ -1.55
UBR1-205ENST00000564540 PUM3Q15397 648 aaKnown RBP5.37□□□□□ -1.55
UBR1-205ENST00000564540 LIN54Q6MZP7 749 aa5.37□□□□□ -1.55
UBR1-205ENST00000564540 PGBD2Q6P3X8 592 aa5.37□□□□□ -1.55
UBR1-205ENST00000564540 KIAA1324Q6UXG2 1013 aaKnown RBP5.37□□□□□ -1.55
UBR1-205ENST00000564540 CYB5R4Q7L1T6 521 aa5.37□□□□□ -1.55
UBR1-205ENST00000564540 ATG16L2Q8NAA4 619 aa5.37□□□□□ -1.55
UBR1-205ENST00000564540 ASB5Q8WWX0 329 aa5.37□□□□□ -1.55
UBR1-205ENST00000564540 RTKNQ9BST9 563 aa5.37□□□□□ -1.55
UBR1-205ENST00000564540 ZNF700Q9H0M5 742 aa5.37□□□□□ -1.55
UBR1-205ENST00000564540 DAPP1Q9UN19 280 aa5.37□□□□□ -1.55
UBR1-205ENST00000564540 FOXO6A8MYZ6 492 aa5.36□□□□□ -1.55
UBR1-205ENST00000564540 HOXB2P14652 356 aa5.36□□□□□ -1.55
UBR1-205ENST00000564540 HTR3AP46098 478 aa5.36□□□□□ -1.55
UBR1-205ENST00000564540 PNLIPRP1P54315 467 aa5.36□□□□□ -1.55
UBR1-205ENST00000564540 NANOS2P60321 138 aaKnown RBP5.36□□□□□ -1.55
UBR1-205ENST00000564540 KRTAP10-6P60371 365 aaPredicted RBP5.36□□□□□ -1.55
UBR1-205ENST00000564540 TNFAIP2Q03169 654 aa5.36□□□□□ -1.55
UBR1-205ENST00000564540 ZACNQ401N2 412 aa5.36□□□□□ -1.55
UBR1-205ENST00000564540 SCAMP5Q8TAC9 235 aa5.36□□□□□ -1.55
UBR1-205ENST00000564540 TMEM174Q8WUU8 243 aa5.36□□□□□ -1.55
UBR1-205ENST00000564540 RSC1A1Q92681 617 aa5.36□□□□□ -1.55
UBR1-205ENST00000564540 CLMNQ96JQ2 1002 aa5.36□□□□□ -1.55
UBR1-205ENST00000564540 TMEM120AQ9BXJ8 343 aa5.36□□□□□ -1.55
UBR1-205ENST00000564540 KRTAP1-5Q9BYS1 174 aa5.36□□□□□ -1.55
UBR1-205ENST00000564540 FZD3Q9NPG1 666 aa5.36□□□□□ -1.55
UBR1-205ENST00000564540 LIN7CQ9NUP9 197 aaKnown RBP5.36□□□□□ -1.55
UBR1-205ENST00000564540 TNFSF13BQ9Y275 285 aa5.36□□□□□ -1.55
UBR1-205ENST00000564540 PCDHA10Q9Y5I2 948 aa5.36□□□□□ -1.55
UBR1-205ENST00000564540 MBD3L5A6NJ08 208 aaPredicted RBP5.35□□□□□ -1.55
UBR1-205ENST00000564540 IKBKBO14920 756 aa5.35□□□□□ -1.55
UBR1-205ENST00000564540 MSI1O43347 362 aaKnown RBP5.35□□□□□ -1.55
UBR1-205ENST00000564540 SKAP2O75563 359 aaPredicted RBP5.35□□□□□ -1.55
UBR1-205ENST00000564540 NEURL1O76050 574 aa5.35□□□□□ -1.55
UBR1-205ENST00000564540 ACTL6BO94805 426 aa5.35□□□□□ -1.55
UBR1-205ENST00000564540 HEXIM1O94992 359 aaKnown RBP5.35□□□□□ -1.55
UBR1-205ENST00000564540 ITGA2BP08514 1039 aa5.35□□□□□ -1.55
UBR1-205ENST00000564540 POLD2P49005 469 aa5.35□□□□□ -1.55
UBR1-205ENST00000564540 P2RX3P56373 397 aa5.35□□□□□ -1.55
UBR1-205ENST00000564540 PMPCAQ10713 525 aa5.35□□□□□ -1.55
UBR1-205ENST00000564540 GALNT3Q14435 633 aa5.35□□□□□ -1.55
UBR1-205ENST00000564540 C10orf76Q5T2E6 689 aa5.35□□□□□ -1.55
UBR1-205ENST00000564540 ATPAF1Q5TC12 328 aaPredicted RBP5.35□□□□□ -1.55
UBR1-205ENST00000564540 GPSM1Q86YR5 675 aa5.35□□□□□ -1.55
UBR1-205ENST00000564540 EID2BQ96D98 161 aa5.35□□□□□ -1.55
UBR1-205ENST00000564540 ZNF419Q96HQ0 510 aaPredicted RBP5.35□□□□□ -1.55
UBR1-205ENST00000564540 BRD8Q9H0E9 1235 aa5.35□□□□□ -1.55
UBR1-205ENST00000564540 LRFN1Q9P244 771 aa5.35□□□□□ -1.55
UBR1-205ENST00000564540 DAAM1Q9Y4D1 1078 aa5.35□□□□□ -1.55
UBR1-205ENST00000564540 MCIDASD6RGH6 385 aa5.34□□□□□ -1.55
UBR1-205ENST00000564540 H0YGN5 161 aa5.34□□□□□ -1.55
UBR1-205ENST00000564540 SYT5O00445 386 aa5.34□□□□□ -1.55
UBR1-205ENST00000564540 SERPINF1P36955 418 aa5.34□□□□□ -1.55
UBR1-205ENST00000564540 THBS3P49746 956 aa5.34□□□□□ -1.55
UBR1-205ENST00000564540 RCAN1P53805 252 aa5.34□□□□□ -1.55
UBR1-205ENST00000564540 ADPRHP54922 357 aa5.34□□□□□ -1.55
UBR1-205ENST00000564540 GALNTL6Q49A17 601 aa5.34□□□□□ -1.55
UBR1-205ENST00000564540 TTC39AQ5SRH9 613 aa5.34□□□□□ -1.55
UBR1-205ENST00000564540 NFRKBQ6P4R8 1299 aa5.34□□□□□ -1.55
UBR1-205ENST00000564540 C1orf228Q6PIY5 440 aa5.34□□□□□ -1.55
UBR1-205ENST00000564540 TRAPPC11Q7Z392 1133 aa5.34□□□□□ -1.55
UBR1-205ENST00000564540 SLC44A2Q8IWA5 706 aaPredicted RBP5.34□□□□□ -1.55
UBR1-205ENST00000564540 CENPIQ92674 756 aaPredicted RBP5.34□□□□□ -1.55
UBR1-205ENST00000564540 INPP5DQ92835 1189 aa5.34□□□□□ -1.55
UBR1-205ENST00000564540 SLC39A13Q96H72 371 aa5.34□□□□□ -1.55
UBR1-205ENST00000564540 ZNF304Q9HCX3 659 aa5.34□□□□□ -1.55
UBR1-205ENST00000564540 PRDM8Q9NQV8 689 aa5.34□□□□□ -1.55
UBR1-205ENST00000564540 IGKV2D-30A0A075B6S6 120 aa5.33□□□□□ -1.56
UBR1-205ENST00000564540 KCNJ18B7U540 433 aa5.33□□□□□ -1.56
UBR1-205ENST00000564540 ACKR2O00590 384 aa5.33□□□□□ -1.56
UBR1-205ENST00000564540 CYP21A2P08686 494 aa5.33□□□□□ -1.56
UBR1-205ENST00000564540 TBXAS1P24557 533 aaPredicted RBP5.33□□□□□ -1.56
UBR1-205ENST00000564540 TKTP29401 623 aaKnown RBP5.33□□□□□ -1.56
UBR1-205ENST00000564540 CCKARP32238 428 aa5.33□□□□□ -1.56
UBR1-205ENST00000564540 ZBTB16Q05516 673 aa5.33□□□□□ -1.56
UBR1-205ENST00000564540 HDAC1Q13547 482 aaPredicted RBP5.33□□□□□ -1.56
UBR1-205ENST00000564540 UBE4AQ14139 1066 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms