RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 RNF34Q969K3 372 aa15.5■□□□□ 0.07
SPG7-210ENST00000564409 MRGPRX3Q96LB0 322 aa15.5■□□□□ 0.07
SPG7-210ENST00000564409 CPXM1Q96SM3 734 aa15.5■□□□□ 0.07
SPG7-210ENST00000564409 SCNM1Q9BWG6 230 aa15.5■□□□□ 0.07
SPG7-210ENST00000564409 PABPC3Q9H361 631 aaKnown RBP15.5■□□□□ 0.07
SPG7-210ENST00000564409 NDST4Q9H3R1 872 aa15.5■□□□□ 0.07
SPG7-210ENST00000564409 C6orf106Q9H6K1 298 aaPredicted RBP15.5■□□□□ 0.07
SPG7-210ENST00000564409 DDIT4Q9NX09 232 aa15.5■□□□□ 0.07
SPG7-210ENST00000564409 DNAJC12Q9UKB3 198 aa15.5■□□□□ 0.07
SPG7-210ENST00000564409 FZD4Q9ULV1 537 aa15.5■□□□□ 0.07
SPG7-210ENST00000564409 NYNRINQ9P2P1 1898 aaKnown RBP15.5■□□□□ 0.07
SPG7-210ENST00000564409 SPAARA0A1B0GVQ0 90 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 FAM221BA6H8Z2 402 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 DFNA5O60443 496 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 SIN3BO75182 1162 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 CD27P26842 260 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 NOS2P35228 1153 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 SLC6A3Q01959 620 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 TAF5Q15542 800 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 CST6Q15828 149 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 VWA3BQ502W6 1294 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 C9orf64Q5T6V5 341 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 LRSAM1Q6UWE0 723 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 DEFB106AQ8N104 65 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 KDF1Q8NAX2 398 aaPredicted RBP15.49■□□□□ 0.07
SPG7-210ENST00000564409 OR2I1PQ8NGU4 316 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 SNX19Q92543 992 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 BIRC7Q96CA5 298 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 MYEOVQ96EZ4 313 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 PRMT1Q99873 361 aaKnown RBP15.49■□□□□ 0.07
SPG7-210ENST00000564409 TUBGCP2Q9BSJ2 902 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 GAREM1Q9H706 876 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 SYNCQ9H7C4 482 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 SIX2Q9NPC8 291 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 ADAMTS1Q9UHI8 967 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 XPO7Q9UIA9 1087 aaKnown RBP15.49■□□□□ 0.07
SPG7-210ENST00000564409 MSRB2Q9Y3D2 182 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 PAXBP1Q9Y5B6 917 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 USP24Q9UPU5 2620 aa15.49■□□□□ 0.07
SPG7-210ENST00000564409 LRRC72A6NJI9 287 aa15.48■□□□□ 0.07
SPG7-210ENST00000564409 FOXN3O00409 490 aaPredicted RBP15.48■□□□□ 0.07
SPG7-210ENST00000564409 SH3BP5O60239 455 aa15.48■□□□□ 0.07
SPG7-210ENST00000564409 DAB1O75553 588 aa15.48■□□□□ 0.07
SPG7-210ENST00000564409 ADH1BP00325 375 aa15.48■□□□□ 0.07
SPG7-210ENST00000564409 CLCN1P35523 988 aa15.48■□□□□ 0.07
SPG7-210ENST00000564409 SCNN1AP37088 669 aa15.48■□□□□ 0.07
SPG7-210ENST00000564409 SUZ12Q15022 739 aaKnown RBP15.48■□□□□ 0.07
SPG7-210ENST00000564409 HLA-BQ31612 363 aa15.48■□□□□ 0.07
SPG7-210ENST00000564409 OR6B2Q6IFH4 312 aa15.48■□□□□ 0.07
SPG7-210ENST00000564409 OLFML1Q6UWY5 402 aa15.48■□□□□ 0.07
SPG7-210ENST00000564409 DBX2Q6ZNG2 339 aa15.48■□□□□ 0.07
SPG7-210ENST00000564409 CCAR2Q8N163 923 aaKnown RBP15.48■□□□□ 0.07
SPG7-210ENST00000564409 TMEM35BQ8NCS4 154 aa15.48■□□□□ 0.07
SPG7-210ENST00000564409 SKA1Q96BD8 255 aa15.48■□□□□ 0.07
SPG7-210ENST00000564409 CDC6Q99741 560 aa15.48■□□□□ 0.07
SPG7-210ENST00000564409 TM7SF3Q9NS93 570 aa15.48■□□□□ 0.07
SPG7-210ENST00000564409 FBXL12Q9NXK8 326 aa15.48■□□□□ 0.07
SPG7-210ENST00000564409 APOBEC2Q9Y235 224 aaKnown RBP15.48■□□□□ 0.07
SPG7-210ENST00000564409 FLRT2O43155 660 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 KRT37O76014 449 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 F9P00740 461 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 C5AR1P21730 350 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 CDH5P33151 784 aaPredicted RBP15.47■□□□□ 0.07
SPG7-210ENST00000564409 CSNK1EP49674 416 aaKnown RBP15.47■□□□□ 0.07
SPG7-210ENST00000564409 PITX1P78337 314 aaPredicted RBP15.47■□□□□ 0.07
SPG7-210ENST00000564409 BNC1Q01954 994 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 APBA1Q02410 837 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 ELAVL3Q14576 367 aaKnown RBP15.47■□□□□ 0.07
SPG7-210ENST00000564409 MIIPQ5JXC2 388 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 KIAA0895LQ68EN5 471 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 MMS22LQ6ZRQ5 1243 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 FAM183BPQ6ZVS7 135 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 RAB44Q7Z6P3 723 aaPredicted RBP15.47■□□□□ 0.07
SPG7-210ENST00000564409 DSG4Q86SJ6 1040 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 SLC47A2Q86VL8 602 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 PASD1Q8IV76 773 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 DHX40Q8IX18 779 aaKnown RBP15.47■□□□□ 0.07
SPG7-210ENST00000564409 MSANTD4Q8NCY6 345 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 OR2T34Q8NGX1 318 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 GANCQ8TET4 914 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 GATA6Q92908 595 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 IGSF8Q969P0 613 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 RPRD1AQ96P16 312 aaPredicted RBP15.47■□□□□ 0.07
SPG7-210ENST00000564409 OMDQ99983 421 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 NUP62CLQ9H1M0 184 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 TM9SF3Q9HD45 589 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 SLCO3A1Q9UIG8 710 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 PCOLCE2Q9UKZ9 415 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 STAP1Q9ULZ2 295 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 ANKRD6Q9Y2G4 727 aa15.47■□□□□ 0.07
SPG7-210ENST00000564409 ZFHX4Q86UP3 3567 aa15.46■□□□□ 0.07
SPG7-210ENST00000564409 TMEM131Q92545 1883 aa15.46■□□□□ 0.07
SPG7-210ENST00000564409 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.46■□□□□ 0.07
SPG7-210ENST00000564409 A0A1B0GVT2 93 aa15.46■□□□□ 0.07
SPG7-210ENST00000564409 TTC34A8MYJ7 566 aa15.46■□□□□ 0.07
SPG7-210ENST00000564409 HYAL3O43820 417 aaPredicted RBP15.46■□□□□ 0.07
SPG7-210ENST00000564409 CBFA2T3O75081 653 aa15.46■□□□□ 0.07
SPG7-210ENST00000564409 CLDN11O75508 207 aa15.46■□□□□ 0.07
SPG7-210ENST00000564409 FSBPO95073 299 aa15.46■□□□□ 0.07
SPG7-210ENST00000564409 LSM8O95777 96 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms