RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 TBC1D3HP0C7X1 549 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 CCL4P13236 92 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 NME1P15531 152 aaKnown RBP11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 SDSP20132 328 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 RUNX1T1Q06455 604 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 PDAP1Q13442 181 aaKnown RBP11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 ENOX2Q16206 610 aaKnown RBP11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 PFKFB3Q16875 520 aaPredicted RBP11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 POM121L1PQ3SYA9 428 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 TBC1D3GQ6DHY5 549 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 TBC1D3CQ6IPX1 549 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 CWC27Q6UX04 472 aaKnown RBP11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 VSTM1Q6UX27 236 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 MICU3Q86XE3 530 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 TBC1D3Q8IZP1 549 aaPredicted RBP11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 SLC22A18ASQ8N1D0 253 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 SDR16C5Q8N3Y7 309 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 ST6GALNAC3Q8NDV1 305 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 TSPAN18Q96SJ8 248 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 MRPL4Q9BYD3 311 aaKnown RBP11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 KCNMB3Q9NPA1 279 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 PILRAQ9UKJ1 303 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 PLA2G4CQ9UP65 541 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 SLC12A7Q9Y666 1083 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 TAF6LQ9Y6J9 622 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 DNAJB5O75953 348 aa11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 HARSP12081 509 aaKnown RBP11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 PCSK6P29122 969 aa11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 MAT2AP31153 395 aaKnown RBP11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 DNAJA1P31689 397 aaKnown RBP11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 LIFRP42702 1097 aa11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 TUBP50607 506 aa11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 CDK18Q07002 472 aa11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 EHHADHQ08426 723 aa11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 C16orf72Q14CZ0 275 aa11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 SETMARQ53H47 684 aaPredicted RBP11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 ZNF542PQ5EBM4 170 aa11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 HECTD3Q5T447 861 aa11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 FYB2Q5VWT5 728 aa11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 SND1Q7KZF4 910 aaKnown RBP eCLIP11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 SLITRK4Q8IW52 837 aa11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 OR13H1Q8NG92 308 aa11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 HSD17B14Q9BPX1 270 aa11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 CALN1Q9BXU9 219 aa11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 CPEB1Q9BZB8 566 aaKnown RBP11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 IL25Q9H293 177 aa11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 LRRN3Q9H3W5 708 aa11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 MRPL40Q9NQ50 206 aaKnown RBP11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 RBM28Q9NW13 759 aaKnown RBP11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 DDX25Q9UHL0 483 aaKnown RBP11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 B3GALT1Q9Y5Z6 326 aa11.14□□□□□ -0.63
HDGFL3-204ENST00000563790 A0A1B0GUH1 482 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 SLC37A4O43826 429 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 DPM1O60762 260 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 MAP3K6O95382 1288 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 CSF2P04141 144 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 FURINP09958 794 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 XRCC6P12956 609 aaKnown RBP eCLIP11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 GOT1P17174 413 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 MAP4P27816 1152 aaKnown RBP11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 MEOX1P50221 254 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 EFHC2Q5JST6 749 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 SNX30Q5VWJ9 437 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 NCAPH2Q6IBW4 605 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 TRIM69Q86WT6 500 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 UNC5BQ8IZJ1 945 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 NLGN4XQ8N0W4 816 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 IQCKQ8N0W5 287 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 AADATQ8N5Z0 425 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 NLGN4YQ8NFZ3 816 aaPredicted RBP11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 CYB5D2Q8WUJ1 264 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 CCDC74AQ96AQ1 378 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 C18orf12Q96KH6 178 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 SLC25A23Q9BV35 468 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 CCSER2Q9H7U1 834 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 SUN2Q9UH99 717 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 OSGIN2Q9Y236 505 aa11.13□□□□□ -0.63
HDGFL3-204ENST00000563790 GTF3C1Q12789 2109 aa11.12□□□□□ -0.63
HDGFL3-204ENST00000563790 PIKFYVEQ9Y2I7 2098 aa11.12□□□□□ -0.63
HDGFL3-204ENST00000563790 RNASEH1O60930 286 aaKnown RBP11.12□□□□□ -0.63
HDGFL3-204ENST00000563790 ACAT1P24752 427 aaKnown RBP11.12□□□□□ -0.63
HDGFL3-204ENST00000563790 ADSLP30566 484 aaPredicted RBP11.12□□□□□ -0.63
HDGFL3-204ENST00000563790 TAF6P49848 677 aa11.12□□□□□ -0.63
HDGFL3-204ENST00000563790 PPP2R3AQ06190 1150 aa11.12□□□□□ -0.63
HDGFL3-204ENST00000563790 ABHD18Q0P651 414 aa11.12□□□□□ -0.63
HDGFL3-204ENST00000563790 HDAC1Q13547 482 aaPredicted RBP11.12□□□□□ -0.63
HDGFL3-204ENST00000563790 ARHGAP44Q17R89 818 aa11.12□□□□□ -0.63
HDGFL3-204ENST00000563790 ANKRD45Q5TZF3 282 aa11.12□□□□□ -0.63
HDGFL3-204ENST00000563790 TDRD10Q5VZ19 366 aaKnown RBP11.12□□□□□ -0.63
HDGFL3-204ENST00000563790 LINGO4Q6UY18 593 aa11.12□□□□□ -0.63
HDGFL3-204ENST00000563790 FJX1Q86VR8 437 aa11.12□□□□□ -0.63
HDGFL3-204ENST00000563790 PDZD8Q8NEN9 1154 aa11.12□□□□□ -0.63
HDGFL3-204ENST00000563790 OVCA2Q8WZ82 227 aa11.12□□□□□ -0.63
HDGFL3-204ENST00000563790 ZBTB45Q96K62 511 aaPredicted RBP11.12□□□□□ -0.63
HDGFL3-204ENST00000563790 DDA1Q9BW61 102 aa11.12□□□□□ -0.63
HDGFL3-204ENST00000563790 TRIM55Q9BYV6 548 aa11.12□□□□□ -0.63
HDGFL3-204ENST00000563790 DDX43Q9NXZ2 648 aaKnown RBP11.12□□□□□ -0.63
HDGFL3-204ENST00000563790 AKAP7Q9P0M2 348 aaPredicted RBP11.12□□□□□ -0.63
HDGFL3-204ENST00000563790 PCDHB3Q9Y5E6 796 aa11.12□□□□□ -0.63
HDGFL3-204ENST00000563790 PCDHGB7Q9Y5F8 929 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms