RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 TXLNBQ8N3L3 684 aa5.03□□□□□ -1.6
CHD9-206ENST00000562791 ADAMTS15Q8TE58 950 aa5.03□□□□□ -1.6
CHD9-206ENST00000562791 MARK4Q96L34 752 aa5.03□□□□□ -1.6
CHD9-206ENST00000562791 PAGR1Q9BTK6 254 aa5.03□□□□□ -1.6
CHD9-206ENST00000562791 KRTAP2-2Q9BYT5 123 aa5.03□□□□□ -1.6
CHD9-206ENST00000562791 PCDHAC1Q9H158 963 aa5.03□□□□□ -1.6
CHD9-206ENST00000562791 SPATS2LQ9NUQ6 558 aaKnown RBP5.03□□□□□ -1.6
CHD9-206ENST00000562791 MSRB1Q9NZV6 116 aa5.03□□□□□ -1.6
CHD9-206ENST00000562791 ZMYND8Q9ULU4 1186 aaPredicted RBP5.03□□□□□ -1.6
CHD9-206ENST00000562791 RABL2BQ9UNT1 228 aa5.03□□□□□ -1.6
CHD9-206ENST00000562791 COG5Q9UP83 839 aa5.03□□□□□ -1.6
CHD9-206ENST00000562791 FAM50BQ9Y247 325 aa5.03□□□□□ -1.6
CHD9-206ENST00000562791 SCINQ9Y6U3 715 aa5.03□□□□□ -1.6
CHD9-206ENST00000562791 CCDC144AA2RUR9 1427 aa5.03□□□□□ -1.6
CHD9-206ENST00000562791 EIF4G1Q04637 1599 aaKnown RBP5.03□□□□□ -1.6
CHD9-206ENST00000562791 CGNL1Q0VF96 1302 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 TRBV5-3A0A0A0MS03 114 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 ZSCAN9O15535 394 aaPredicted RBP5.02□□□□□ -1.61
CHD9-206ENST00000562791 E2F6O75461 281 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 KRT38O76015 456 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 SMC2O95347 1197 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 TGFB3P10600 412 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 XBP1P17861 261 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 MATN1P21941 496 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 CHMLP26374 656 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 STAT6P42226 847 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 MAGEA9P43362 315 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 ZNF84P51523 738 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 SLC12A2P55011 1212 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 HNRNPH2P55795 449 aaKnown RBP5.02□□□□□ -1.61
CHD9-206ENST00000562791 KRT72Q14CN4 511 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 ELF2Q15723 593 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 CCDC92Q53HC0 331 aaPredicted RBP5.02□□□□□ -1.61
CHD9-206ENST00000562791 ARHGAP15Q53QZ3 475 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 HHATQ5VTY9 493 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 ZNF549Q6P9A3 640 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 SYNE3Q6ZMZ3 975 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 MMS22LQ6ZRQ5 1243 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 PIK3AP1Q6ZUJ8 805 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 CCDC80Q76M96 950 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 MEPCEQ7L2J0 689 aaKnown RBP5.02□□□□□ -1.61
CHD9-206ENST00000562791 CCDC186Q7Z3E2 898 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 LCA5Q86VQ0 697 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 TTC30AQ86WT1 665 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 MYLK4Q86YV6 388 aaPredicted RBP5.02□□□□□ -1.61
CHD9-206ENST00000562791 KRT222Q8N1A0 295 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 GJA10Q969M2 543 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 TTC17Q96AE7 1141 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 C8orf48Q96LL4 319 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 MAGEB5Q9BZ81 275 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 MAP3K20Q9NYL2 800 aaKnown RBP5.02□□□□□ -1.61
CHD9-206ENST00000562791 POLKQ9UBT6 870 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 TMEM98Q9Y2Y6 226 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 NPC1L1Q9UHC9 1359 aa5.02□□□□□ -1.61
CHD9-206ENST00000562791 IGLV5-39A0A0G2JS06 123 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 PABPN1LA6NDY0 278 aaKnown RBP5.01□□□□□ -1.61
CHD9-206ENST00000562791 OR2W5A6NFC9 320 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 TRIM64CA6NLI5 447 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 TMEM110-MUSTN1A8MSY1 372 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 F8W810 466 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 ERLIN1O75477 346 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 BBOX1O75936 387 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 EPN2O95208 641 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 ZNF24P17028 368 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 MAN1A1P33908 653 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 USP8P40818 1118 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 STT3AP46977 705 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 AGTR2P50052 363 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 DMWDQ09019 674 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 PARP10Q53GL7 1025 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.01□□□□□ -1.61
CHD9-206ENST00000562791 CCDC144NLQ6NUI1 221 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 SDCCAG8Q86SQ7 713 aaPredicted RBP5.01□□□□□ -1.61
CHD9-206ENST00000562791 RHPN2Q8IUC4 686 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 CCAR1Q8IX12 1150 aaKnown RBP5.01□□□□□ -1.61
CHD9-206ENST00000562791 TEX11Q8IYF3 940 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.01□□□□□ -1.61
CHD9-206ENST00000562791 IQUBQ8NA54 791 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 OR52L2PQ8NGH6 319 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 NEK9Q8TD19 979 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 BCAS4Q8TDM0 211 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 DNAAF4Q8WXU2 420 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 TAF4BQ92750 862 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 SLC25A28Q96A46 364 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 MSI2Q96DH6 328 aaKnown RBP5.01□□□□□ -1.61
CHD9-206ENST00000562791 BICD1Q96G01 975 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 CCDC34Q96HJ3 373 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 BAG1Q99933 345 aaPredicted RBP5.01□□□□□ -1.61
CHD9-206ENST00000562791 GDF15Q99988 308 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 MAK16Q9BXY0 300 aaKnown RBP5.01□□□□□ -1.61
CHD9-206ENST00000562791 CDCP1Q9H5V8 836 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 CLIP2Q9UDT6 1046 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 ACAD8Q9UKU7 415 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 PCDHA12Q9UN75 941 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 PLEKHG2Q9H7P9 1386 aa5.01□□□□□ -1.61
CHD9-206ENST00000562791 SOS1Q07889 1333 aaPredicted RBP5□□□□□ -1.61
CHD9-206ENST00000562791 APOL1O14791 398 aa5□□□□□ -1.61
CHD9-206ENST00000562791 NPHP1O15259 732 aa5□□□□□ -1.61
CHD9-206ENST00000562791 CTIFO43310 598 aaKnown RBP5□□□□□ -1.61
CHD9-206ENST00000562791 DHHO43323 396 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms