RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 SEMA3BQ13214 749 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 BFSP2Q13515 415 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 ALDH1L2Q3SY69 923 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 ALFQ53S48 1182 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 AARS2Q5JTZ9 985 aaKnown RBP6.31□□□□□ -1.4
CHD9-205ENST00000562785 RINLQ6ZS11 566 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 MCM10Q7L590 875 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 SFTPA1Q8IWL2 248 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 FTSJ3Q8IY81 847 aaKnown RBP6.31□□□□□ -1.4
CHD9-205ENST00000562785 OR4N4Q8N0Y3 316 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 CPT1BQ92523 772 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 RILPL2Q969X0 211 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 MCRS1Q96EZ8 462 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 PRRX2Q99811 253 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 TOR3AQ9H497 397 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 SEPSECSQ9HD40 501 aaKnown RBP6.31□□□□□ -1.4
CHD9-205ENST00000562785 FBXO28Q9NVF7 368 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 RRN3Q9NYV6 651 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 MGAT4CQ9UBM8 478 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 TSPYL4Q9UJ04 414 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 FEM1BQ9UK73 627 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 ZBTB1Q9Y2K1 713 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 LAS1LQ9Y4W2 734 aaKnown RBP6.31□□□□□ -1.4
CHD9-205ENST00000562785 LRRFIP2Q9Y608 721 aaKnown RBP6.31□□□□□ -1.4
CHD9-205ENST00000562785 KDM6AO15550 1401 aaPredicted RBP6.31□□□□□ -1.4
CHD9-205ENST00000562785 N4BP2Q86UW6 1770 aaPredicted RBP6.31□□□□□ -1.4
CHD9-205ENST00000562785 PXDNLA1KZ92 1463 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 KRTAP4-8A0A0G2JLE6 195 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 TMEM191CA6NGB0 347 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 M0QZQ0 153 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 EIF3FO00303 357 aaPredicted RBP6.3□□□□□ -1.4
CHD9-205ENST00000562785 QSOX1O00391 747 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 CHL1O00533 1208 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 NCAM2O15394 837 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 IPO8O15397 1037 aaKnown RBP6.3□□□□□ -1.4
CHD9-205ENST00000562785 CA12O43570 354 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 TK1P04183 234 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 TACR2P21452 398 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 DRD4P21917 467 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 MAPK9P45984 424 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 CCT8P50990 548 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 LMAN2Q12907 356 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 CUL4BQ13620 913 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 RRAGAQ7L523 313 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 KRT27Q7Z3Y8 459 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 HERC6Q8IVU3 1022 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 HMGB4Q8WW32 186 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 NPIPB3Q92617 1050 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 C3orf49Q96BT1 292 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 THUMPD2Q9BTF0 503 aaKnown RBP6.3□□□□□ -1.4
CHD9-205ENST00000562785 TAF1DQ9H5J8 278 aaPredicted RBP6.3□□□□□ -1.4
CHD9-205ENST00000562785 SAP30LQ9HAJ7 183 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 G6PC2Q9NQR9 355 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 SMC4Q9NTJ3 1288 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 NDUFAF4Q9P032 175 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 GJD2Q9UKL4 321 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 UBR2Q8IWV8 1755 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 DOT1LQ8TEK3 1739 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 TOGARAM1Q9Y4F4 1720 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 THSD7AQ9UPZ6 1657 aa6.3□□□□□ -1.4
CHD9-205ENST00000562785 CICQ96RK0 1608 aaPredicted RBP6.29□□□□□ -1.4
CHD9-205ENST00000562785 CCDC187A0A096LP49 1063 aa6.29□□□□□ -1.4
CHD9-205ENST00000562785 SLC38A8A6NNN8 435 aa6.29□□□□□ -1.4
CHD9-205ENST00000562785 FPR3P25089 353 aa6.29□□□□□ -1.4
CHD9-205ENST00000562785 SERPINA4P29622 427 aa6.29□□□□□ -1.4
CHD9-205ENST00000562785 BUD31P41223 144 aaPredicted RBP6.29□□□□□ -1.4
CHD9-205ENST00000562785 RARSP54136 660 aaKnown RBP6.29□□□□□ -1.4
CHD9-205ENST00000562785 ACTR2P61160 394 aa6.29□□□□□ -1.4
CHD9-205ENST00000562785 SIM1P81133 766 aaPredicted RBP6.29□□□□□ -1.4
CHD9-205ENST00000562785 TAF7Q15545 349 aaPredicted RBP6.29□□□□□ -1.4
CHD9-205ENST00000562785 FAM187BQ17R55 369 aa6.29□□□□□ -1.4
CHD9-205ENST00000562785 ZXDCQ2QGD7 858 aaPredicted RBP6.29□□□□□ -1.4
CHD9-205ENST00000562785 TWISTNBQ3B726 338 aaPredicted RBP6.29□□□□□ -1.4
CHD9-205ENST00000562785 GALNTL6Q49A17 601 aa6.29□□□□□ -1.4
CHD9-205ENST00000562785 L1TD1Q5T7N2 865 aaKnown RBP6.29□□□□□ -1.4
CHD9-205ENST00000562785 MEX3CQ5U5Q3 659 aaKnown RBP6.29□□□□□ -1.4
CHD9-205ENST00000562785 ZNF804AQ7Z570 1209 aa6.29□□□□□ -1.4
CHD9-205ENST00000562785 C2CD5Q86YS7 1000 aa6.29□□□□□ -1.4
CHD9-205ENST00000562785 Q8N1X5 172 aa6.29□□□□□ -1.4
CHD9-205ENST00000562785 LINC01465Q8N7H1 131 aa6.29□□□□□ -1.4
CHD9-205ENST00000562785 NEU4Q8WWR8 484 aaPredicted RBP6.29□□□□□ -1.4
CHD9-205ENST00000562785 TBC1D5Q92609 795 aa6.29□□□□□ -1.4
CHD9-205ENST00000562785 FAR2Q96K12 515 aa6.29□□□□□ -1.4
CHD9-205ENST00000562785 PYM1Q9BRP8 204 aaKnown RBP6.29□□□□□ -1.4
CHD9-205ENST00000562785 MECRQ9BV79 373 aa6.29□□□□□ -1.4
CHD9-205ENST00000562785 CINPQ9BW66 212 aaPredicted RBP6.29□□□□□ -1.4
CHD9-205ENST00000562785 BRD8Q9H0E9 1235 aa6.29□□□□□ -1.4
CHD9-205ENST00000562785 CHMP4BQ9H444 224 aaKnown RBP6.29□□□□□ -1.4
CHD9-205ENST00000562785 VPS45Q9NRW7 570 aa6.29□□□□□ -1.4
CHD9-205ENST00000562785 RASSF1Q9NS23 344 aa6.29□□□□□ -1.4
CHD9-205ENST00000562785 LIN7CQ9NUP9 197 aaKnown RBP6.29□□□□□ -1.4
CHD9-205ENST00000562785 PCDHB7Q9Y5E2 793 aa6.29□□□□□ -1.4
CHD9-205ENST00000562785 RNMTO43148 476 aaKnown RBP6.28□□□□□ -1.4
CHD9-205ENST00000562785 SUV39H1O43463 412 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 FAM163BP0C2L3 166 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 TMIGD3P0DMS9 266 aaPredicted RBP6.28□□□□□ -1.4
CHD9-205ENST00000562785 ALADP13716 330 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 ZNF37AP17032 561 aaPredicted RBP6.28□□□□□ -1.4
CHD9-205ENST00000562785 THBS4P35443 961 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 IGHMBP2P38935 993 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms