RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 CYP2C18P33260 490 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 HTR7P34969 479 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 PBX1P40424 430 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 GRIA3P42263 894 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 RARRES1P49788 294 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 CDK7P50613 346 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 ACTR2P61160 394 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 TMF1P82094 1093 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 E2F1Q01094 437 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 SF3A3Q12874 501 aaKnown RBP eCLIP4.19□□□□□ -1.74
HERC1-215ENST00000561436 EFR3AQ14156 821 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 GRM4Q14833 912 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 ERCC6LQ2NKX8 1250 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 BTBD16Q32M84 506 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 AKNAD1Q5T1N1 836 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 KIAA0895LQ68EN5 471 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 DPY19L2P1Q6NXN4 242 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 CYP26C1Q6V0L0 522 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 Q6ZWC4 215 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 GRASPQ7Z6J2 395 aaPredicted RBP4.19□□□□□ -1.74
HERC1-215ENST00000561436 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.19□□□□□ -1.74
HERC1-215ENST00000561436 METTL25Q8N6Q8 603 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.19□□□□□ -1.74
HERC1-215ENST00000561436 FAM98AQ8NCA5 519 aaKnown RBP4.19□□□□□ -1.74
HERC1-215ENST00000561436 AFG1LQ8WV93 481 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 REXO5Q96IC2 774 aaKnown RBP4.19□□□□□ -1.74
HERC1-215ENST00000561436 UBXN10Q96LJ8 280 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 DDX23Q9BUQ8 820 aaKnown RBP4.19□□□□□ -1.74
HERC1-215ENST00000561436 DUSP26Q9BV47 211 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 CCDC134Q9H6E4 229 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 MLXIPQ9HAP2 919 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 CPNE5Q9HCH3 593 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 RXFP3Q9NSD7 469 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 LIN7CQ9NUP9 197 aaKnown RBP4.19□□□□□ -1.74
HERC1-215ENST00000561436 MGAT4CQ9UBM8 478 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 LPAR3Q9UBY5 353 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 SRP68Q9UHB9 627 aaKnown RBP4.19□□□□□ -1.74
HERC1-215ENST00000561436 GABRQQ9UN88 632 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 INSL6Q9Y581 213 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 NFAT5O94916 1531 aa4.19□□□□□ -1.74
HERC1-215ENST00000561436 BRWD3Q6RI45 1802 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 PHRF1Q9P1Y6 1649 aaKnown RBP4.18□□□□□ -1.74
HERC1-215ENST00000561436 WDR27A2RRH5 827 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 ERVV-2B6SEH9 535 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 H0Y3Z8 333 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 AP4M1O00189 453 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 PPFIA2O75334 1257 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 TAF5LO75529 589 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 WDHD1O75717 1129 aaPredicted RBP4.18□□□□□ -1.74
HERC1-215ENST00000561436 RPP40O75818 363 aaKnown RBP4.18□□□□□ -1.74
HERC1-215ENST00000561436 FAM155BO75949 473 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 CER1O95813 267 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 ENGP17813 658 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 XBP1P17861 261 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 MATN1P21941 496 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 EEFSECP57772 596 aaKnown RBP4.18□□□□□ -1.74
HERC1-215ENST00000561436 RNASELQ05823 741 aaKnown RBP4.18□□□□□ -1.74
HERC1-215ENST00000561436 TRIM60Q495X7 471 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 DPY19L3Q6ZPD9 716 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 MOGAT3Q86VF5 341 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 SFTPA1Q8IWL2 248 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 TMEM57Q8N5G2 664 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 PNPLA1Q8N8W4 532 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 FAM71DQ8N9W8 422 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 TEX19Q8NA77 164 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 PIGBQ92521 554 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 RFKQ969G6 155 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 PRR25Q96S07 402 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 PAAF1Q9BRP4 392 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 NOD2Q9HC29 1040 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 PGAP2Q9UHJ9 254 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 ADAMTS5Q9UNA0 930 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 CNTN6Q9UQ52 1028 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 LZTS1Q9Y250 596 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 IFT172Q9UG01 1749 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 CRYBG1Q9Y4K1 1723 aa4.18□□□□□ -1.74
HERC1-215ENST00000561436 PAPPAQ13219 1627 aa4.17□□□□□ -1.74
HERC1-215ENST00000561436 TONSLQ96HA7 1378 aa4.17□□□□□ -1.74
HERC1-215ENST00000561436 RRN3P2A6NIE6 340 aa4.17□□□□□ -1.74
HERC1-215ENST00000561436 TTC34A8MYJ7 566 aa4.17□□□□□ -1.74
HERC1-215ENST00000561436 KIF28PB7ZC32 967 aa4.17□□□□□ -1.74
HERC1-215ENST00000561436 MASP2O00187 686 aa4.17□□□□□ -1.74
HERC1-215ENST00000561436 NCAM2O15394 837 aa4.17□□□□□ -1.74
HERC1-215ENST00000561436 SEPT4O43236 478 aa4.17□□□□□ -1.74
HERC1-215ENST00000561436 CTIFO43310 598 aaKnown RBP4.17□□□□□ -1.74
HERC1-215ENST00000561436 IGLV2-14P01704 120 aa4.17□□□□□ -1.74
HERC1-215ENST00000561436 TK1P04183 234 aa4.17□□□□□ -1.74
HERC1-215ENST00000561436 MMP10P09238 476 aa4.17□□□□□ -1.74
HERC1-215ENST00000561436 FAM163BP0C2L3 166 aa4.17□□□□□ -1.74
HERC1-215ENST00000561436 CD53P19397 219 aa4.17□□□□□ -1.74
HERC1-215ENST00000561436 CTGFP29279 349 aa4.17□□□□□ -1.74
HERC1-215ENST00000561436 THBS4P35443 961 aa4.17□□□□□ -1.74
HERC1-215ENST00000561436 PCP4P48539 62 aa4.17□□□□□ -1.74
HERC1-215ENST00000561436 CCT8P50990 548 aa4.17□□□□□ -1.74
HERC1-215ENST00000561436 CCDC15Q0P6D6 951 aa4.17□□□□□ -1.74
HERC1-215ENST00000561436 MTAPQ13126 283 aa4.17□□□□□ -1.74
HERC1-215ENST00000561436 CUL4BQ13620 913 aa4.17□□□□□ -1.74
HERC1-215ENST00000561436 KCNJ12Q14500 433 aa4.17□□□□□ -1.74
HERC1-215ENST00000561436 ANKRD1Q15327 319 aa4.17□□□□□ -1.74
HERC1-215ENST00000561436 CYP1B1Q16678 543 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms