RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 PITRM1Q5JRX3 1037 aa20.53■□□□□ 0.88
TSPAN3-210ENST00000561277 PLEKHA7Q6IQ23 1121 aa20.53■□□□□ 0.88
TSPAN3-210ENST00000561277 CXorf57Q6NSI4 855 aaKnown RBP20.53■□□□□ 0.88
TSPAN3-210ENST00000561277 APCDD1Q8J025 514 aa20.53■□□□□ 0.88
TSPAN3-210ENST00000561277 ZNF366Q8N895 744 aa20.53■□□□□ 0.88
TSPAN3-210ENST00000561277 CENPIQ92674 756 aaPredicted RBP20.53■□□□□ 0.88
TSPAN3-210ENST00000561277 HINFPQ9BQA5 517 aa20.53■□□□□ 0.88
TSPAN3-210ENST00000561277 WDR87Q6ZQQ6 2873 aa20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 PIEZO1Q92508 2521 aa20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 A0A087X0T9 212 aa20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 CNTN5O94779 1100 aa20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 MOCS3O95396 460 aa20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 EPHX1P07099 455 aa20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 FAM228BP0C875 321 aa20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 HLA-EP13747 358 aa20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 GABRG2P18507 467 aa20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 HOXD11P31277 338 aaPredicted RBP20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 OGDHQ02218 1023 aa20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 ZNF177Q13360 481 aaPredicted RBP20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 ENPP2Q13822 863 aa20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 PTPRNQ16849 979 aa20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 ALFQ53S48 1182 aa20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 SCYL2Q6P3W7 929 aa20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 ZNF683Q8IZ20 524 aa20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 CCDC185Q8N715 623 aa20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 TRIM11Q96F44 468 aa20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 C1orf74Q96LT6 269 aa20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 CNPY3Q9BT09 278 aa20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 ISCUQ9H1K1 167 aa20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 SLC6A17Q9H1V8 727 aa20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 MPP6Q9NZW5 540 aa20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 MUC22E2RYF6 1773 aaPredicted RBP20.52■□□□□ 0.88
TSPAN3-210ENST00000561277 DCLK1O15075 740 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 ZBTB24O43167 697 aaPredicted RBP20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 SYNCRIPO60506 623 aaKnown RBP20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 CLDN11O75508 207 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 DESP17661 470 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 NDUFV2P19404 249 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 PSMA2P25787 234 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 MZF1P28698 734 aaPredicted RBP20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 ADRA1BP35368 520 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 CDH4P55283 916 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 PLEKHG6Q3KR16 790 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 ACBD5Q5T8D3 534 aaPredicted RBP20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 TMC6Q7Z403 805 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 TFAP2DQ7Z6R9 452 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 GAS2L3Q86XJ1 694 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 OR8K1Q8NGG5 319 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 OR52K2Q8NGK3 314 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 RLN3Q8WXF3 142 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 DNAJC7Q99615 494 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 TRIM7Q9C029 511 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 CD248Q9HCU0 757 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 SCINQ9Y6U3 715 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 MFAP3LO75121 409 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 MYBL1P10243 752 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 HNRNPH3P31942 346 aaKnown RBP20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 CTSOP43234 321 aaPredicted RBP20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 ADKP55263 362 aaKnown RBP20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 C5orf22Q49AR2 442 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 USP39Q53GS9 565 aaKnown RBP20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 TTC17Q96AE7 1141 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 ABHD10Q9NUJ1 306 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 ZNHIT6Q9NWK9 470 aaKnown RBP20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 NCDNQ9UBB6 729 aa20.51■□□□□ 0.87
TSPAN3-210ENST00000561277 GPR179Q6PRD1 2367 aa20.5■□□□□ 0.87
TSPAN3-210ENST00000561277 ASLP04424 464 aa20.5■□□□□ 0.87
TSPAN3-210ENST00000561277 EIF4A3P38919 411 aaKnown RBP20.5■□□□□ 0.87
TSPAN3-210ENST00000561277 ST8SIA6P61647 398 aa20.5■□□□□ 0.87
TSPAN3-210ENST00000561277 SLC12A1Q13621 1099 aa20.5■□□□□ 0.87
TSPAN3-210ENST00000561277 TSR1Q2NL82 804 aaKnown RBP20.5■□□□□ 0.87
TSPAN3-210ENST00000561277 ALKBH5Q6P6C2 394 aaKnown RBP20.5■□□□□ 0.87
TSPAN3-210ENST00000561277 KIAA1324Q6UXG2 1013 aaKnown RBP20.5■□□□□ 0.87
TSPAN3-210ENST00000561277 CACUL1Q86Y37 369 aa20.5■□□□□ 0.87
TSPAN3-210ENST00000561277 MAGEB5Q9BZ81 275 aa20.5■□□□□ 0.87
TSPAN3-210ENST00000561277 THAP2Q9H0W7 228 aa20.5■□□□□ 0.87
TSPAN3-210ENST00000561277 TMEM245Q9H330 911 aa20.5■□□□□ 0.87
TSPAN3-210ENST00000561277 OR12D3Q9UGF7 316 aa20.5■□□□□ 0.87
TSPAN3-210ENST00000561277 TMEM191CA6NGB0 347 aa20.49■□□□□ 0.87
TSPAN3-210ENST00000561277 DRGXA6NNA5 263 aa20.49■□□□□ 0.87
TSPAN3-210ENST00000561277 RHOCP08134 193 aa20.49■□□□□ 0.87
TSPAN3-210ENST00000561277 OXCT1P55809 520 aa20.49■□□□□ 0.87
TSPAN3-210ENST00000561277 CCDC122Q5T0U0 273 aa20.49■□□□□ 0.87
TSPAN3-210ENST00000561277 RNF219Q5W0B1 726 aaPredicted RBP20.49■□□□□ 0.87
TSPAN3-210ENST00000561277 SLFN11Q7Z7L1 901 aa20.49■□□□□ 0.87
TSPAN3-210ENST00000561277 KBTBD6Q86V97 674 aa20.49■□□□□ 0.87
TSPAN3-210ENST00000561277 NTAN1Q96AB6 310 aa20.49■□□□□ 0.87
TSPAN3-210ENST00000561277 RPL10LQ96L21 214 aaKnown RBP20.49■□□□□ 0.87
TSPAN3-210ENST00000561277 DEF6Q9H4E7 631 aa20.49■□□□□ 0.87
TSPAN3-210ENST00000561277 MRPL47Q9HD33 250 aaKnown RBP20.49■□□□□ 0.87
TSPAN3-210ENST00000561277 VPS28Q9UK41 221 aa20.49■□□□□ 0.87
TSPAN3-210ENST00000561277 IGLV3-10A0A075B6K4 115 aa20.48■□□□□ 0.87
TSPAN3-210ENST00000561277 FAM72CH0Y354 149 aa20.48■□□□□ 0.87
TSPAN3-210ENST00000561277 ECT2LQ008S8 904 aa20.48■□□□□ 0.87
TSPAN3-210ENST00000561277 GFPT1Q06210 699 aaPredicted RBP20.48■□□□□ 0.87
TSPAN3-210ENST00000561277 ZNF252P-AS1Q0IIN9 211 aa20.48■□□□□ 0.87
TSPAN3-210ENST00000561277 EFHC2Q5JST6 749 aa20.48■□□□□ 0.87
TSPAN3-210ENST00000561277 ARTNQ5T4W7 220 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms