RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ESR1P03372 595 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 ALDOAP04075 364 aaKnown RBP2.13□□□□□ -2.07
RTF1-207ENST00000561076 JUNP05412 331 aaKnown RBP2.13□□□□□ -2.07
RTF1-207ENST00000561076 URODP06132 367 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 HLA-DOAP06340 250 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 SRPRAP08240 638 aaKnown RBP2.13□□□□□ -2.07
RTF1-207ENST00000561076 DBHP09172 617 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 C1SP09871 688 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 SBK3P0C264 359 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 TMEM225BP0DP42 221 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 GHRP10912 638 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 TOP1P11387 765 aaKnown RBP2.13□□□□□ -2.07
RTF1-207ENST00000561076 CYP2A6P11509 494 aaPredicted RBP2.13□□□□□ -2.07
RTF1-207ENST00000561076 C6P13671 934 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 PRG2P13727 222 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 HGFP14210 728 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 CHN1P15882 459 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 PDGFRAP16234 1089 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 FERP16591 822 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 ZNF37AP17032 561 aaPredicted RBP2.13□□□□□ -2.07
RTF1-207ENST00000561076 TYMPP19971 482 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 CHRM3P20309 590 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 CASTP20810 708 aaKnown RBP2.13□□□□□ -2.07
RTF1-207ENST00000561076 FUT4P22083 530 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 MMP8P22894 467 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 GSTM2P28161 218 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 TMOD1P28289 359 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 FMO4P31512 558 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 GUCY1A2P33402 732 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 PRKCIP41743 596 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 KIR2DL3P43628 341 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 CCR10P46092 362 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 GNAQP50148 359 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 NPY4RP50391 375 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 ZNF81P51508 661 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 GPC3P51654 580 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 RPS6KA3P51812 740 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 LUMP51884 338 aaPredicted RBP2.13□□□□□ -2.07
RTF1-207ENST00000561076 SNU13P55769 128 aaKnown RBP2.13□□□□□ -2.07
RTF1-207ENST00000561076 ANTXR2P58335 489 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 LILRA4P59901 499 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 PSMC6P62333 389 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 ARHGAP8P85298 464 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 HTD2P86397 168 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 EFNB1P98172 346 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 TFAP4Q01664 338 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 DEUP1Q05D60 604 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 NIPAL4Q0D2K0 466 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 COX10Q12887 443 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 LMAN2Q12907 356 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 NPRL3Q12980 569 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 BNIP3Q12983 259 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 MTA1Q13330 715 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 SLC14A1Q13336 389 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 ALKBH1Q13686 389 aaKnown RBP2.13□□□□□ -2.07
RTF1-207ENST00000561076 CCNIQ14094 377 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 KRT33BQ14525 404 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 LASP1Q14847 261 aaKnown RBP2.13□□□□□ -2.07
RTF1-207ENST00000561076 RAB3GAP1Q15042 981 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 NAB2Q15742 525 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 NPY5RQ15761 445 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 GRIK4Q16099 956 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 TAZQ16635 292 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 PROSER3Q2NL68 480 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 FUT11Q495W5 492 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 CRY2Q49AN0 593 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 ANKRD20A4Q4UJ75 823 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 SLC9B1Q4ZJI4 515 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 ANKRD20A8PQ5CZ79 823 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 TMEM196Q5HYL7 178 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 ANKRD20A2Q5SQ80 823 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 MFSD14BQ5SR56 506 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 CERCAMQ5T4B2 595 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 CCDC183Q5T5S1 534 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 PHF19Q5T6S3 580 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 ANKRD20A1Q5TYW2 823 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 ANKRD20A3Q5VUR7 823 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 OTUD7BQ6GQQ9 843 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 TMEM81Q6P7N7 255 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 MOXD1Q6UVY6 613 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 SHISA2Q6UWI4 295 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 ATG14Q6ZNE5 492 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 ARHGEF18Q6ZSZ5 1173 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 SEM1Q6ZVN7 128 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 PLEKHM3Q6ZWE6 761 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 MED25Q71SY5 747 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 RUFY3Q7L099 469 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 PLPPR4Q7Z2D5 763 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 KCTD20Q7Z5Y7 419 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 TXNRD3Q86VQ6 643 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 VSIG10LQ86VR7 867 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 MON1AQ86VX9 555 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 AMIGO3Q86WK7 504 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 LDHDQ86WU2 507 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 GAS2L3Q86XJ1 694 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 CEP57Q86XR8 500 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 LURAP1LQ8IV03 231 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 LINC00346Q8IVM7 164 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 ARHGAP12Q8IWW6 846 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms