RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 UBAC1Q9BSL1 405 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 BOCQ9BWV1 1114 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 EMILIN2Q9BXX0 1053 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 STMN4Q9H169 189 aaPredicted RBP6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 PAG1Q9NWQ8 432 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 HPF1Q9NWY4 346 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 PADI4Q9UM07 663 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 SLIT2O94813 1529 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 SPATA31A5Q5VU36 1347 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 SPATA31A7Q8IWB4 1347 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 MATN2O00339 956 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 ZBTB43O43298 467 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 FMO6PO60774 539 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 PLEKP08567 350 aaPredicted RBP6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 PIM1P11309 404 aaPredicted RBP6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 NPR1P16066 1061 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 IL11P20809 199 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 CASP1P29466 404 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 EIF2DP41214 584 aaKnown RBP6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 MAGEA1P43355 309 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 ARFIP2P53365 341 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 CYP4A11Q02928 519 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 SPEM2Q0P670 501 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 KRTCAP3Q53RY4 240 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 FIGNQ5HY92 759 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 KBTBD2Q8IY47 623 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 FAM133AQ8N9E0 248 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 ZMIZ2Q8NF64 920 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 GDAP1Q8TB36 358 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 ADAMTS15Q8TE58 950 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 SCFD2Q8WU76 684 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 CASP10Q92851 521 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 SH3GL1Q99961 368 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 BTBD1Q9H0C5 482 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 OPA3Q9H6K4 179 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 AZI2Q9H6S1 392 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 KRT82Q9NSB4 513 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 QPCTLQ9NXS2 382 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 VPS54Q9P1Q0 977 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 STX18Q9P2W9 335 aaKnown RBP6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 LPAR3Q9UBY5 353 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 ZNF212Q9UDV6 495 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 ZBTB1Q9Y2K1 713 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 TDRKHQ9Y2W6 561 aaKnown RBP6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 ATP6V0A2Q9Y487 856 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 PSAT1Q9Y617 370 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 UMODL1Q5DID0 1318 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 E9PBE3 544 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 RIPK2O43353 540 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 CBFA2T3O75081 653 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 ADAMTS2O95450 1211 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 THP07101 528 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 GTF2H1P32780 548 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 IGHMBP2P38935 993 aaKnown RBP6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 TOB1P50616 345 aaPredicted RBP6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 LGALS4P56470 323 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 RAB30Q15771 203 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 TNFAIP8L3Q5GJ75 292 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 RBM20Q5T481 1227 aaKnown RBP6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 TAOK1Q7L7X3 1001 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 BBS5Q8N3I7 341 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 RCBTB1Q8NDN9 531 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 TOR1AIP2Q8NFQ8 470 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 ANKS1AQ92625 1134 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 GRAMD1AQ96CP6 724 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 RCC1LQ96I51 464 aaKnown RBP6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 CCDC74BQ96LY2 380 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 MOGAT1Q96PD6 335 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 DRC3Q9H069 523 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 EPB41L4BQ9H329 900 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 IL21RQ9HBE5 538 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 EURLQ9NYK6 297 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 ARHGAP20Q9P2F6 1191 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 FETUBQ9UGM5 382 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 HAO1Q9UJM8 370 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 RNF112Q9ULX5 631 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 PLAGL2Q9UPG8 496 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 TSC22D4Q9Y3Q8 395 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 MYO5AQ9Y4I1 1855 aaKnown RBP6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 ANGPTL3Q9Y5C1 460 aa6.94□□□□□ -1.3
TSPAN3-209ENST00000560715 COL5A3P25940 1745 aaPredicted RBP6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 A0A0G2JLW4 131 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 TCRBV5S4A2TA0A5A2 114 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 AGAP14A8MT82 685 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 TBX10O75333 385 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 BAG2O95816 211 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 PLS3P13797 630 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 CD33P20138 364 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 NTF4P34130 210 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 SOX18P35713 384 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 RELAQ04206 551 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 FSTL1Q12841 308 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 COG2Q14746 738 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 ZNF174Q15697 407 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 FAM47CQ5HY64 1035 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 TRAT1Q6PIZ9 186 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 CRTC3Q6UUV7 619 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 IKBIPQ70UQ0 350 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms