RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 HLTFQ14527 1009 aaKnown RBP eCLIP8.85□□□□□ -0.99
TRAF3-209ENST00000560463 PRKD1Q15139 912 aaPredicted RBP8.85□□□□□ -0.99
TRAF3-209ENST00000560463 P3H1Q32P28 736 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 LRIT3Q3SXY7 679 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 FAM133BQ5BKY9 247 aaKnown RBP8.85□□□□□ -0.99
TRAF3-209ENST00000560463 PRSS36Q5K4E3 855 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 ARTNQ5T4W7 220 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 GPR158Q5T848 1215 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 FBXL22Q6P050 247 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 FBXO38Q6PIJ6 1188 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 CEP128Q6ZU80 1094 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 HTR3DQ70Z44 454 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 C14orf80Q86SX3 495 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 NLRP14Q86W24 1093 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 FAM217AQ8IXS0 508 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 CMTM8Q8IZV2 173 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 KIAA1958Q8N8K9 716 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 RTL3Q8N8U3 475 aaKnown RBP8.85□□□□□ -0.99
TRAF3-209ENST00000560463 SHKBP1Q8TBC3 707 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 HTR3CQ8WXA8 447 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 SMG7Q92540 1137 aaKnown RBP8.85□□□□□ -0.99
TRAF3-209ENST00000560463 ART4Q93070 314 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 FATE1Q969F0 183 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 ZNF707Q96C28 371 aaPredicted RBP8.85□□□□□ -0.99
TRAF3-209ENST00000560463 RPRD1AQ96P16 312 aaPredicted RBP8.85□□□□□ -0.99
TRAF3-209ENST00000560463 TSGA13Q96PP4 275 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 SLC22A12Q96S37 553 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 VAT1Q99536 393 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 SLC46A2Q9BY10 475 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 FOXP3Q9BZS1 431 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 DPH5Q9H2P9 285 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 PRDM12Q9H4Q4 367 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 PIDD1Q9HB75 910 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 USP29Q9HBJ7 922 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 GKN1Q9NS71 199 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 HCFC1R1Q9NWW0 138 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 PAK5Q9P286 719 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 MTRF1LQ9UGC7 380 aaKnown RBP8.85□□□□□ -0.99
TRAF3-209ENST00000560463 XPO7Q9UIA9 1087 aaKnown RBP8.85□□□□□ -0.99
TRAF3-209ENST00000560463 ARHGAP26Q9UNA1 814 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 SH3BP1Q9Y3L3 701 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 SNX10Q9Y5X0 201 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 TICRRQ7Z2Z1 1910 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.84□□□□□ -0.99
TRAF3-209ENST00000560463 E2F8A0AVK6 867 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 ESYT3A0FGR9 886 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 TYW5A2RUC4 315 aaKnown RBP8.84□□□□□ -0.99
TRAF3-209ENST00000560463 C5orf60A6NFR6 353 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 EPOPA6NHQ4 379 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 DNALI1O14645 258 aaPredicted RBP8.84□□□□□ -0.99
TRAF3-209ENST00000560463 KCNN4O15554 427 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 MOSPD3O75425 235 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 CLDN11O75508 207 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 SEC31AO94979 1220 aaKnown RBP8.84□□□□□ -0.99
TRAF3-209ENST00000560463 KLKB1P03952 638 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 IRF1P10914 325 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 HOXB8P17481 243 aaPredicted RBP8.84□□□□□ -0.99
TRAF3-209ENST00000560463 RBL1P28749 1068 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 SLC6A4P31645 630 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 GGCXP38435 758 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 CCR2P41597 374 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 CLCN6P51797 869 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 GDF10P55107 478 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 CDH4P55283 916 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 AP1B1Q10567 949 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 AFMIDQ63HM1 303 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 NADSYN1Q6IA69 706 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 TIGD7Q6NT04 549 aaPredicted RBP8.84□□□□□ -0.99
TRAF3-209ENST00000560463 CHRDL2Q6WN34 429 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 Q6ZNB5 142 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 CHST9Q7L1S5 443 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 GRASPQ7Z6J2 395 aaPredicted RBP8.84□□□□□ -0.99
TRAF3-209ENST00000560463 HOOK3Q86VS8 718 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 LGI2Q8N0V4 545 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 CPXM2Q8N436 756 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 EFHBQ8N7U6 833 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 FAM71DQ8N9W8 422 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 CCNYQ8ND76 341 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 VN1R2Q8NFZ6 395 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 ADAMTS19Q8TE59 1207 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 AENQ8WTP8 325 aaKnown RBP8.84□□□□□ -0.99
TRAF3-209ENST00000560463 CAVIN3Q969G5 261 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 IGSF8Q969P0 613 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 TRIM31Q9BZY9 425 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 KLC2Q9H0B6 622 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 ZNF576Q9H609 170 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 KIF9Q9HAQ2 790 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 TDP1Q9NUW8 608 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 GRHL1Q9NZI5 618 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 TRHDEQ9UKU6 1024 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 AGO1Q9UL18 857 aaKnown RBP8.84□□□□□ -0.99
TRAF3-209ENST00000560463 TPX2Q9ULW0 747 aaKnown RBP8.84□□□□□ -0.99
TRAF3-209ENST00000560463 NFU1Q9UMS0 254 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 SNX24Q9Y343 169 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 MFHAS1Q9Y4C4 1052 aa8.84□□□□□ -0.99
TRAF3-209ENST00000560463 GOLGA6L7A0A1B0GV03 622 aa8.83□□□□□ -1
TRAF3-209ENST00000560463 A0A1B0GVM2 712 aa8.83□□□□□ -1
TRAF3-209ENST00000560463 TCAF2A6NFQ2 919 aa8.83□□□□□ -1
TRAF3-209ENST00000560463 ARHGAP42A6NI28 874 aa8.83□□□□□ -1
TRAF3-209ENST00000560463 LEFTY2O00292 366 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms