RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 AKAP5P24588 427 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 TRPC1P48995 793 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 MYL6P60660 151 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 NOP14P78316 857 aaKnown RBP7.34□□□□□ -1.23
ZEB1-216ENST00000559496 GCNT1Q02742 428 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 MPP3Q13368 585 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 BFSP2Q13515 415 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 LPIN1Q14693 890 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 MYBPC3Q14896 1274 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 WHAMMP3Q1A5X7 153 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 LACTB2Q53H82 288 aaPredicted RBP7.34□□□□□ -1.23
ZEB1-216ENST00000559496 EMC10Q5UCC4 262 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 ENOSF1Q7L5Y1 443 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 CPNE8Q86YQ8 564 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 CAGE1Q8TC20 777 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 RUBCNQ92622 972 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 KAT5Q92993 513 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 TBC1D31Q96DN5 1066 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 DESI2Q9BSY9 194 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 YIPF3Q9GZM5 350 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 GPR88Q9GZN0 384 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 RNF38Q9H0F5 515 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 CENPHQ9H3R5 247 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 NHEJ1Q9H9Q4 299 aaPredicted RBP7.34□□□□□ -1.23
ZEB1-216ENST00000559496 ARHGAP20Q9P2F6 1191 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 CIDEBQ9UHD4 219 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 PADI3Q9ULW8 664 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 HPCAL4Q9UM19 191 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 G3BP2Q9UN86 482 aaKnown RBP7.34□□□□□ -1.23
ZEB1-216ENST00000559496 DERAQ9Y315 318 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 C2CD2Q9Y426 696 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 IPPQ9Y573 584 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 PCDHB2Q9Y5E7 798 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 BZW2Q9Y6E2 419 aaKnown RBP7.34□□□□□ -1.23
ZEB1-216ENST00000559496 EPN1Q9Y6I3 576 aaPredicted RBP7.34□□□□□ -1.23
ZEB1-216ENST00000559496 SQORQ9Y6N5 450 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 TRIP11Q15643 1979 aa7.34□□□□□ -1.23
ZEB1-216ENST00000559496 FOXN3O00409 490 aaPredicted RBP7.33□□□□□ -1.24
ZEB1-216ENST00000559496 AKR1B10O60218 316 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 KCNH1O95259 989 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 ASS1P00966 412 aaKnown RBP7.33□□□□□ -1.24
ZEB1-216ENST00000559496 CD4P01730 458 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 ITGB3P05106 788 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 KRT19P08727 400 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 TBXAS1P24557 533 aaPredicted RBP7.33□□□□□ -1.24
ZEB1-216ENST00000559496 ALDH3A1P30838 453 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 PRKCIP41743 596 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 CCNG1P51959 295 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 KIF11P52732 1056 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 GNG11P61952 73 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 GNGT1P63211 74 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 SGSM1Q2NKQ1 1148 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 VMACQ2NL98 169 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 ZNF699Q32M78 642 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 CMPK2Q5EBM0 449 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 GLRA4Q5JXX5 417 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 SPOPLQ6IQ16 392 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 C6orf89Q6UWU4 347 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 SLC39A5Q6ZMH5 540 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 CCDC121Q6ZUS5 278 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 LRRC8DQ7L1W4 858 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 IRF2BP2Q7Z5L9 587 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 VPS36Q86VN1 386 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 BEST2Q8NFU1 509 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 NSMCE1Q8WV22 266 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 SHC3Q92529 594 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.33□□□□□ -1.24
ZEB1-216ENST00000559496 EPC1Q9H2F5 836 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 HAUS4Q9H6D7 363 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 APOBEC3GQ9HC16 384 aaKnown RBP7.33□□□□□ -1.24
ZEB1-216ENST00000559496 DPP3Q9NY33 737 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 ATXN10Q9UBB4 475 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 SIX4Q9UIU6 781 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 ITGA11Q9UKX5 1188 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 PPP2R2CQ9Y2T4 447 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 RWDD3Q9Y3V2 267 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 UMODL1Q5DID0 1318 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 TARSL2A2RTX5 802 aaKnown RBP7.33□□□□□ -1.24
ZEB1-216ENST00000559496 LRRD1A4D1F6 860 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 C7orf72A4D263 438 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 PRRG2O14669 202 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 SMAD7O15105 426 aaKnown RBP7.33□□□□□ -1.24
ZEB1-216ENST00000559496 XPOTO43592 962 aaKnown RBP7.33□□□□□ -1.24
ZEB1-216ENST00000559496 MGEA5O60502 916 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 SMIM24O75264 130 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 FAM200BP0CF97 657 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 NCAM1P13591 858 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 KRT5P13647 590 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 KCNE1P15382 129 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 ANXA13P27216 316 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 ATICP31939 592 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 GUCY2FP51841 1108 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 KRT83P78385 493 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 RBP5P82980 135 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 CUL2Q13617 745 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 SPA17Q15506 151 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 CLPPQ16740 277 aaPredicted RBP7.33□□□□□ -1.24
ZEB1-216ENST00000559496 TRIM60Q495X7 471 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 PABPC1LQ4VXU2 614 aaKnown RBP7.33□□□□□ -1.24
ZEB1-216ENST00000559496 XKR4Q5GH76 650 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms