RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 SUN2Q9UH99 717 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 INTS6Q9UL03 887 aaKnown RBP13□□□□□ -0.33
LRRC28-214ENST00000559433 VANGL2Q9ULK5 521 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 PAXBP1Q9Y5B6 917 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 HS3ST4Q9Y661 456 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 CACNA1AO00555 2505 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 LAMA1P25391 3075 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 GON4LQ3T8J9 2241 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 A0A1B0GVM2 712 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 SYCE3A1L190 88 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 TCAF2A6NFQ2 919 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 ADCY5O95622 1261 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 F9P00740 461 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 CFIP05156 583 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 MMP8P22894 467 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 NSFP46459 744 aaKnown RBP12.99□□□□□ -0.33
LRRC28-214ENST00000559433 CXCR3P49682 368 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 LIMK1P53667 647 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 CAMK2GQ13555 558 aaPredicted RBP12.99□□□□□ -0.33
LRRC28-214ENST00000559433 PLEKHG6Q3KR16 790 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 FILIP1LQ4L180 1135 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 BRMS1LQ5PSV4 323 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 LRSAM1Q6UWE0 723 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 PHLDB2Q86SQ0 1253 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 METTL3Q86U44 580 aaKnown RBP12.99□□□□□ -0.33
LRRC28-214ENST00000559433 OR2T3Q8NH03 318 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 FOXJ1Q92949 421 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 IGSF8Q969P0 613 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 NT5C3BQ969T7 300 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 PGAP3Q96FM1 320 aaPredicted RBP12.99□□□□□ -0.33
LRRC28-214ENST00000559433 CFAP57Q96MR6 1250 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 FUCA2Q9BTY2 467 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 EDEM2Q9BV94 578 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 SIK2Q9H0K1 926 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 RXFP3Q9NSD7 469 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 ARHGEF38Q9NXL2 777 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 USP36Q9P275 1121 aaKnown RBP12.99□□□□□ -0.33
LRRC28-214ENST00000559433 TMEM59LQ9UK28 342 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 DOCK4Q8N1I0 1966 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 ADAMTS9Q9P2N4 1935 aa12.99□□□□□ -0.33
LRRC28-214ENST00000559433 C4orf47A7E2U8 309 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 PATE3B3GLJ2 98 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 TEX33O43247 280 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 GNSP15586 552 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 PDGFRAP16234 1089 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 PTMSP20962 102 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 ITPKAP23677 461 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 CD6P30203 668 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 RDXP35241 583 aaKnown RBP12.98□□□□□ -0.33
LRRC28-214ENST00000559433 CTSOP43234 321 aaPredicted RBP12.98□□□□□ -0.33
LRRC28-214ENST00000559433 TPMTP51580 245 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 IRAK1P51617 712 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 ECT2LQ008S8 904 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 GFPT1Q06210 699 aaPredicted RBP12.98□□□□□ -0.33
LRRC28-214ENST00000559433 ZNF33AQ06730 810 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 DUOXA1Q1HG43 343 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 CLEC16AQ2KHT3 1053 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 TRIM61Q5EBN2 209 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 PPM1JQ5JR12 505 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 WDR45BQ5MNZ6 344 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 RNF219Q5W0B1 726 aaPredicted RBP12.98□□□□□ -0.33
LRRC28-214ENST00000559433 TRNP1Q6NT89 227 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 ARCQ7LC44 396 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 APCDD1Q8J025 514 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 EMC1Q8N766 993 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 TOE1Q96GM8 510 aaKnown RBP12.98□□□□□ -0.33
LRRC28-214ENST00000559433 HSPA12BQ96MM6 686 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 PPP1R9BQ96SB3 815 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 PCDHB18PQ96TA0 734 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 AGPAT1Q99943 283 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 NUP58Q9BVL2 599 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 FBRSQ9HAH7 460 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 TMEM9BQ9NQ34 198 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 PRSS16Q9NQE7 514 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 ANLNQ9NQW6 1124 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 ITM2CQ9NQX7 267 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 TMEM51Q9NW97 253 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 ERVW-1Q9UQF0 538 aa12.98□□□□□ -0.33
LRRC28-214ENST00000559433 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.97□□□□□ -0.33
LRRC28-214ENST00000559433 LNP1A1A4G5 178 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 RNASEH1O60930 286 aaKnown RBP12.97□□□□□ -0.33
LRRC28-214ENST00000559433 SRPRAP08240 638 aaKnown RBP12.97□□□□□ -0.33
LRRC28-214ENST00000559433 CCDC172P0C7W6 258 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 UNGP13051 313 aaPredicted RBP12.97□□□□□ -0.33
LRRC28-214ENST00000559433 FERP16591 822 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 HOXD12P35452 270 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 NNMTP40261 264 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 NUMBP49757 651 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 OXCT1P55809 520 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 IRX4P78413 519 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 ATP11AP98196 1134 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 SFSWAPQ12872 951 aaKnown RBP12.97□□□□□ -0.33
LRRC28-214ENST00000559433 ZNF177Q13360 481 aaPredicted RBP12.97□□□□□ -0.33
LRRC28-214ENST00000559433 SLC12A1Q13621 1099 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 IQCB1Q15051 598 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 UAP1L1Q3KQV9 507 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 CXorf57Q6NSI4 855 aaKnown RBP12.97□□□□□ -0.33
LRRC28-214ENST00000559433 C14orf80Q86SX3 495 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 FAM124AQ86V42 546 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 SLC41A1Q8IVJ1 513 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms