RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 ALG6Q9Y672 507 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 SHROOM3Q8TF72 1996 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 A0A0D9SEW6 157 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 A0A1B0GVM2 712 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 TCAF2A6NFQ2 919 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 CREB3O43889 395 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 PRPSAP2O60256 369 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 RNF8O76064 485 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 AOC1P19801 751 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 GLDCP23378 1020 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 KIR2DL1P43626 348 aaPredicted RBP11.22□□□□□ -0.61
TPM1-217ENST00000559108 NOP2P46087 812 aaKnown RBP11.22□□□□□ -0.61
TPM1-217ENST00000559108 DGKGP49619 791 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 SEC13P55735 322 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 NR1H3Q13133 447 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 DPYSQ14117 519 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 ACAP1Q15027 740 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 EFHC2Q5JST6 749 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 EGFLAMQ63HQ2 1017 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 GRAMD4Q6IC98 578 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 C11orf63Q6NUN7 778 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 MFN1Q8IWA4 741 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 REXO1L1PQ8IX06 675 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 FIBINQ8TAL6 211 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 CLDN23Q96B33 292 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 CACNA1IQ9P0X4 2223 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 DEC1Q9P2X7 70 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 SLC12A6Q9UHW9 1150 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 TBC1D30Q9Y2I9 924 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 PPP2R2CQ9Y2T4 447 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 ACTL7AQ9Y615 435 aa11.22□□□□□ -0.61
TPM1-217ENST00000559108 MAN2B1O00754 1011 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 ADAM23O75077 832 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 RNF40O75150 1001 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 PALMO75781 387 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 PABPC1P11940 636 aaKnown RBP11.21□□□□□ -0.61
TPM1-217ENST00000559108 TNNT1P13805 278 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 GRIA2P42262 883 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 KRT83P78385 493 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 ADCY2Q08462 1091 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 CCDC173Q0VFZ6 552 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 DPYSL3Q14195 570 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 PTPRNQ16849 979 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 ARL13BQ3SXY8 428 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 PPP6R3Q5H9R7 873 aaPredicted RBP11.21□□□□□ -0.61
TPM1-217ENST00000559108 PITRM1Q5JRX3 1037 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 DGKKQ5KSL6 1271 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 RFX8Q6ZV50 586 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 CHST9Q7L1S5 443 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 POLNQ7Z5Q5 900 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 BMP8AQ7Z5Y6 402 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 FBXL6Q8N531 539 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 OR7D4Q8NG98 312 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 USP33Q8TEY7 942 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 CYB5D2Q8WUJ1 264 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 TEKT4Q8WW24 435 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 ALG3Q92685 438 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 PBXIP1Q96AQ6 731 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 TBC1D31Q96DN5 1066 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 ERLEC1Q96DZ1 483 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 MSANTD3Q96H12 275 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 MYO19Q96H55 970 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 MRGPRX3Q96LB0 322 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 CSPG4P5Q96PW8 444 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 DDX50Q9BQ39 737 aaKnown RBP11.21□□□□□ -0.61
TPM1-217ENST00000559108 SLC2A11Q9BYW1 496 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 ZYG11BQ9C0D3 744 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 MTG2Q9H4K7 406 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 LMAN1LQ9HAT1 526 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 CD248Q9HCU0 757 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 PPARGC1AQ9UBK2 798 aaKnown RBP11.21□□□□□ -0.61
TPM1-217ENST00000559108 GGA2Q9UJY4 613 aa11.21□□□□□ -0.61
TPM1-217ENST00000559108 PACSIN2Q9UNF0 486 aaPredicted RBP11.21□□□□□ -0.61
TPM1-217ENST00000559108 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.21□□□□□ -0.61
TPM1-217ENST00000559108 WASH3PC4AMC7 463 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 H0Y626 953 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 SGK1O00141 431 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 SNAP91O60641 907 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 GPR37L1O60883 481 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 IPO7O95373 1038 aaKnown RBP11.2□□□□□ -0.62
TPM1-217ENST00000559108 FTCDO95954 541 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 CYBBP04839 570 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 CCDC175P0C221 793 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 RHOQP17081 205 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 COL9A1P20849 921 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 AMPD1P23109 780 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 EPHB2P29323 1055 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 ACVRL1P37023 503 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 WASP42768 502 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 SSR1P43307 286 aaKnown RBP11.2□□□□□ -0.62
TPM1-217ENST00000559108 STK19P49842 368 aaPredicted RBP11.2□□□□□ -0.62
TPM1-217ENST00000559108 AIF1P55008 147 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 CDH4P55283 916 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 CDH18Q13634 790 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 LLGL1Q15334 1064 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 PLEKHG6Q3KR16 790 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 C2orf27AQ580R0 203 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 RABGAP1LQ5R372 815 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 FAM182AQ5T1J6 154 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 MBLAC2Q68D91 279 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms