RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 NUP205Q92621 2012 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.79□□□□□ -0.36
GABPB1-208ENST00000558970 H3BRJ5 948 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 PSTPIP1O43586 416 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 CACNG3O60359 315 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 AMPD1P23109 780 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 OR1E1P30953 314 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 CDH4P55283 916 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 LMAN2Q12907 356 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 SEMA3BQ13214 749 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 ZNF177Q13360 481 aaPredicted RBP12.79□□□□□ -0.36
GABPB1-208ENST00000558970 DPYSL3Q14195 570 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 DPYSL2Q16555 572 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 MANEALQ5VSG8 457 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 TTC39BQ5VTQ0 682 aaPredicted RBP12.79□□□□□ -0.36
GABPB1-208ENST00000558970 RFX8Q6ZV50 586 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 NT5DC3Q86UY8 548 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 RALGPS2Q86X27 583 aaPredicted RBP12.79□□□□□ -0.36
GABPB1-208ENST00000558970 ZNF354CQ86Y25 554 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 ETFBKMTQ8IXQ9 262 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 CCDC33Q8N5R6 958 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 OR52K2Q8NGK3 314 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 ERLEC1Q96DZ1 483 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 CELF6Q96J87 481 aaKnown RBP12.79□□□□□ -0.36
GABPB1-208ENST00000558970 PNKPQ96T60 521 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 PSMB7Q99436 277 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 MUC3BQ9H195 1237 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 C8orf33Q9H7E9 229 aaPredicted RBP12.79□□□□□ -0.36
GABPB1-208ENST00000558970 TBC1D17Q9HA65 648 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 TRPV5Q9NQA5 729 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 RBM12Q9NTZ6 932 aaKnown RBP12.79□□□□□ -0.36
GABPB1-208ENST00000558970 WNT16Q9UBV4 365 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 NEU3Q9UQ49 428 aa12.79□□□□□ -0.36
GABPB1-208ENST00000558970 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.79□□□□□ -0.36
GABPB1-208ENST00000558970 IGLV3-10A0A075B6K4 115 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 EGFP01133 1207 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 APODP05090 189 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 RHOCP08134 193 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 KDELR1P24390 212 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 MZF1P28698 734 aaPredicted RBP12.78□□□□□ -0.36
GABPB1-208ENST00000558970 HLA-FP30511 346 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 CTNNA1P35221 906 aaKnown RBP12.78□□□□□ -0.36
GABPB1-208ENST00000558970 CSKP41240 450 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 DYNLT1P63172 113 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 AMPD2Q01433 879 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 SIGLEC14Q08ET2 396 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 ZNF211Q13398 564 aaPredicted RBP12.78□□□□□ -0.36
GABPB1-208ENST00000558970 GEN1Q17RS7 908 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 ZNF569Q5MCW4 686 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 ARTNQ5T4W7 220 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 RNF219Q5W0B1 726 aaPredicted RBP12.78□□□□□ -0.36
GABPB1-208ENST00000558970 KAZNQ674X7 775 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 AADACL2Q6P093 401 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 ZNF852Q6ZMS4 543 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 CHST9Q7L1S5 443 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 POLNQ7Z5Q5 900 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 ALYREFQ86V81 257 aaKnown RBP12.78□□□□□ -0.36
GABPB1-208ENST00000558970 EDAQ92838 391 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 CALR3Q96L12 384 aaKnown RBP12.78□□□□□ -0.36
GABPB1-208ENST00000558970 CSPG4P5Q96PW8 444 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 CIPCQ9C0C6 399 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 CATSPERBQ9H7T0 1116 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 ETNK2Q9NVF9 386 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 DDX56Q9NY93 547 aaKnown RBP12.78□□□□□ -0.36
GABPB1-208ENST00000558970 PPARGC1AQ9UBK2 798 aaKnown RBP12.78□□□□□ -0.36
GABPB1-208ENST00000558970 GGA2Q9UJY4 613 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 MTF2Q9Y483 593 aaPredicted RBP12.78□□□□□ -0.36
GABPB1-208ENST00000558970 CHD5Q8TDI0 1954 aa12.78□□□□□ -0.36
GABPB1-208ENST00000558970 MUC22E2RYF6 1773 aaPredicted RBP12.77□□□□□ -0.36
GABPB1-208ENST00000558970 TBC1D3BA6NDS4 549 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 SHISA7A6NL88 538 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 DRGXA6NNA5 263 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 ENC1O14682 589 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 CLDN11O75508 207 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 KAT7O95251 611 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 MAP3K6O95382 1288 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 PABPC1P11940 636 aaKnown RBP12.77□□□□□ -0.37
GABPB1-208ENST00000558970 KRT10P13645 584 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 RHOQP17081 205 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 ERCC2P18074 760 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 TARSP26639 723 aaKnown RBP12.77□□□□□ -0.37
GABPB1-208ENST00000558970 ARSEP51690 589 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 NRG1Q02297 640 aaPredicted RBP12.77□□□□□ -0.37
GABPB1-208ENST00000558970 PRKCQQ04759 706 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 FUT11Q495W5 492 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 C5orf22Q49AR2 442 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 ANKRD20A8PQ5CZ79 823 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 MPP7Q5T2T1 576 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 ACBD5Q5T8D3 534 aaPredicted RBP12.77□□□□□ -0.37
GABPB1-208ENST00000558970 FSTL4Q6MZW2 842 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 CXorf57Q6NSI4 855 aaKnown RBP12.77□□□□□ -0.37
GABPB1-208ENST00000558970 MFSD7Q6UXD7 560 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 ZNF662Q6ZS27 426 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 TRIM67Q6ZTA4 783 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 ANKS1BQ7Z6G8 1248 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 NLRP14Q86W24 1093 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 RFX6Q8HWS3 928 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 PSTKQ8IV42 348 aaKnown RBP12.77□□□□□ -0.37
GABPB1-208ENST00000558970 APCDD1Q8J025 514 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 SLC35F6Q8N357 371 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms