RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 ST8SIA6P61647 398 aa12.87□□□□□ -0.35
SLIRP-209ENST00000557342 RPL7AP62424 266 aaKnown RBP12.87□□□□□ -0.35
SLIRP-209ENST00000557342 SULT2A1Q06520 285 aa12.87□□□□□ -0.35
SLIRP-209ENST00000557342 MAMLD1Q13495 774 aa12.87□□□□□ -0.35
SLIRP-209ENST00000557342 FUT11Q495W5 492 aa12.87□□□□□ -0.35
SLIRP-209ENST00000557342 FSCBQ5H9T9 825 aa12.87□□□□□ -0.35
SLIRP-209ENST00000557342 PITRM1Q5JRX3 1037 aa12.87□□□□□ -0.35
SLIRP-209ENST00000557342 C14orf80Q86SX3 495 aa12.87□□□□□ -0.35
SLIRP-209ENST00000557342 CYB5D2Q8WUJ1 264 aa12.87□□□□□ -0.35
SLIRP-209ENST00000557342 HMGB4Q8WW32 186 aa12.87□□□□□ -0.35
SLIRP-209ENST00000557342 SORCS1Q8WY21 1168 aa12.87□□□□□ -0.35
SLIRP-209ENST00000557342 NTAN1Q96AB6 310 aa12.87□□□□□ -0.35
SLIRP-209ENST00000557342 ZNF653Q96CK0 615 aa12.87□□□□□ -0.35
SLIRP-209ENST00000557342 SPACA7Q96KW9 195 aa12.87□□□□□ -0.35
SLIRP-209ENST00000557342 ANP32EQ9BTT0 268 aa12.87□□□□□ -0.35
SLIRP-209ENST00000557342 OSBPL2Q9H1P3 480 aa12.87□□□□□ -0.35
SLIRP-209ENST00000557342 SUN2Q9UH99 717 aa12.87□□□□□ -0.35
SLIRP-209ENST00000557342 IGLV3-10A0A075B6K4 115 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 DRGXA6NNA5 263 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 WASH3PC4AMC7 463 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 I6L893 689 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-209ENST00000557342 CCP110O43303 1012 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 EPHX1P07099 455 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 SRPRAP08240 638 aaKnown RBP12.86□□□□□ -0.35
SLIRP-209ENST00000557342 PLEKP08567 350 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-209ENST00000557342 GABRG2P18507 467 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 GGCXP38435 758 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 CSKP41240 450 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 AIF1P55008 147 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 HDAC4P56524 1084 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 NRG1Q02297 640 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-209ENST00000557342 SRSF5Q13243 272 aaKnown RBP12.86□□□□□ -0.35
SLIRP-209ENST00000557342 ARID5BQ14865 1188 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 PLEKHG6Q3KR16 790 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 SH3PXD2AQ5TCZ1 1133 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 RNF219Q5W0B1 726 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-209ENST00000557342 LAIR1Q6GTX8 287 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-209ENST00000557342 SLFN11Q7Z7L1 901 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 CIR1Q86X95 450 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-209ENST00000557342 ZNF683Q8IZ20 524 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 KDM1BQ8NB78 822 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 FNIP1Q8TF40 1166 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 DNAJC7Q99615 494 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 NCAPGQ9BPX3 1015 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 TPSD1Q9BZJ3 242 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 ZYG11BQ9C0D3 744 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 TMEM245Q9H330 911 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 RETREG1Q9H6L5 497 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 FBRSQ9HAH7 460 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 TMPRSS4Q9NRS4 437 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 ARHGAP20Q9P2F6 1191 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 NCDNQ9UBB6 729 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 PPARGC1AQ9UBK2 798 aaKnown RBP12.86□□□□□ -0.35
SLIRP-209ENST00000557342 GMEB2Q9UKD1 530 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 INTS6Q9UL03 887 aaKnown RBP12.86□□□□□ -0.35
SLIRP-209ENST00000557342 TBC1D30Q9Y2I9 924 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 RAD54BQ9Y620 910 aa12.86□□□□□ -0.35
SLIRP-209ENST00000557342 CHD5Q8TDI0 1954 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 A0A087X0T9 212 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 SSU72P8A0A1W2PR75 194 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 ATMINO43313 823 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-209ENST00000557342 SRGAP2O75044 1071 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 ZNF217O75362 1048 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 RNF8O76064 485 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 RHOBTB1O94844 696 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 FAM228BP0C875 321 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 PRKCHP24723 683 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 PSMA2P25787 234 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 NNMTP40261 264 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 ECT2LQ008S8 904 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 SCAPQ12770 1279 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 PTPRNQ16849 979 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 EFHC2Q5JST6 749 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 C6orf118Q5T5N4 469 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 CXorf57Q6NSI4 855 aaKnown RBP12.85□□□□□ -0.35
SLIRP-209ENST00000557342 KIAA1211LQ6NV74 962 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 SCYL2Q6P3W7 929 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 ALKBH5Q6P6C2 394 aaKnown RBP12.85□□□□□ -0.35
SLIRP-209ENST00000557342 TMC6Q7Z403 805 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 SETD3Q86TU7 594 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-209ENST00000557342 CNGA4Q8IV77 575 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 RUBCNQ92622 972 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 LOXL4Q96JB6 756 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 ZC3H10Q96K80 434 aaKnown RBP12.85□□□□□ -0.35
SLIRP-209ENST00000557342 HINFPQ9BQA5 517 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 RBSNQ9H1K0 784 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 DEF6Q9H4E7 631 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 CD248Q9HCU0 757 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 ABHD10Q9NUJ1 306 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 MYO1AQ9UBC5 1043 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 OR12D3Q9UGF7 316 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 ERVW-1Q9UQF0 538 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 SNX10Q9Y5X0 201 aa12.85□□□□□ -0.35
SLIRP-209ENST00000557342 NUP205Q92621 2012 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 TMEM191CA6NGB0 347 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 MFAP3LO75121 409 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 CNTN5O94779 1100 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 RHOCP08134 193 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 NDUFV2P19404 249 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms