RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 ITGB1BP2Q9UKP3 347 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 SNX14Q9Y5W7 946 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 SSC5DA1L4H1 1573 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 COL1A1P02452 1464 aaPredicted RBP4.43□□□□□ -1.7
CHD8-212ENST00000557329 PRUNE2Q8WUY3 3088 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 MED23Q9ULK4 1368 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 ZNF646O15015 1829 aaPredicted RBP4.42□□□□□ -1.7
CHD8-212ENST00000557329 TCF20Q9UGU0 1960 aaKnown RBP4.42□□□□□ -1.7
CHD8-212ENST00000557329 MUC3AQ02505 3323 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 A6NNZ2 444 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 CLCA1A8K7I4 914 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 PMPCBO75439 489 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 MT-ND5P03915 603 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 PDHA1P08559 390 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 TRIM27P14373 513 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 CAPN2P17655 700 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 PTH2RP49190 550 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 PGDP52209 483 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 PPATQ06203 517 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 TCP10Q12799 353 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 FOXF2Q12947 444 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 KRT24Q2M2I5 525 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 C3orf38Q5JPI3 329 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 SLC9A4Q6AI14 798 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 FASTKD5Q7L8L6 764 aaKnown RBP4.42□□□□□ -1.7
CHD8-212ENST00000557329 DPP9Q86TI2 863 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 SRRM1Q8IYB3 904 aaKnown RBP4.42□□□□□ -1.7
CHD8-212ENST00000557329 CERS5Q8N5B7 392 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 TERB1Q8NA31 727 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 CCDC150Q8NCX0 1101 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 DNAJB14Q8TBM8 379 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 ZBED3Q96IU2 234 aaPredicted RBP4.42□□□□□ -1.7
CHD8-212ENST00000557329 FAM227BQ96M60 508 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 ISCA1Q9BUE6 129 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 CDH23Q9H251 3354 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 CWC25Q9NXE8 425 aaPredicted RBP4.42□□□□□ -1.7
CHD8-212ENST00000557329 DNAJB11Q9UBS4 358 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 ZHX2Q9Y6X8 837 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 PFASO15067 1338 aa4.42□□□□□ -1.7
CHD8-212ENST00000557329 ANO9A1A5B4 782 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 SMIM22K7EJ46 135 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 RAB27BO00194 218 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 PQBP1O60828 265 aaKnown RBP4.41□□□□□ -1.7
CHD8-212ENST00000557329 USP12O75317 370 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 PARNO95453 639 aaKnown RBP4.41□□□□□ -1.7
CHD8-212ENST00000557329 FGAP02671 866 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 TUBB4AP04350 444 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 PARP1P09874 1014 aaKnown RBP4.41□□□□□ -1.7
CHD8-212ENST00000557329 ADORA2AP29274 412 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 CCND3P30281 292 aaPredicted RBP4.41□□□□□ -1.7
CHD8-212ENST00000557329 DGKQP52824 942 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 RIPK4P57078 832 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 TFF2Q03403 129 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 CHRNDQ07001 517 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 COLEC12Q5KU26 742 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 L1TD1Q5T7N2 865 aaKnown RBP4.41□□□□□ -1.7
CHD8-212ENST00000557329 PRAMEF17Q5VTA0 474 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 WDR78Q5VTH9 848 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 PLAG1Q6DJT9 500 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 CCSAPQ6IQ19 270 aaPredicted RBP4.41□□□□□ -1.7
CHD8-212ENST00000557329 VSTM1Q6UX27 236 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 CATSPERGQ6ZRH7 1159 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 SESTD1Q86VW0 696 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 NTN5Q8WTR8 489 aaPredicted RBP4.41□□□□□ -1.7
CHD8-212ENST00000557329 TIFAQ96CG3 184 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 REPS1Q96D71 796 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 CCDC17Q96LX7 622 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 ZBTB26Q9HCK0 441 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 NRIP3Q9NQ35 241 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 HEYLQ9NQ87 328 aaPredicted RBP4.41□□□□□ -1.7
CHD8-212ENST00000557329 TMOD4Q9NZQ9 345 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 MID2Q9UJV3 735 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 ADAM21Q9UKJ8 722 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 FRMD4BQ9Y2L6 1034 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 COL4A1P02462 1669 aa4.41□□□□□ -1.7
CHD8-212ENST00000557329 AK9Q5TCS8 1911 aa4.4□□□□□ -1.7
CHD8-212ENST00000557329 ALPK3Q96L96 1907 aa4.4□□□□□ -1.7
CHD8-212ENST00000557329 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.4□□□□□ -1.71
CHD8-212ENST00000557329 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.4□□□□□ -1.71
CHD8-212ENST00000557329 TMEM233B4DJY2 109 aa4.4□□□□□ -1.71
CHD8-212ENST00000557329 CES2O00748 559 aa4.4□□□□□ -1.71
CHD8-212ENST00000557329 ZNF213O14771 459 aa4.4□□□□□ -1.71
CHD8-212ENST00000557329 CCNT2O60583 730 aaKnown RBP4.4□□□□□ -1.71
CHD8-212ENST00000557329 RNF8O76064 485 aa4.4□□□□□ -1.71
CHD8-212ENST00000557329 PCCAP05165 728 aaPredicted RBP4.4□□□□□ -1.71
CHD8-212ENST00000557329 KRT18P05783 430 aaKnown RBP4.4□□□□□ -1.71
CHD8-212ENST00000557329 MYL4P12829 197 aa4.4□□□□□ -1.71
CHD8-212ENST00000557329 CREB1P16220 341 aa4.4□□□□□ -1.71
CHD8-212ENST00000557329 LMO1P25800 156 aa4.4□□□□□ -1.71
CHD8-212ENST00000557329 E2F1Q01094 437 aa4.4□□□□□ -1.71
CHD8-212ENST00000557329 SRSF4Q08170 494 aaKnown RBP4.4□□□□□ -1.71
CHD8-212ENST00000557329 ANO1Q5XXA6 986 aa4.4□□□□□ -1.71
CHD8-212ENST00000557329 FCRL6Q6DN72 434 aa4.4□□□□□ -1.71
CHD8-212ENST00000557329 SERPINA13PQ6UXR4 307 aa4.4□□□□□ -1.71
CHD8-212ENST00000557329 UNC13DQ70J99 1090 aa4.4□□□□□ -1.71
CHD8-212ENST00000557329 ATP11CQ8NB49 1132 aa4.4□□□□□ -1.71
CHD8-212ENST00000557329 ABHD5Q8WTS1 349 aa4.4□□□□□ -1.71
CHD8-212ENST00000557329 NAF1Q96HR8 494 aaKnown RBP4.4□□□□□ -1.71
CHD8-212ENST00000557329 HIST1H2AAQ96QV6 131 aa4.4□□□□□ -1.71
CHD8-212ENST00000557329 STARD7Q9NQZ5 370 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms