RNA–Protein interactions for RNA: ENST00000556565.5

TUBB3-212, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-212ENST00000556565 PPP1R2P3Q6NXS1 205 aa18.13■□□□□ 0.49
TUBB3-212ENST00000556565 KIAA1324Q6UXG2 1013 aaKnown RBP18.13■□□□□ 0.49
TUBB3-212ENST00000556565 MCOLN2Q8IZK6 566 aa18.13■□□□□ 0.49
TUBB3-212ENST00000556565 GPR161Q8N6U8 529 aaKnown RBP18.13■□□□□ 0.49
TUBB3-212ENST00000556565 FRMD1Q8N878 549 aa18.13■□□□□ 0.49
TUBB3-212ENST00000556565 ZNF366Q8N895 744 aa18.13■□□□□ 0.49
TUBB3-212ENST00000556565 IQCDQ96DY2 449 aa18.13■□□□□ 0.49
TUBB3-212ENST00000556565 MKRN2Q9H000 416 aaKnown RBP18.13■□□□□ 0.49
TUBB3-212ENST00000556565 MBD1Q9UIS9 605 aaPredicted RBP18.13■□□□□ 0.49
TUBB3-212ENST00000556565 USP18Q9UMW8 372 aa18.13■□□□□ 0.49
TUBB3-212ENST00000556565 PLXND1Q9Y4D7 1925 aa18.13■□□□□ 0.49
TUBB3-212ENST00000556565 SDK1Q7Z5N4 2213 aa18.13■□□□□ 0.49
TUBB3-212ENST00000556565 DMXL1Q9Y485 3027 aa18.12■□□□□ 0.49
TUBB3-212ENST00000556565 SIGLEC16A6NMB1 481 aa18.12■□□□□ 0.49
TUBB3-212ENST00000556565 TMCO5BA8MYB1 307 aa18.12■□□□□ 0.49
TUBB3-212ENST00000556565 ZNF217O75362 1048 aa18.12■□□□□ 0.49
TUBB3-212ENST00000556565 CLDN11O75508 207 aa18.12■□□□□ 0.49
TUBB3-212ENST00000556565 GPD1P21695 349 aa18.12■□□□□ 0.49
TUBB3-212ENST00000556565 RRM1P23921 792 aa18.12■□□□□ 0.49
TUBB3-212ENST00000556565 CAMK2GQ13555 558 aaPredicted RBP18.12■□□□□ 0.49
TUBB3-212ENST00000556565 SLC12A1Q13621 1099 aa18.12■□□□□ 0.49
TUBB3-212ENST00000556565 ACBD5Q5T8D3 534 aaPredicted RBP18.12■□□□□ 0.49
TUBB3-212ENST00000556565 STRADAQ7RTN6 431 aa18.12■□□□□ 0.49
TUBB3-212ENST00000556565 APCDD1Q8J025 514 aa18.12■□□□□ 0.49
TUBB3-212ENST00000556565 MRGPRX3Q96LB0 322 aa18.12■□□□□ 0.49
TUBB3-212ENST00000556565 HAPLN3Q96S86 360 aa18.12■□□□□ 0.49
TUBB3-212ENST00000556565 XPO4Q9C0E2 1151 aaKnown RBP18.12■□□□□ 0.49
TUBB3-212ENST00000556565 PRDM16Q9HAZ2 1276 aa18.12■□□□□ 0.49
TUBB3-212ENST00000556565 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.11■□□□□ 0.49
TUBB3-212ENST00000556565 ANKRD62A6NC57 917 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 DDX3XO00571 662 aaKnown RBP eCLIP18.11■□□□□ 0.492e-8■■□□□ 13.3
TUBB3-212ENST00000556565 TPM3P06753 285 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 SKILP12757 684 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 MZF1P28698 734 aaPredicted RBP18.11■□□□□ 0.49
TUBB3-212ENST00000556565 CTSOP43234 321 aaPredicted RBP18.11■□□□□ 0.49
TUBB3-212ENST00000556565 COPAP53621 1224 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 CDH4P55283 916 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 OXCT1P55809 520 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 HDAC4P56524 1084 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 ST8SIA6P61647 398 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 ZNF177Q13360 481 aaPredicted RBP18.11■□□□□ 0.49
TUBB3-212ENST00000556565 ALFQ53S48 1182 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 PPP1R15BQ5SWA1 713 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 WDR59Q6PJI9 974 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 TMPRSS6Q8IU80 811 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 RNF214Q8ND24 703 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 OR52K2Q8NGK3 314 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 OR2T3Q8NH03 318 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 FAM172AQ8WUF8 416 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 CENPIQ92674 756 aaPredicted RBP18.11■□□□□ 0.49
TUBB3-212ENST00000556565 MYO19Q96H55 970 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 VCPIP1Q96JH7 1222 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 C1orf74Q96LT6 269 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 MCEEQ96PE7 176 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 ARRDC1-AS1Q9H2J1 176 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 CD93Q9NPY3 652 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 SEMA4GQ9NTN9 838 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 CAPN11Q9UMQ6 739 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 CYP8B1Q9UNU6 501 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 PCDHGA5Q9Y5G8 931 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 ITIH6Q6UXX5 1313 aa18.11■□□□□ 0.49
TUBB3-212ENST00000556565 IGLV3-10A0A075B6K4 115 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 IGHV1OR15-9A0A0B4J2B8 117 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 E9PAM4 449 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 MAP3K13O43283 966 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 CNTN5O94779 1100 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 GYPCP04921 128 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 MPLP40238 635 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 NUMBP49757 651 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 ZNF143P52747 638 aaPredicted RBP18.1■□□□□ 0.49
TUBB3-212ENST00000556565 PLK1P53350 603 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 ZBED6P86452 979 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 ECT2LQ008S8 904 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 ARL13BQ3SXY8 428 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 TDRD12Q587J7 1177 aaKnown RBP18.1■□□□□ 0.49
TUBB3-212ENST00000556565 ARTNQ5T4W7 220 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 HGSNATQ68CP4 663 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 LRRC31Q6UY01 552 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 LPCAT2Q7L5N7 544 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 METTL3Q86U44 580 aaKnown RBP18.1■□□□□ 0.49
TUBB3-212ENST00000556565 CACUL1Q86Y37 369 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 KDM1BQ8NB78 822 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 SYN2Q92777 582 aaPredicted RBP18.1■□□□□ 0.49
TUBB3-212ENST00000556565 SIPA1Q96FS4 1042 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 PRSS16Q9NQE7 514 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 ERVW-1Q9UQF0 538 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 TBC1D30Q9Y2I9 924 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 CEP250Q9BV73 2442 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 ABCA7Q8IZY2 2146 aa18.1■□□□□ 0.49
TUBB3-212ENST00000556565 SPTBN4Q9H254 2564 aa18.09■□□□□ 0.49
TUBB3-212ENST00000556565 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.09■□□□□ 0.49
TUBB3-212ENST00000556565 DRGXA6NNA5 263 aa18.09■□□□□ 0.49
TUBB3-212ENST00000556565 CCP110O43303 1012 aa18.09■□□□□ 0.49
TUBB3-212ENST00000556565 ATMINO43313 823 aaPredicted RBP18.09■□□□□ 0.49
TUBB3-212ENST00000556565 CBFA2T2O43439 604 aa18.09■□□□□ 0.49
TUBB3-212ENST00000556565 SRPRAP08240 638 aaKnown RBP18.09■□□□□ 0.49
TUBB3-212ENST00000556565 GZMAP12544 262 aa18.09■□□□□ 0.49
TUBB3-212ENST00000556565 ADRA1BP35368 520 aa18.09■□□□□ 0.49
TUBB3-212ENST00000556565 DHPSP49366 369 aaPredicted RBP18.09■□□□□ 0.49
TUBB3-212ENST00000556565 RPL7AP62424 266 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms