RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 CCL26Q9Y258 94 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 PCDHA5Q9Y5H7 936 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 SNX14Q9Y5W7 946 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 SPEGQ15772 3267 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 IGF2RP11717 2491 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 FRYQ5TBA9 3013 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 A0A1W2PQ27 194 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 A0A1W2PQ64 194 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 A0A1W2PQC6 194 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 A0A1W2PQD8 194 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 MYMKA6NI61 221 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 CCDC169A6NNP5 214 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 XPOTO43592 962 aaKnown RBP5.19□□□□□ -1.58
ATXN3-239ENST00000556315 SH3BP5O60239 455 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 NPHS1O60500 1241 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 NEMFO60524 1076 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 TOM1L1O75674 476 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 CFIP05156 583 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 CLTAP09496 248 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 FTH1P19P0C7X4 201 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 HAPLN1P10915 354 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-239ENST00000556315 ATF6P18850 670 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 MUTP22033 750 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 RPA1P27694 616 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 KRT2P35908 639 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 ARL4AP40617 200 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 NPTX2P47972 431 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 IFNAR2P48551 515 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 PEX3P56589 373 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 CORO7P57737 925 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 LILRA4P59901 499 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 KRTAP10-2P60368 255 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 GABREP78334 506 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 DMP1Q13316 513 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-239ENST00000556315 TOB2Q14106 344 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-239ENST00000556315 MTF1Q14872 753 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 TCEA2Q15560 299 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 BMP2KLQ5H9B9 411 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 EOGTQ5NDL2 527 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 NAIF1Q69YI7 327 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-239ENST00000556315 TXNDC8Q6A555 127 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 SLC36A4Q6YBV0 504 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 RUFY3Q7L099 469 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 MAMDC2Q7Z304 686 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-239ENST00000556315 TMEM150AQ86TG1 271 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 TTC30AQ86WT1 665 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 CPNE8Q86YQ8 564 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 THEM5Q8N1Q8 247 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 MINDY1Q8N5J2 469 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 CCDC33Q8N5R6 958 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 PNPLA1Q8N8W4 532 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 LSM14AQ8ND56 463 aaKnown RBP5.19□□□□□ -1.58
ATXN3-239ENST00000556315 MDGA1Q8NFP4 955 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 MDM1Q8TC05 714 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 SPPL2BQ8TCT7 592 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 RLN3Q8WXF3 142 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 WASF1Q92558 559 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 PTPRN2Q92932 1015 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 ATP2A3Q93084 1043 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 NTPCRQ9BSD7 190 aaKnown RBP5.19□□□□□ -1.58
ATXN3-239ENST00000556315 ZCWPW1Q9H0M4 648 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 LUC7LQ9NQ29 371 aaKnown RBP5.19□□□□□ -1.58
ATXN3-239ENST00000556315 TUBGCP4Q9UGJ1 667 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 DSEQ9UL01 958 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 MMP17Q9ULZ9 603 aa5.19□□□□□ -1.58
ATXN3-239ENST00000556315 UBQLN1Q9UMX0 589 aaKnown RBP5.19□□□□□ -1.58
ATXN3-239ENST00000556315 APOBEC2Q9Y235 224 aaKnown RBP5.19□□□□□ -1.58
ATXN3-239ENST00000556315 A0A087WV48 116 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 TTC26A0AVF1 554 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 AQP7O14520 342 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 PLD2O14939 933 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 CLDN3O15551 220 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 AP5Z1O43299 807 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 NFATC1O95644 943 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 CSH1P0DML2 217 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 CSH2P0DML3 217 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 ODC1P11926 461 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 HARSP12081 509 aaKnown RBP5.18□□□□□ -1.58
ATXN3-239ENST00000556315 HMGA1P17096 107 aaKnown RBP5.18□□□□□ -1.58
ATXN3-239ENST00000556315 PRKCAP17252 672 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 NAT1P18440 290 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 HSD3B2P26439 372 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 NMT1P30419 496 aaKnown RBP5.18□□□□□ -1.58
ATXN3-239ENST00000556315 SPAG1Q07617 926 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 STRN3Q13033 797 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 STK3Q13188 491 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 KYAT1Q16773 422 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 VMACQ2NL98 169 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 SLC39A12Q504Y0 691 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 ERICH6BQ5W0A0 696 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 DBX2Q6ZNG2 339 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 TOGARAM2Q6ZUX3 1019 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 GLRX5Q86SX6 157 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 METTL23Q86XA0 190 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 EFCAB13Q8IY85 973 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 DCP1BQ8IZD4 617 aaKnown RBP5.18□□□□□ -1.58
ATXN3-239ENST00000556315 TTC9BQ8N6N2 239 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 FRMD1Q8N878 549 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 LINC01356Q8N9X3 169 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 TXNDC5Q8NBS9 432 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms