RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 BPIFB4P59827 614 aa13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 BNC1Q01954 994 aa13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 TEAD4Q15561 434 aa13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 TRIP6Q15654 476 aaKnown RBP13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 ARHGAP44Q17R89 818 aa13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 RABGAP1LQ5R372 815 aa13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 C9orf64Q5T6V5 341 aa13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 ACBD5Q5T8D3 534 aaPredicted RBP13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 RAP1GAP2Q684P5 730 aa13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 OLFML1Q6UWY5 402 aa13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 C11orf57Q6ZUT1 292 aaPredicted RBP13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 SLC26A9Q7LBE3 791 aa13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 RAB44Q7Z6P3 723 aaPredicted RBP13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 FAM124AQ86V42 546 aa13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 CACUL1Q86Y37 369 aa13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 FAM71AQ8IYT1 594 aa13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 LGI2Q8N0V4 545 aa13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 CFAP52Q8N1V2 620 aa13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 C1orf131Q8NDD1 294 aaKnown RBP13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 ZNF397Q8NF99 534 aaPredicted RBP13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 BIRC7Q96CA5 298 aa13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 CLSTN2Q9H4D0 955 aa13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 GAREM1Q9H706 876 aa13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 SIX2Q9NPC8 291 aa13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 RRN3Q9NYV6 651 aa13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 DACH1Q9UI36 760 aa13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 XPO7Q9UIA9 1087 aaKnown RBP13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 PCOLCE2Q9UKZ9 415 aa13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 SPEGQ15772 3267 aa13.12□□□□□ -0.31
HNRNPC-221ENST00000555883 C1QTNF9BB2RNN3 333 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 FLRT2O43155 660 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 DFNA5O60443 496 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 SIN3BO75182 1162 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 ADH1BP00325 375 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 C1QTNF9P0C862 333 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 CDH5P33151 784 aaPredicted RBP13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 KRT9P35527 623 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 SCNN1AP37088 669 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 NNMTP40261 264 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 USP8P40818 1118 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 MTIF2P46199 727 aaKnown RBP13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 FAM193AP78312 1265 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 ELAVL3Q14576 367 aaKnown RBP13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 TAF5Q15542 800 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 CST6Q15828 149 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 HLA-BQ31612 363 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 C5orf22Q49AR2 442 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 RNF219Q5W0B1 726 aaPredicted RBP13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 DEFB106AQ8N104 65 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 CCAR2Q8N163 923 aaKnown RBP13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 BAHD1Q8TBE0 780 aaPredicted RBP13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 ADAMTS14Q8WXS8 1223 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 IGSF8Q969P0 613 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 FAM131CQ96AQ9 280 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 ORAI3Q9BRQ5 295 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 NDST4Q9H3R1 872 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 FAM204AQ9H8W3 233 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 TM9SF3Q9HD45 589 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 TM7SF3Q9NS93 570 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 DDIT4Q9NX09 232 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 DNAJC12Q9UKB3 198 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 CEP83Q9Y592 693 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 PCDHB9Q9Y5E1 797 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 AKAP13Q12802 2813 aa13.11□□□□□ -0.31
HNRNPC-221ENST00000555883 HYAL3O43820 417 aaPredicted RBP13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 DAB1O75553 588 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 TOP3BO95985 862 aaKnown RBP13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 IGHV4-34P06331 123 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 SPINK2P20155 84 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 C5AR1P21730 350 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 NOS2P35228 1153 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 CLCN1P35523 988 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 RACK1P63244 317 aaKnown RBP13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 PITX1P78337 314 aaPredicted RBP13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 SLC6A3Q01959 620 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 APBA1Q02410 837 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 SUZ12Q15022 739 aaKnown RBP13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 TPD52L1Q16890 204 aaPredicted RBP13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 VWA3BQ502W6 1294 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 MIIPQ5JXC2 388 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 KIAA0895LQ68EN5 471 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 CXorf57Q6NSI4 855 aaKnown RBP13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 DPY19L2P1Q6NXN4 242 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 FBXL22Q6P050 247 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 MMS22LQ6ZRQ5 1243 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 FAM183BPQ6ZVS7 135 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 CREBRFQ8IUR6 639 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 SNX19Q92543 992 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 NT5C3BQ969T7 300 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 PGAP3Q96FM1 320 aaPredicted RBP13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 CDC6Q99741 560 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 TUBGCP2Q9BSJ2 902 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 KDM4CQ9H3R0 1056 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 FBXL12Q9NXK8 326 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 APOBEC2Q9Y235 224 aaKnown RBP13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 ANKRD6Q9Y2G4 727 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 FNDC3AQ9Y2H6 1198 aaKnown RBP13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 PCNX2A6NKB5 2137 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 CHD6Q8TD26 2715 aa13.1□□□□□ -0.31
HNRNPC-221ENST00000555883 ADAMTS9Q9P2N4 1935 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms